RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 SMTNP53814 917 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 EIF3BP55884 814 aaKnown RBP2.46□□□□□ -2.02
USP53-202ENST00000450251 NLRP12P59046 1061 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 RAB15P59190 212 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 ST5P78524 1137 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 SEMA3FQ13275 785 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 BIRC3Q13489 604 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 PREPLQ4J6C6 727 aaPredicted RBP2.46□□□□□ -2.02
USP53-202ENST00000450251 NUTM2DQ5VT03 806 aaPredicted RBP2.46□□□□□ -2.02
USP53-202ENST00000450251 EMBQ6PCB8 327 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 SLC4A10Q6U841 1118 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 GAS2L3Q86XJ1 694 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 NUTM2AQ8IVF1 878 aaPredicted RBP2.46□□□□□ -2.02
USP53-202ENST00000450251 RBM12BQ8IXT5 1001 aaKnown RBP2.46□□□□□ -2.02
USP53-202ENST00000450251 HAUS8Q9BT25 410 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 LRRC27Q9C0I9 530 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 DNAJC25Q9H1X3 360 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 BICC1Q9H694 974 aaKnown RBP2.46□□□□□ -2.02
USP53-202ENST00000450251 KCND1Q9NSA2 647 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 FGFR1OP2Q9NVK5 253 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 TMEM63CQ9P1W3 806 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 POLKQ9UBT6 870 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 CTNNAL1Q9UBT7 734 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 EID1Q9Y6B2 187 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 DNMT1P26358 1616 aaKnown RBP2.46□□□□□ -2.02
USP53-202ENST00000450251 MYOM2P54296 1465 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 RTEL1-TNFRSF6BF6WH68 1400 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 POGZQ7Z3K3 1410 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 ANKRD50Q9ULJ7 1429 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 GOLGA8AA7E2F4 631 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 GOLGA8BA8MQT2 603 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 TRIM37O94972 964 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 KIF5AQ12840 1032 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 CUL4BQ13620 913 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 CYLC2Q14093 348 aaPredicted RBP2.46□□□□□ -2.02
USP53-202ENST00000450251 ADRM1Q16186 407 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 USH1GQ495M9 461 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 SLC44A4Q53GD3 710 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 NLRP9Q7RTR0 991 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 YTHDF3Q7Z739 585 aaKnown RBP2.46□□□□□ -2.02
USP53-202ENST00000450251 TRIM22Q8IYM9 498 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 KIFAP3Q92845 792 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 SELENOSQ9BQE4 189 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 LLPHQ9BRT6 129 aaKnown RBP2.46□□□□□ -2.02
USP53-202ENST00000450251 NUF2Q9BZD4 464 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 KRT23Q9C075 422 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 DNAI2Q9GZS0 605 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 SYNCQ9H7C4 482 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 RMI1Q9H9A7 625 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 STAG3Q9UJ98 1225 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 PYCARDQ9ULZ3 195 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 SSBP05455 408 aaKnown RBP eCLIP2.45□□□□□ -2.02
USP53-202ENST00000450251 RHOXF2BP0C7M4 288 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 GHRP10912 638 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 ROR2Q01974 943 aaKnown RBP2.45□□□□□ -2.02
USP53-202ENST00000450251 MKRN3Q13064 507 aaKnown RBP2.45□□□□□ -2.02
USP53-202ENST00000450251 MTA1Q13330 715 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 RGL3Q3MIN7 710 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 CCDC102BQ68D86 513 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 RUFY3Q7L099 469 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 PNMA8AQ86V59 439 aaPredicted RBP2.45□□□□□ -2.02
USP53-202ENST00000450251 CROCCP3Q8IVE0 287 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 CKAP2LQ8IYA6 745 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 EXOC8Q8IYI6 725 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 CASP10Q92851 521 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 MCUR1Q96AQ8 359 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 RHOXF2Q9BQY4 288 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 VCPKMTQ9H867 229 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 KLHL14Q9P2G3 628 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 STOML1Q9UBI4 398 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 ATP6V0A2Q9Y487 856 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.45□□□□□ -2.02
USP53-202ENST00000450251 UBN2Q6ZU65 1347 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 SENP3-EIF4A1A0A087X0R7 540 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 IKBKBO14920 756 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 KRT6AP02538 564 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 KRT6BP04259 564 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 HNRNPCP07910 306 aaKnown RBP eCLIP2.45□□□□□ -2.02
USP53-202ENST00000450251 KRT2P35908 639 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 MRPL12P52815 198 aaKnown RBP2.45□□□□□ -2.02
USP53-202ENST00000450251 CCDC184Q52MB2 194 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 CCDC93Q567U6 631 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 MYSM1Q5VVJ2 828 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 CWC27Q6UX04 472 aaKnown RBP2.45□□□□□ -2.02
USP53-202ENST00000450251 RSPH3Q86UC2 560 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 MYLK4Q86YV6 388 aaPredicted RBP2.45□□□□□ -2.02
USP53-202ENST00000450251 ZNF710Q8N1W2 664 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 TCP11L2Q8N4U5 519 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 B4GALNT2Q8NHY0 566 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 CXorf38Q8TB03 319 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 GPT2Q8TD30 523 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 USP26Q9BXU7 913 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 RAB17Q9H0T7 212 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 DACT1Q9NYF0 836 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 PPP2R2CQ9Y2T4 447 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 A0A1W2PRG0 241 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 TBKBP1A7MCY6 615 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 PDLIM1O00151 329 aa2.45□□□□□ -2.02
USP53-202ENST00000450251 ACTN4O43707 911 aaKnown RBP2.45□□□□□ -2.02
USP53-202ENST00000450251 GLRX3O76003 335 aaKnown RBP2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms