RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 ADKP55263 362 aaKnown RBP12.97□□□□□ -0.33
SYVN1-204ENST00000449943 RASGRF1Q13972 1273 aa12.97□□□□□ -0.33
SYVN1-204ENST00000449943 UBXN4Q92575 508 aa12.97□□□□□ -0.33
SYVN1-204ENST00000449943 ZNF446Q9NWS9 450 aa12.97□□□□□ -0.33
SYVN1-204ENST00000449943 MAN1B1Q9UKM7 699 aa12.97□□□□□ -0.33
SYVN1-204ENST00000449943 NFE2L3Q9Y4A8 694 aa12.97□□□□□ -0.33
SYVN1-204ENST00000449943 CCP110O43303 1012 aa12.97□□□□□ -0.33
SYVN1-204ENST00000449943 WTAPQ15007 396 aa12.97□□□□□ -0.33
SYVN1-204ENST00000449943 POSTNQ15063 836 aa12.97□□□□□ -0.33
SYVN1-204ENST00000449943 HOOK1Q9UJC3 728 aaKnown RBP12.97□□□□□ -0.33
SYVN1-204ENST00000449943 TNS2Q63HR2 1409 aa12.97□□□□□ -0.33
SYVN1-204ENST00000449943 FMNL1O95466 1100 aaPredicted RBP12.97□□□□□ -0.33
SYVN1-204ENST00000449943 FMR1Q06787 632 aaKnown RBP eCLIP12.97□□□□□ -0.33
SYVN1-204ENST00000449943 DHX8Q14562 1220 aaKnown RBP12.97□□□□□ -0.33
SYVN1-204ENST00000449943 LCORLQ8N3X6 602 aa12.97□□□□□ -0.33
SYVN1-204ENST00000449943 PCDHB6Q9Y5E3 794 aa12.97□□□□□ -0.33
SYVN1-204ENST00000449943 CDHR2Q9BYE9 1310 aa12.97□□□□□ -0.33
SYVN1-204ENST00000449943 PLEKHG2Q9H7P9 1386 aa12.96□□□□□ -0.33
SYVN1-204ENST00000449943 hCG_1642624A0A1W2PR95 340 aa12.96□□□□□ -0.33
SYVN1-204ENST00000449943 PDE8AO60658 829 aa12.96□□□□□ -0.33
SYVN1-204ENST00000449943 AKNAD1Q5T1N1 836 aa12.96□□□□□ -0.33
SYVN1-204ENST00000449943 LPIN2Q92539 896 aa12.96□□□□□ -0.33
SYVN1-204ENST00000449943 SMARCE1Q969G3 411 aa12.96□□□□□ -0.33
SYVN1-204ENST00000449943 CARD6Q9BX69 1037 aa12.96□□□□□ -0.33
SYVN1-204ENST00000449943 NACAP1Q9BZK3 213 aa12.96□□□□□ -0.33
SYVN1-204ENST00000449943 MINDY4BA8MYZ0 360 aa12.96□□□□□ -0.33
SYVN1-204ENST00000449943 KIF20AO95235 890 aa12.96□□□□□ -0.33
SYVN1-204ENST00000449943 MMP1P03956 469 aa12.96□□□□□ -0.33
SYVN1-204ENST00000449943 SLC5A1P13866 664 aa12.96□□□□□ -0.33
SYVN1-204ENST00000449943 KLHL10Q6JEL2 608 aa12.96□□□□□ -0.33
SYVN1-204ENST00000449943 SGMS1Q86VZ5 419 aa12.96□□□□□ -0.33
SYVN1-204ENST00000449943 WASF1Q92558 559 aa12.96□□□□□ -0.33
SYVN1-204ENST00000449943 INTS13Q9NVM9 706 aa12.96□□□□□ -0.33
SYVN1-204ENST00000449943 ARID4AP29374 1257 aaPredicted RBP12.96□□□□□ -0.33
SYVN1-204ENST00000449943 TOB1P50616 345 aaPredicted RBP12.96□□□□□ -0.33
SYVN1-204ENST00000449943 CLCN6P51797 869 aa12.96□□□□□ -0.33
SYVN1-204ENST00000449943 GABPB1Q06547 395 aaPredicted RBP12.96□□□□□ -0.33
SYVN1-204ENST00000449943 DZIP3Q86Y13 1208 aaKnown RBP12.96□□□□□ -0.33
SYVN1-204ENST00000449943 OXER1Q8TDS5 423 aa12.96□□□□□ -0.33
SYVN1-204ENST00000449943 EPC1Q9H2F5 836 aa12.96□□□□□ -0.34
SYVN1-204ENST00000449943 CABP5Q9NP86 173 aa12.96□□□□□ -0.34
SYVN1-204ENST00000449943 SEC31BQ9NQW1 1179 aa12.96□□□□□ -0.34
SYVN1-204ENST00000449943 C4AP0C0L4 1744 aa12.95□□□□□ -0.34
SYVN1-204ENST00000449943 C4BP0C0L5 1744 aa12.95□□□□□ -0.34
SYVN1-204ENST00000449943 TULP1O00294 542 aaPredicted RBP12.95□□□□□ -0.34
SYVN1-204ENST00000449943 GNG11P61952 73 aa12.95□□□□□ -0.34
SYVN1-204ENST00000449943 CCDC93Q567U6 631 aa12.95□□□□□ -0.34
SYVN1-204ENST00000449943 USP49Q70CQ1 688 aa12.95□□□□□ -0.34
SYVN1-204ENST00000449943 BAG1Q99933 345 aaPredicted RBP12.95□□□□□ -0.34
SYVN1-204ENST00000449943 DESI2Q9BSY9 194 aa12.95□□□□□ -0.34
SYVN1-204ENST00000449943 TRIM34Q9BYJ4 488 aa12.95□□□□□ -0.34
SYVN1-204ENST00000449943 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.95□□□□□ -0.34
SYVN1-204ENST00000449943 PPP2R2CQ9Y2T4 447 aa12.95□□□□□ -0.34
SYVN1-204ENST00000449943 PARP4Q9UKK3 1724 aaKnown RBP12.95□□□□□ -0.34
SYVN1-204ENST00000449943 ERICH4A6NGS2 130 aa12.95□□□□□ -0.34
SYVN1-204ENST00000449943 ZSCAN12O43309 604 aa12.95□□□□□ -0.34
SYVN1-204ENST00000449943 BCAMP50895 628 aa12.95□□□□□ -0.34
SYVN1-204ENST00000449943 KRT23Q9C075 422 aa12.95□□□□□ -0.34
SYVN1-204ENST00000449943 LRP2BPQ9P2M1 347 aa12.95□□□□□ -0.34
SYVN1-204ENST00000449943 GSG1L2A8MUP6 293 aa12.95□□□□□ -0.34
SYVN1-204ENST00000449943 IFNAR1P17181 557 aa12.95□□□□□ -0.34
SYVN1-204ENST00000449943 LIFRP42702 1097 aa12.95□□□□□ -0.34
SYVN1-204ENST00000449943 AFMP43652 599 aa12.95□□□□□ -0.34
SYVN1-204ENST00000449943 KCNJ6P48051 423 aa12.95□□□□□ -0.34
SYVN1-204ENST00000449943 CNNM2Q9H8M5 875 aa12.95□□□□□ -0.34
SYVN1-204ENST00000449943 SAMSN1Q9NSI8 373 aaKnown RBP12.95□□□□□ -0.34
SYVN1-204ENST00000449943 KAT6BQ8WYB5 2073 aa12.95□□□□□ -0.34
SYVN1-204ENST00000449943 FANCGO15287 622 aa12.94□□□□□ -0.34
SYVN1-204ENST00000449943 KARSQ15046 597 aaKnown RBP12.94□□□□□ -0.34
SYVN1-204ENST00000449943 TOGARAM2Q6ZUX3 1019 aa12.94□□□□□ -0.34
SYVN1-204ENST00000449943 REXO1L1PQ8IX06 675 aa12.94□□□□□ -0.34
SYVN1-204ENST00000449943 DHX58Q96C10 678 aa12.94□□□□□ -0.34
SYVN1-204ENST00000449943 ZNF512BQ96KM6 892 aaPredicted RBP12.94□□□□□ -0.34
SYVN1-204ENST00000449943 UBAC1Q9BSL1 405 aa12.94□□□□□ -0.34
SYVN1-204ENST00000449943 FBXO2Q9UK22 296 aaPredicted RBP12.94□□□□□ -0.34
SYVN1-204ENST00000449943 UBR2Q8IWV8 1755 aa12.94□□□□□ -0.34
SYVN1-204ENST00000449943 STX17P56962 302 aa12.94□□□□□ -0.34
SYVN1-204ENST00000449943 TRIM65Q6PJ69 517 aa12.94□□□□□ -0.34
SYVN1-204ENST00000449943 SLC4A9Q96Q91 983 aa12.94□□□□□ -0.34
SYVN1-204ENST00000449943 ABCF2Q9UG63 623 aa12.94□□□□□ -0.34
SYVN1-204ENST00000449943 PHLPP2Q6ZVD8 1323 aa12.94□□□□□ -0.34
SYVN1-204ENST00000449943 ATRNO75882 1429 aa12.94□□□□□ -0.34
SYVN1-204ENST00000449943 FAM205CA6NFA0 338 aa12.94□□□□□ -0.34
SYVN1-204ENST00000449943 MARCH6O60337 910 aa12.94□□□□□ -0.34
SYVN1-204ENST00000449943 SLFN14P0C7P3 912 aa12.94□□□□□ -0.34
SYVN1-204ENST00000449943 CPLX3Q8WVH0 158 aa12.94□□□□□ -0.34
SYVN1-204ENST00000449943 DCCP43146 1447 aa12.94□□□□□ -0.34
SYVN1-204ENST00000449943 CASP1P29466 404 aa12.94□□□□□ -0.34
SYVN1-204ENST00000449943 SDR42E1Q8WUS8 393 aa12.94□□□□□ -0.34
SYVN1-204ENST00000449943 CSRNP2Q9H175 543 aa12.94□□□□□ -0.34
SYVN1-204ENST00000449943 ARHGAP6O43182 974 aa12.93□□□□□ -0.34
SYVN1-204ENST00000449943 CYP19A1P11511 503 aaPredicted RBP12.93□□□□□ -0.34
SYVN1-204ENST00000449943 CASQ1P31415 396 aa12.93□□□□□ -0.34
SYVN1-204ENST00000449943 BMS1Q14692 1282 aaKnown RBP12.93□□□□□ -0.34
SYVN1-204ENST00000449943 STK36Q9NRP7 1315 aa12.93□□□□□ -0.34
SYVN1-204ENST00000449943 FAM237AA0A1B0GTK4 181 aa12.93□□□□□ -0.34
SYVN1-204ENST00000449943 VWA3AA6NCI4 1184 aa12.93□□□□□ -0.34
SYVN1-204ENST00000449943 SMIM22K7EJ46 135 aa12.93□□□□□ -0.34
SYVN1-204ENST00000449943 PRDM1O75626 825 aa12.93□□□□□ -0.34
SYVN1-204ENST00000449943 SEC31AO94979 1220 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms