RNA–Protein interactions for RNA: ENST00000450297.1

SPTLC3-204, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 3

Gene SPTLC3, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-204ENST00000450297 MECOMQ03112 1051 aa11.94□□□□□ -0.5
SPTLC3-204ENST00000450297 TFCP2Q12800 502 aa11.94□□□□□ -0.5
SPTLC3-204ENST00000450297 MVPQ14764 893 aaKnown RBP11.94□□□□□ -0.5
SPTLC3-204ENST00000450297 RASEFQ8IZ41 740 aa11.94□□□□□ -0.5
SPTLC3-204ENST00000450297 XAGE2Q96GT9 111 aa11.94□□□□□ -0.5
SPTLC3-204ENST00000450297 DDX4Q9NQI0 724 aaKnown RBP11.94□□□□□ -0.5
SPTLC3-204ENST00000450297 RAI14Q9P0K7 980 aa11.94□□□□□ -0.5
SPTLC3-204ENST00000450297 ZBTB47Q9UFB7 747 aaPredicted RBP11.94□□□□□ -0.5
SPTLC3-204ENST00000450297 AGTPBP1Q9UPW5 1226 aa11.94□□□□□ -0.5
SPTLC3-204ENST00000450297 MROH7-TTC4A0A0A0MT08 1334 aa11.93□□□□□ -0.5
SPTLC3-204ENST00000450297 A0A1B0GUL7 405 aa11.93□□□□□ -0.5
SPTLC3-204ENST00000450297 SRGAP3O43295 1099 aa11.93□□□□□ -0.5
SPTLC3-204ENST00000450297 LDHCP07864 332 aa11.93□□□□□ -0.5
SPTLC3-204ENST00000450297 SPP2Q13103 211 aa11.93□□□□□ -0.5
SPTLC3-204ENST00000450297 IRF5Q13568 498 aa11.93□□□□□ -0.5
SPTLC3-204ENST00000450297 TREML2Q5T2D2 321 aa11.93□□□□□ -0.5
SPTLC3-204ENST00000450297 UBE2Q1Q7Z7E8 422 aa11.93□□□□□ -0.5
SPTLC3-204ENST00000450297 PXYLP1Q8TE99 480 aa11.93□□□□□ -0.5
SPTLC3-204ENST00000450297 MEIS3Q99687 375 aa11.93□□□□□ -0.5
SPTLC3-204ENST00000450297 NOL10Q9BSC4 688 aaKnown RBP11.93□□□□□ -0.5
SPTLC3-204ENST00000450297 COPRSQ9NQ92 184 aa11.93□□□□□ -0.5
SPTLC3-204ENST00000450297 ATRNL1Q5VV63 1379 aa11.92□□□□□ -0.5
SPTLC3-204ENST00000450297 PABPC4Q13310 644 aaKnown RBP eCLIP11.92□□□□□ -0.5
SPTLC3-204ENST00000450297 TBC1D9Q6ZT07 1266 aa11.92□□□□□ -0.5
SPTLC3-204ENST00000450297 FAM163AQ96GL9 167 aaPredicted RBP11.92□□□□□ -0.5
SPTLC3-204ENST00000450297 MKI67P46013 3256 aaKnown RBP11.92□□□□□ -0.5
SPTLC3-204ENST00000450297 GPR75-ASB3A0A0A6YYF3 556 aa11.91□□□□□ -0.5
SPTLC3-204ENST00000450297 GNAI3P08754 354 aa11.91□□□□□ -0.5
SPTLC3-204ENST00000450297 HMGCS2P54868 508 aa11.91□□□□□ -0.5
SPTLC3-204ENST00000450297 MAP3K10Q02779 954 aa11.91□□□□□ -0.5
SPTLC3-204ENST00000450297 NECAB2Q7Z6G3 386 aa11.91□□□□□ -0.5
SPTLC3-204ENST00000450297 TEX11Q8IYF3 940 aa11.91□□□□□ -0.5
SPTLC3-204ENST00000450297 SPATA5Q8NB90 893 aa11.91□□□□□ -0.5
SPTLC3-204ENST00000450297 ZNF280CQ8ND82 737 aa11.91□□□□□ -0.5
SPTLC3-204ENST00000450297 PAWRQ96IZ0 340 aaKnown RBP11.91□□□□□ -0.5
SPTLC3-204ENST00000450297 TRIM34Q9BYJ4 488 aa11.91□□□□□ -0.5
SPTLC3-204ENST00000450297 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.91□□□□□ -0.5
SPTLC3-204ENST00000450297 LRP2BPQ9P2M1 347 aa11.91□□□□□ -0.5
SPTLC3-204ENST00000450297 STAP2Q9UGK3 403 aa11.91□□□□□ -0.5
SPTLC3-204ENST00000450297 AK9Q5TCS8 1911 aa11.91□□□□□ -0.5
SPTLC3-204ENST00000450297 CENPFP49454 3210 aa11.91□□□□□ -0.5
SPTLC3-204ENST00000450297 PDS5AQ29RF7 1337 aaKnown RBP11.9□□□□□ -0.5
SPTLC3-204ENST00000450297 USP17L5A8MUK1 530 aa11.9□□□□□ -0.5
SPTLC3-204ENST00000450297 TBC1D12O60347 775 aa11.9□□□□□ -0.5
SPTLC3-204ENST00000450297 GCLCP48506 637 aaPredicted RBP11.9□□□□□ -0.5
SPTLC3-204ENST00000450297 RHBDL3P58872 404 aa11.9□□□□□ -0.5
SPTLC3-204ENST00000450297 FAM110CQ1W6H9 321 aa11.9□□□□□ -0.5
SPTLC3-204ENST00000450297 PI16Q6UXB8 463 aa11.9□□□□□ -0.5
SPTLC3-204ENST00000450297 CCAR1Q8IX12 1150 aaKnown RBP11.9□□□□□ -0.5
SPTLC3-204ENST00000450297 C7orf61Q8IZ16 206 aa11.9□□□□□ -0.5
SPTLC3-204ENST00000450297 PROCA1Q8NCQ7 364 aaPredicted RBP11.9□□□□□ -0.5
SPTLC3-204ENST00000450297 OSBPL5Q9H0X9 879 aaPredicted RBP11.9□□□□□ -0.5
SPTLC3-204ENST00000450297 AS3MTQ9HBK9 375 aa11.9□□□□□ -0.5
SPTLC3-204ENST00000450297 HMG20BQ9P0W2 317 aa11.9□□□□□ -0.5
SPTLC3-204ENST00000450297 TRIOBPQ9H2D6 2365 aa11.89□□□□□ -0.51
SPTLC3-204ENST00000450297 HMGCRP04035 888 aa11.89□□□□□ -0.51
SPTLC3-204ENST00000450297 CT47B1P0C2W7 299 aaPredicted RBP11.89□□□□□ -0.51
SPTLC3-204ENST00000450297 CAPN2P17655 700 aa11.89□□□□□ -0.51
SPTLC3-204ENST00000450297 CAP2P40123 477 aa11.89□□□□□ -0.51
SPTLC3-204ENST00000450297 NUBP1P53384 320 aa11.89□□□□□ -0.51
SPTLC3-204ENST00000450297 IRX3P78415 501 aaPredicted RBP11.89□□□□□ -0.51
SPTLC3-204ENST00000450297 G3BP1Q13283 466 aaKnown RBP eCLIP11.89□□□□□ -0.51
SPTLC3-204ENST00000450297 SLC17A8Q8NDX2 589 aa11.89□□□□□ -0.51
SPTLC3-204ENST00000450297 DIS3LQ8TF46 1054 aaKnown RBP11.89□□□□□ -0.51
SPTLC3-204ENST00000450297 ASCC2Q9H1I8 757 aaPredicted RBP11.89□□□□□ -0.51
SPTLC3-204ENST00000450297 PAK6Q9NQU5 681 aaPredicted RBP11.89□□□□□ -0.51
SPTLC3-204ENST00000450297 TMOD4Q9NZQ9 345 aa11.89□□□□□ -0.51
SPTLC3-204ENST00000450297 CEP290O15078 2479 aa11.89□□□□□ -0.51
SPTLC3-204ENST00000450297 RFX7Q2KHR2 1363 aa11.89□□□□□ -0.51
SPTLC3-204ENST00000450297 BAG3O95817 575 aa11.88□□□□□ -0.51
SPTLC3-204ENST00000450297 MAP4K4O95819 1239 aaPredicted RBP11.88□□□□□ -0.51
SPTLC3-204ENST00000450297 UQCRFS1P1P0C7P4 283 aa11.88□□□□□ -0.51
SPTLC3-204ENST00000450297 CRACR2BQ8N4Y2 399 aaPredicted RBP11.88□□□□□ -0.51
SPTLC3-204ENST00000450297 SH3RF3Q8TEJ3 882 aaPredicted RBP11.88□□□□□ -0.51
SPTLC3-204ENST00000450297 NSUN4Q96CB9 384 aaKnown RBP11.88□□□□□ -0.51
SPTLC3-204ENST00000450297 TBC1D2Q9BYX2 928 aa11.88□□□□□ -0.51
SPTLC3-204ENST00000450297 CRISPLD2Q9H0B8 497 aa11.88□□□□□ -0.51
SPTLC3-204ENST00000450297 CWC22Q9HCG8 908 aaKnown RBP11.88□□□□□ -0.51
SPTLC3-204ENST00000450297 HMX1Q9NP08 348 aaPredicted RBP11.88□□□□□ -0.51
SPTLC3-204ENST00000450297 ZMYND8Q9ULU4 1186 aaPredicted RBP11.88□□□□□ -0.51
SPTLC3-204ENST00000450297 A0A1W2PPC1 479 aa11.87□□□□□ -0.51
SPTLC3-204ENST00000450297 CYP2B6P20813 491 aa11.87□□□□□ -0.51
SPTLC3-204ENST00000450297 OS9Q13438 667 aaPredicted RBP11.87□□□□□ -0.51
SPTLC3-204ENST00000450297 MTMR2Q13614 643 aa11.87□□□□□ -0.51
SPTLC3-204ENST00000450297 NAA16Q6N069 864 aaPredicted RBP11.87□□□□□ -0.51
SPTLC3-204ENST00000450297 ZNF384Q8TF68 577 aa11.87□□□□□ -0.51
SPTLC3-204ENST00000450297 FRAT1Q92837 279 aaPredicted RBP11.87□□□□□ -0.51
SPTLC3-204ENST00000450297 MS4A3Q96HJ5 214 aa11.87□□□□□ -0.51
SPTLC3-204ENST00000450297 LRCH3Q96II8 777 aa11.87□□□□□ -0.51
SPTLC3-204ENST00000450297 NBPF3Q9H094 633 aa11.87□□□□□ -0.51
SPTLC3-204ENST00000450297 PRO3102Q9H379 93 aa11.87□□□□□ -0.51
SPTLC3-204ENST00000450297 SNRKQ9NRH2 765 aa11.87□□□□□ -0.51
SPTLC3-204ENST00000450297 PI4KBQ9UBF8 816 aa11.87□□□□□ -0.51
SPTLC3-204ENST00000450297 HERC5Q9UII4 1024 aaKnown RBP11.87□□□□□ -0.51
SPTLC3-204ENST00000450297 SOX1O00570 391 aaPredicted RBP11.86□□□□□ -0.51
SPTLC3-204ENST00000450297 IPO8O15397 1037 aaKnown RBP11.86□□□□□ -0.51
SPTLC3-204ENST00000450297 GNAI2P04899 355 aa11.86□□□□□ -0.51
SPTLC3-204ENST00000450297 PLCG2P16885 1265 aa11.86□□□□□ -0.51
SPTLC3-204ENST00000450297 SYN1P17600 705 aa11.86□□□□□ -0.51
SPTLC3-204ENST00000450297 RARSP54136 660 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms