RNA–Protein interactions for RNA: ENST00000448732.1

R3HDM2-208, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-208ENST00000448732 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.51■■■□□ 2.15
R3HDM2-208ENST00000448732 BRCA2P51587 3418 aa28.5■■■□□ 2.15
R3HDM2-208ENST00000448732 MYCP01106 439 aaPredicted RBP28.5■■■□□ 2.15
R3HDM2-208ENST00000448732 PLCG2P16885 1265 aa28.5■■■□□ 2.15
R3HDM2-208ENST00000448732 FCGRTP55899 365 aa28.5■■■□□ 2.15
R3HDM2-208ENST00000448732 CCDC84Q86UT8 332 aaPredicted RBP28.49■■■□□ 2.15
R3HDM2-208ENST00000448732 RAET1EQ8TD07 263 aa28.49■■■□□ 2.15
R3HDM2-208ENST00000448732 DHX36Q9H2U1 1008 aaKnown RBP28.49■■■□□ 2.15
R3HDM2-208ENST00000448732 AATFQ9NY61 560 aaKnown RBP eCLIP28.49■■■□□ 2.15
R3HDM2-208ENST00000448732 PI4KBQ9UBF8 816 aa28.49■■■□□ 2.15
R3HDM2-208ENST00000448732 HERC5Q9UII4 1024 aaKnown RBP28.49■■■□□ 2.15
R3HDM2-208ENST00000448732 DBNLQ9UJU6 430 aaKnown RBP28.49■■■□□ 2.15
R3HDM2-208ENST00000448732 AGTPBP1Q9UPW5 1226 aa28.49■■■□□ 2.15
R3HDM2-208ENST00000448732 MYPNQ86TC9 1320 aa28.48■■■□□ 2.15
R3HDM2-208ENST00000448732 GRK4P32298 578 aa28.48■■■□□ 2.15
R3HDM2-208ENST00000448732 CAP2P40123 477 aa28.48■■■□□ 2.15
R3HDM2-208ENST00000448732 ZAP70P43403 619 aa28.48■■■□□ 2.15
R3HDM2-208ENST00000448732 TBC1D2Q9BYX2 928 aa28.48■■■□□ 2.15
R3HDM2-208ENST00000448732 ZBED9Q6R2W3 1325 aa28.47■■■□□ 2.15
R3HDM2-208ENST00000448732 RRP1BQ14684 758 aaKnown RBP28.47■■■□□ 2.15
R3HDM2-208ENST00000448732 EAF2Q96CJ1 260 aaPredicted RBP28.47■■■□□ 2.15
R3HDM2-208ENST00000448732 SPP2Q13103 211 aa28.46■■■□□ 2.15
R3HDM2-208ENST00000448732 CEP85Q6P2H3 762 aa28.46■■■□□ 2.15
R3HDM2-208ENST00000448732 ADGRA1Q86SQ6 560 aa28.46■■■□□ 2.15
R3HDM2-208ENST00000448732 PROCA1Q8NCQ7 364 aaPredicted RBP28.46■■■□□ 2.15
R3HDM2-208ENST00000448732 ZNF280CQ8ND82 737 aa28.46■■■□□ 2.15
R3HDM2-208ENST00000448732 CCDC8Q9H0W5 538 aaPredicted RBP28.46■■■□□ 2.15
R3HDM2-208ENST00000448732 PIH1D3Q9NQM4 214 aaKnown RBP28.46■■■□□ 2.15
R3HDM2-208ENST00000448732 MGAMO43451 1857 aa28.46■■■□□ 2.15
R3HDM2-208ENST00000448732 PRKCZQ05513 592 aa28.45■■■□□ 2.14
R3HDM2-208ENST00000448732 MTFR1Q15390 333 aa28.45■■■□□ 2.14
R3HDM2-208ENST00000448732 SMCR8Q8TEV9 937 aaPredicted RBP28.45■■■□□ 2.14
R3HDM2-208ENST00000448732 TGFBRAP1Q8WUH2 860 aa28.45■■■□□ 2.14
R3HDM2-208ENST00000448732 GCC1Q96CN9 775 aa28.45■■■□□ 2.14
R3HDM2-208ENST00000448732 TLR7Q9NYK1 1049 aaKnown RBP28.45■■■□□ 2.14
R3HDM2-208ENST00000448732 MAST2Q6P0Q8 1798 aa28.45■■■□□ 2.14
R3HDM2-208ENST00000448732 USP17L5A8MUK1 530 aa28.44■■■□□ 2.14
R3HDM2-208ENST00000448732 TREML2Q5T2D2 321 aa28.44■■■□□ 2.14
R3HDM2-208ENST00000448732 METTL16Q86W50 562 aaKnown RBP28.44■■■□□ 2.14
R3HDM2-208ENST00000448732 GABRQQ9UN88 632 aa28.44■■■□□ 2.14
R3HDM2-208ENST00000448732 MYO5AQ9Y4I1 1855 aaKnown RBP28.44■■■□□ 2.14
R3HDM2-208ENST00000448732 FOXP4Q8IVH2 680 aaPredicted RBP28.43■■■□□ 2.14
R3HDM2-208ENST00000448732 PNMA3Q9UL41 463 aa28.43■■■□□ 2.14
R3HDM2-208ENST00000448732 ATAD5Q96QE3 1844 aa28.42■■■□□ 2.14
R3HDM2-208ENST00000448732 MAPKAPK5Q8IW41 473 aa28.42■■■□□ 2.14
R3HDM2-208ENST00000448732 PANK1Q8TE04 598 aa28.42■■■□□ 2.14
R3HDM2-208ENST00000448732 FLT1P17948 1338 aa28.42■■■□□ 2.14
R3HDM2-208ENST00000448732 SH3D19Q5HYK7 790 aa28.41■■■□□ 2.14
R3HDM2-208ENST00000448732 SLAIN1Q8ND83 568 aa28.41■■■□□ 2.14
R3HDM2-208ENST00000448732 AS3MTQ9HBK9 375 aa28.41■■■□□ 2.14
R3HDM2-208ENST00000448732 CDK5RAP2Q96SN8 1893 aa28.4■■■□□ 2.14
R3HDM2-208ENST00000448732 ERC1Q8IUD2 1116 aa28.4■■■□□ 2.14
R3HDM2-208ENST00000448732 ANKRD13CQ8N6S4 541 aa28.4■■■□□ 2.14
R3HDM2-208ENST00000448732 WDR18Q9BV38 432 aa28.4■■■□□ 2.14
R3HDM2-208ENST00000448732 SIPA1L1O43166 1804 aa28.4■■■□□ 2.14
R3HDM2-208ENST00000448732 FOCADQ5VW36 1801 aa28.4■■■□□ 2.14
R3HDM2-208ENST00000448732 CCL5P13501 91 aa28.39■■■□□ 2.14
R3HDM2-208ENST00000448732 CYP7A1P22680 504 aa28.39■■■□□ 2.14
R3HDM2-208ENST00000448732 HMGCS2P54868 508 aa28.39■■■□□ 2.14
R3HDM2-208ENST00000448732 UBXN2AP68543 259 aa28.39■■■□□ 2.14
R3HDM2-208ENST00000448732 PABPC4Q13310 644 aaKnown RBP eCLIP28.39■■■□□ 2.14
R3HDM2-208ENST00000448732 NKX2-3Q8TAU0 364 aa28.39■■■□□ 2.14
R3HDM2-208ENST00000448732 DNAJC18Q9H819 358 aa28.39■■■□□ 2.14
R3HDM2-208ENST00000448732 BIN2Q9UBW5 565 aaPredicted RBP28.39■■■□□ 2.14
R3HDM2-208ENST00000448732 PALD1Q9ULE6 856 aa28.39■■■□□ 2.14
R3HDM2-208ENST00000448732 EXOC6BQ9Y2D4 811 aa28.39■■■□□ 2.14
R3HDM2-208ENST00000448732 LOC285556D6RIA3 1793 aa28.38■■■□□ 2.13
R3HDM2-208ENST00000448732 TNPO2O14787 897 aaKnown RBP28.38■■■□□ 2.13
R3HDM2-208ENST00000448732 GJB1P08034 283 aa28.38■■■□□ 2.13
R3HDM2-208ENST00000448732 ASNSP08243 561 aa28.38■■■□□ 2.13
R3HDM2-208ENST00000448732 FLT3LGP49771 235 aa28.38■■■□□ 2.13
R3HDM2-208ENST00000448732 DYNLL1P63167 89 aaKnown RBP28.38■■■□□ 2.13
R3HDM2-208ENST00000448732 FAM110CQ1W6H9 321 aa28.38■■■□□ 2.13
R3HDM2-208ENST00000448732 SHISA4Q96DD7 197 aa28.38■■■□□ 2.13
R3HDM2-208ENST00000448732 GINM1Q9NU53 330 aa28.38■■■□□ 2.13
R3HDM2-208ENST00000448732 IDH1O75874 414 aaKnown RBP28.37■■■□□ 2.13
R3HDM2-208ENST00000448732 MS4A1P11836 297 aa28.37■■■□□ 2.13
R3HDM2-208ENST00000448732 GJA8P48165 433 aa28.37■■■□□ 2.13
R3HDM2-208ENST00000448732 GCLCP48506 637 aaPredicted RBP28.37■■■□□ 2.13
R3HDM2-208ENST00000448732 JAG1P78504 1218 aa28.37■■■□□ 2.13
R3HDM2-208ENST00000448732 IRF5Q13568 498 aa28.37■■■□□ 2.13
R3HDM2-208ENST00000448732 CERS3Q8IU89 383 aa28.37■■■□□ 2.13
R3HDM2-208ENST00000448732 PXYLP1Q8TE99 480 aa28.37■■■□□ 2.13
R3HDM2-208ENST00000448732 RNF208Q9H0X6 261 aa28.37■■■□□ 2.13
R3HDM2-208ENST00000448732 ADCY3O60266 1144 aa28.36■■■□□ 2.13
R3HDM2-208ENST00000448732 HSP90AB4PQ58FF6 505 aa28.36■■■□□ 2.13
R3HDM2-208ENST00000448732 TMED8Q6PL24 325 aaPredicted RBP28.36■■■□□ 2.13
R3HDM2-208ENST00000448732 CRACR2BQ8N4Y2 399 aaPredicted RBP28.36■■■□□ 2.13
R3HDM2-208ENST00000448732 BACE1P56817 501 aa28.35■■■□□ 2.13
R3HDM2-208ENST00000448732 AACSQ86V21 672 aa28.35■■■□□ 2.13
R3HDM2-208ENST00000448732 COA7Q96BR5 231 aa28.35■■■□□ 2.13
R3HDM2-208ENST00000448732 TRIM34Q9BYJ4 488 aa28.35■■■□□ 2.13
R3HDM2-208ENST00000448732 ASCC2Q9H1I8 757 aaPredicted RBP28.35■■■□□ 2.13
R3HDM2-208ENST00000448732 ANTXR1Q9H6X2 564 aa28.35■■■□□ 2.13
R3HDM2-208ENST00000448732 SAP30BPQ9UHR5 308 aaKnown RBP28.35■■■□□ 2.13
R3HDM2-208ENST00000448732 NDUFB9Q9Y6M9 179 aa28.35■■■□□ 2.13
R3HDM2-208ENST00000448732 HLA-DOAP06340 250 aa28.34■■■□□ 2.13
R3HDM2-208ENST00000448732 MAGEB6Q8N7X4 407 aa28.34■■■□□ 2.13
R3HDM2-208ENST00000448732 PCDH10Q9P2E7 1040 aa28.34■■■□□ 2.13
R3HDM2-208ENST00000448732 DOCK3Q8IZD9 2030 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms