RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 HMX1Q9NP08 348 aaPredicted RBP22.29■■□□□ 1.16
CHCHD3-203ENST00000448878 COPRSQ9NQ92 184 aa22.29■■□□□ 1.16
CHCHD3-203ENST00000448878 PTPRFP10586 1907 aa22.28■■□□□ 1.16
CHCHD3-203ENST00000448878 GPR75-ASB3A0A0A6YYF3 556 aa22.28■■□□□ 1.16
CHCHD3-203ENST00000448878 ZNF316A6NFI3 1004 aaPredicted RBP22.28■■□□□ 1.16
CHCHD3-203ENST00000448878 TBC1D12O60347 775 aa22.28■■□□□ 1.16
CHCHD3-203ENST00000448878 HMGCRP04035 888 aa22.28■■□□□ 1.16
CHCHD3-203ENST00000448878 LDHCP07864 332 aa22.28■■□□□ 1.16
CHCHD3-203ENST00000448878 GCLCP48506 637 aaPredicted RBP22.28■■□□□ 1.16
CHCHD3-203ENST00000448878 GSTO1P78417 241 aa22.28■■□□□ 1.16
CHCHD3-203ENST00000448878 TFCP2Q12800 502 aa22.28■■□□□ 1.16
CHCHD3-203ENST00000448878 RAI14Q9P0K7 980 aa22.28■■□□□ 1.16
CHCHD3-203ENST00000448878 PHIPQ8WWQ0 1821 aa22.28■■□□□ 1.16
CHCHD3-203ENST00000448878 RHBDL3P58872 404 aa22.27■■□□□ 1.16
CHCHD3-203ENST00000448878 CDCA7LQ96GN5 454 aa22.27■■□□□ 1.16
CHCHD3-203ENST00000448878 API5Q9BZZ5 524 aaKnown RBP22.27■■□□□ 1.16
CHCHD3-203ENST00000448878 USP17L5A8MUK1 530 aa22.26■■□□□ 1.15
CHCHD3-203ENST00000448878 TBC1D9Q6ZT07 1266 aa22.26■■□□□ 1.15
CHCHD3-203ENST00000448878 MEIS3Q99687 375 aa22.26■■□□□ 1.15
CHCHD3-203ENST00000448878 NBPF3Q9H094 633 aa22.26■■□□□ 1.15
CHCHD3-203ENST00000448878 ASCC2Q9H1I8 757 aaPredicted RBP22.26■■□□□ 1.15
CHCHD3-203ENST00000448878 AS3MTQ9HBK9 375 aa22.26■■□□□ 1.15
CHCHD3-203ENST00000448878 PDS5AQ29RF7 1337 aaKnown RBP22.26■■□□□ 1.15
CHCHD3-203ENST00000448878 RPTORQ8N122 1335 aa22.26■■□□□ 1.15
CHCHD3-203ENST00000448878 SRGAP3O43295 1099 aa22.25■■□□□ 1.15
CHCHD3-203ENST00000448878 SYN1P17600 705 aa22.25■■□□□ 1.15
CHCHD3-203ENST00000448878 CYP2B6P20813 491 aa22.25■■□□□ 1.15
CHCHD3-203ENST00000448878 CAP2P40123 477 aa22.25■■□□□ 1.15
CHCHD3-203ENST00000448878 TRIM32Q13049 653 aa22.25■■□□□ 1.15
CHCHD3-203ENST00000448878 ANKLE1Q8NAG6 615 aa22.25■■□□□ 1.15
CHCHD3-203ENST00000448878 NOL10Q9BSC4 688 aaKnown RBP22.25■■□□□ 1.15
CHCHD3-203ENST00000448878 RANBP2P49792 3224 aaKnown RBP22.25■■□□□ 1.15
CHCHD3-203ENST00000448878 IRX3P78415 501 aaPredicted RBP22.24■■□□□ 1.15
CHCHD3-203ENST00000448878 PI16Q6UXB8 463 aa22.24■■□□□ 1.15
CHCHD3-203ENST00000448878 TEX11Q8IYF3 940 aa22.24■■□□□ 1.15
CHCHD3-203ENST00000448878 TBC1D2Q9BYX2 928 aa22.24■■□□□ 1.15
CHCHD3-203ENST00000448878 HMG20BQ9P0W2 317 aa22.24■■□□□ 1.15
CHCHD3-203ENST00000448878 DOCK3Q8IZD9 2030 aa22.23■■□□□ 1.15
CHCHD3-203ENST00000448878 CCAR1Q8IX12 1150 aaKnown RBP22.23■■□□□ 1.15
CHCHD3-203ENST00000448878 SPATA5Q8NB90 893 aa22.23■■□□□ 1.15
CHCHD3-203ENST00000448878 ZNF384Q8TF68 577 aa22.23■■□□□ 1.15
CHCHD3-203ENST00000448878 NSUN4Q96CB9 384 aaKnown RBP22.23■■□□□ 1.15
CHCHD3-203ENST00000448878 C11orf49Q9H6J7 331 aa22.23■■□□□ 1.15
CHCHD3-203ENST00000448878 TMOD4Q9NZQ9 345 aa22.23■■□□□ 1.15
CHCHD3-203ENST00000448878 LRP2BPQ9P2M1 347 aa22.23■■□□□ 1.15
CHCHD3-203ENST00000448878 GJD2Q9UKL4 321 aa22.23■■□□□ 1.15
CHCHD3-203ENST00000448878 ZBTB22O15209 634 aa22.22■■□□□ 1.15
CHCHD3-203ENST00000448878 NPM3O75607 178 aaKnown RBP22.22■■□□□ 1.15
CHCHD3-203ENST00000448878 RRP1BQ14684 758 aaKnown RBP22.22■■□□□ 1.15
CHCHD3-203ENST00000448878 GDF15Q99988 308 aa22.22■■□□□ 1.15
CHCHD3-203ENST00000448878 MAP4K4O95819 1239 aaPredicted RBP22.21■■□□□ 1.15
CHCHD3-203ENST00000448878 BMP8BP34820 402 aa22.21■■□□□ 1.15
CHCHD3-203ENST00000448878 MTMR2Q13614 643 aa22.21■■□□□ 1.15
CHCHD3-203ENST00000448878 DEFB123Q8N688 67 aa22.21■■□□□ 1.15
CHCHD3-203ENST00000448878 TRIM34Q9BYJ4 488 aa22.21■■□□□ 1.15
CHCHD3-203ENST00000448878 GNAI3P08754 354 aa22.2■■□□□ 1.14
CHCHD3-203ENST00000448878 SH3D19Q5HYK7 790 aa22.2■■□□□ 1.14
CHCHD3-203ENST00000448878 SH3RF3Q8TEJ3 882 aaPredicted RBP22.2■■□□□ 1.14
CHCHD3-203ENST00000448878 TRIB2Q92519 343 aa22.2■■□□□ 1.14
CHCHD3-203ENST00000448878 NUDT12Q9BQG2 462 aa22.2■■□□□ 1.14
CHCHD3-203ENST00000448878 PI4KBQ9UBF8 816 aa22.2■■□□□ 1.14
CHCHD3-203ENST00000448878 HERC5Q9UII4 1024 aaKnown RBP22.2■■□□□ 1.14
CHCHD3-203ENST00000448878 ATAD5Q96QE3 1844 aa22.2■■□□□ 1.14
CHCHD3-203ENST00000448878 ALPK3Q96L96 1907 aa22.19■■□□□ 1.14
CHCHD3-203ENST00000448878 PEX10O60683 326 aa22.19■■□□□ 1.14
CHCHD3-203ENST00000448878 CRACR2BQ8N4Y2 399 aaPredicted RBP22.19■■□□□ 1.14
CHCHD3-203ENST00000448878 P2RX7Q99572 595 aaKnown RBP22.19■■□□□ 1.14
CHCHD3-203ENST00000448878 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.19■■□□□ 1.14
CHCHD3-203ENST00000448878 PRKAR2AP13861 404 aaKnown RBP22.18■■□□□ 1.14
CHCHD3-203ENST00000448878 MAGEA10P43363 369 aaPredicted RBP22.18■■□□□ 1.14
CHCHD3-203ENST00000448878 G3BP1Q13283 466 aaKnown RBP eCLIP22.18■■□□□ 1.141e-7■■■□□ 15.2
CHCHD3-203ENST00000448878 PDE3AQ14432 1141 aa22.18■■□□□ 1.14
CHCHD3-203ENST00000448878 Q7L0L9 218 aa22.18■■□□□ 1.14
CHCHD3-203ENST00000448878 GPRC5AQ8NFJ5 357 aa22.18■■□□□ 1.14
CHCHD3-203ENST00000448878 UBE2OQ9C0C9 1292 aaKnown RBP22.18■■□□□ 1.14
CHCHD3-203ENST00000448878 CWC22Q9HCG8 908 aaKnown RBP22.18■■□□□ 1.14
CHCHD3-203ENST00000448878 AATFQ9NY61 560 aaKnown RBP eCLIP22.18■■□□□ 1.14
CHCHD3-203ENST00000448878 MORF4L1Q9UBU8 362 aa22.18■■□□□ 1.14
CHCHD3-203ENST00000448878 LOC285556D6RIA3 1793 aa22.17■■□□□ 1.14
CHCHD3-203ENST00000448878 BAG3O95817 575 aa22.17■■□□□ 1.14
CHCHD3-203ENST00000448878 ASNSP08243 561 aa22.17■■□□□ 1.14
CHCHD3-203ENST00000448878 BACE1P56817 501 aa22.17■■□□□ 1.14
CHCHD3-203ENST00000448878 NAA16Q6N069 864 aaPredicted RBP22.17■■□□□ 1.14
CHCHD3-203ENST00000448878 DHX36Q9H2U1 1008 aaKnown RBP22.17■■□□□ 1.14
CHCHD3-203ENST00000448878 OGDHLQ9ULD0 1010 aa22.17■■□□□ 1.14
CHCHD3-203ENST00000448878 UQCRFS1P1P0C7P4 283 aa22.16■■□□□ 1.14
CHCHD3-203ENST00000448878 MCAMP43121 646 aa22.16■■□□□ 1.14
CHCHD3-203ENST00000448878 HERVK_113P62684 666 aa22.16■■□□□ 1.14
CHCHD3-203ENST00000448878 MAPKAPK5Q8IW41 473 aa22.16■■□□□ 1.14
CHCHD3-203ENST00000448878 TDHQ8IZJ6 230 aa22.16■■□□□ 1.14
CHCHD3-203ENST00000448878 TGFBRAP1Q8WUH2 860 aa22.16■■□□□ 1.14
CHCHD3-203ENST00000448878 PAGR1Q9BTK6 254 aa22.16■■□□□ 1.14
CHCHD3-203ENST00000448878 WDR18Q9BV38 432 aa22.16■■□□□ 1.14
CHCHD3-203ENST00000448878 SNRKQ9NRH2 765 aa22.16■■□□□ 1.14
CHCHD3-203ENST00000448878 DDX60LQ5H9U9 1706 aaKnown RBP22.16■■□□□ 1.14
CHCHD3-203ENST00000448878 COL2A1P02458 1487 aaPredicted RBP22.15■■□□□ 1.14
CHCHD3-203ENST00000448878 USP17L10C9JJH3 530 aa22.15■■□□□ 1.14
CHCHD3-203ENST00000448878 GDF11O95390 407 aa22.15■■□□□ 1.14
CHCHD3-203ENST00000448878 CT47B1P0C2W7 299 aaPredicted RBP22.15■■□□□ 1.14
CHCHD3-203ENST00000448878 ZKSCAN1P17029 563 aaPredicted RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms