RNA–Protein interactions for RNA: ENST00000447246.1

LRPPRC-205, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best)

Gene LRPPRC, Length 1,209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-205ENST00000447246 RLFQ13129 1914 aa18.34■□□□□ 0.53
LRPPRC-205ENST00000447246 CCDC85BQ15834 202 aaPredicted RBP18.34■□□□□ 0.53
LRPPRC-205ENST00000447246 SH3BP5LQ7L8J4 393 aa18.34■□□□□ 0.53
LRPPRC-205ENST00000447246 SH3RF1Q7Z6J0 888 aa18.34■□□□□ 0.53
LRPPRC-205ENST00000447246 LINS1Q8NG48 757 aa18.34■□□□□ 0.53
LRPPRC-205ENST00000447246 SOCS4Q8WXH5 440 aa18.34■□□□□ 0.53
LRPPRC-205ENST00000447246 DNAAF4Q8WXU2 420 aa18.34■□□□□ 0.53
LRPPRC-205ENST00000447246 SPINK5Q9NQ38 1064 aaPredicted RBP18.34■□□□□ 0.53
LRPPRC-205ENST00000447246 USP40Q9NVE5 1235 aa18.34■□□□□ 0.53
LRPPRC-205ENST00000447246 MYH13Q9UKX3 1938 aa18.33■□□□□ 0.53
LRPPRC-205ENST00000447246 MYO9BQ13459 2157 aa18.33■□□□□ 0.52
LRPPRC-205ENST00000447246 XRCC5P13010 732 aaKnown RBP18.33■□□□□ 0.52
LRPPRC-205ENST00000447246 EPHB4P54760 987 aa18.33■□□□□ 0.52
LRPPRC-205ENST00000447246 HMGCS2P54868 508 aa18.33■□□□□ 0.52
LRPPRC-205ENST00000447246 ZNF576Q9H609 170 aa18.33■□□□□ 0.52
LRPPRC-205ENST00000447246 RGS3P49796 1198 aa18.32■□□□□ 0.52
LRPPRC-205ENST00000447246 TRIM60Q495X7 471 aa18.32■□□□□ 0.52
LRPPRC-205ENST00000447246 CAVIN4Q5BKX8 364 aa18.32■□□□□ 0.52
LRPPRC-205ENST00000447246 ZSCAN29Q8IWY8 852 aaPredicted RBP18.32■□□□□ 0.52
LRPPRC-205ENST00000447246 PROCA1Q8NCQ7 364 aaPredicted RBP18.32■□□□□ 0.52
LRPPRC-205ENST00000447246 PDLIM7Q9NR12 457 aa18.32■□□□□ 0.52
LRPPRC-205ENST00000447246 MORF4L1Q9UBU8 362 aa18.32■□□□□ 0.52
LRPPRC-205ENST00000447246 CHD7Q9P2D1 2997 aa18.31■□□□□ 0.52
LRPPRC-205ENST00000447246 TRIM43BA6NCK2 446 aa18.31■□□□□ 0.52
LRPPRC-205ENST00000447246 CTNND1O60716 968 aaKnown RBP18.31■□□□□ 0.52
LRPPRC-205ENST00000447246 SLC4A2P04920 1241 aa18.31■□□□□ 0.52
LRPPRC-205ENST00000447246 FLIIQ13045 1269 aa18.31■□□□□ 0.52
LRPPRC-205ENST00000447246 SPP2Q13103 211 aa18.31■□□□□ 0.52
LRPPRC-205ENST00000447246 FKBP5Q13451 457 aaPredicted RBP18.31■□□□□ 0.52
LRPPRC-205ENST00000447246 TRIM43Q96BQ3 446 aaPredicted RBP18.31■□□□□ 0.52
LRPPRC-205ENST00000447246 GAS2L1Q99501 681 aaPredicted RBP18.31■□□□□ 0.52
LRPPRC-205ENST00000447246 EPHX3Q9H6B9 360 aa18.31■□□□□ 0.52
LRPPRC-205ENST00000447246 TXNRD2Q9NNW7 524 aa18.31■□□□□ 0.52
LRPPRC-205ENST00000447246 SUGT1Q9Y2Z0 365 aa18.31■□□□□ 0.52
LRPPRC-205ENST00000447246 ARIH1Q9Y4X5 557 aaPredicted RBP18.31■□□□□ 0.52
LRPPRC-205ENST00000447246 FAM196BA6NMK8 535 aa18.3■□□□□ 0.52
LRPPRC-205ENST00000447246 GJC2Q5T442 439 aaPredicted RBP18.3■□□□□ 0.52
LRPPRC-205ENST00000447246 TRMT44Q8IYL2 757 aaKnown RBP18.3■□□□□ 0.52
LRPPRC-205ENST00000447246 USP6NLQ92738 828 aa18.3■□□□□ 0.52
LRPPRC-205ENST00000447246 PRDM12Q9H4Q4 367 aa18.3■□□□□ 0.52
LRPPRC-205ENST00000447246 ATAD5Q96QE3 1844 aa18.29■□□□□ 0.52
LRPPRC-205ENST00000447246 DDTLA6NHG4 134 aaPredicted RBP18.29■□□□□ 0.52
LRPPRC-205ENST00000447246 DNM1LO00429 736 aa18.29■□□□□ 0.52
LRPPRC-205ENST00000447246 ITGB8P26012 769 aa18.29■□□□□ 0.52
LRPPRC-205ENST00000447246 CNGA1P29973 690 aa18.29■□□□□ 0.52
LRPPRC-205ENST00000447246 PRDX5P30044 214 aa18.29■□□□□ 0.52
LRPPRC-205ENST00000447246 RGS2P41220 211 aa18.29■□□□□ 0.52
LRPPRC-205ENST00000447246 TSR2Q969E8 191 aaKnown RBP18.29■□□□□ 0.52
LRPPRC-205ENST00000447246 TIFAQ96CG3 184 aa18.29■□□□□ 0.52
LRPPRC-205ENST00000447246 APBA2Q99767 749 aa18.29■□□□□ 0.52
LRPPRC-205ENST00000447246 PORCNQ9H237 461 aa18.29■□□□□ 0.52
LRPPRC-205ENST00000447246 FLRT1Q9NZU1 646 aa18.29■□□□□ 0.52
LRPPRC-205ENST00000447246 DDX20Q9UHI6 824 aaKnown RBP18.29■□□□□ 0.52
LRPPRC-205ENST00000447246 PABPC4Q13310 644 aaKnown RBP eCLIP18.28■□□□□ 0.52
LRPPRC-205ENST00000447246 SLC39A5Q6ZMH5 540 aa18.28■□□□□ 0.52
LRPPRC-205ENST00000447246 ZEB1P37275 1124 aaPredicted RBP18.27■□□□□ 0.52
LRPPRC-205ENST00000447246 IRX3P78415 501 aaPredicted RBP18.27■□□□□ 0.52
LRPPRC-205ENST00000447246 ADGRE1Q14246 886 aa18.27■□□□□ 0.52
LRPPRC-205ENST00000447246 LRRC24Q50LG9 513 aa18.27■□□□□ 0.52
LRPPRC-205ENST00000447246 METTL24Q5JXM2 366 aa18.27■□□□□ 0.52
LRPPRC-205ENST00000447246 MORN1Q5T089 497 aa18.27■□□□□ 0.52
LRPPRC-205ENST00000447246 GPR142Q7Z601 462 aa18.27■□□□□ 0.52
LRPPRC-205ENST00000447246 LPAR1Q92633 364 aa18.27■□□□□ 0.52
LRPPRC-205ENST00000447246 CHMP4AQ9BY43 222 aa18.27■□□□□ 0.52
LRPPRC-205ENST00000447246 NDUFB9Q9Y6M9 179 aa18.27■□□□□ 0.52
LRPPRC-205ENST00000447246 RFX7Q2KHR2 1363 aa18.27■□□□□ 0.51
LRPPRC-205ENST00000447246 MROH5Q6ZUA9 1318 aa18.26■□□□□ 0.51
LRPPRC-205ENST00000447246 F6X3S4 739 aa18.26■□□□□ 0.51
LRPPRC-205ENST00000447246 MYCNP04198 464 aaPredicted RBP18.26■□□□□ 0.51
LRPPRC-205ENST00000447246 MAP3K10Q02779 954 aa18.26■□□□□ 0.51
LRPPRC-205ENST00000447246 PICALMQ13492 652 aa18.26■□□□□ 0.51
LRPPRC-205ENST00000447246 WDR43Q15061 677 aaKnown RBP eCLIP18.26■□□□□ 0.51
LRPPRC-205ENST00000447246 AKNAD1Q5T1N1 836 aa18.26■□□□□ 0.51
LRPPRC-205ENST00000447246 ANO1Q5XXA6 986 aa18.26■□□□□ 0.51
LRPPRC-205ENST00000447246 ZNF280CQ8ND82 737 aa18.26■□□□□ 0.51
LRPPRC-205ENST00000447246 GPRC5AQ8NFJ5 357 aa18.26■□□□□ 0.51
LRPPRC-205ENST00000447246 P2RX7Q99572 595 aaKnown RBP18.26■□□□□ 0.51
LRPPRC-205ENST00000447246 ADAMTS8Q9UP79 889 aa18.26■□□□□ 0.51
LRPPRC-205ENST00000447246 CACNA1AO00555 2505 aa18.26■□□□□ 0.51
LRPPRC-205ENST00000447246 PLXNA1Q9UIW2 1896 aa18.25■□□□□ 0.51
LRPPRC-205ENST00000447246 FAM86C2PA6NEL3 165 aa18.25■□□□□ 0.51
LRPPRC-205ENST00000447246 IGFBP4P22692 258 aa18.25■□□□□ 0.51
LRPPRC-205ENST00000447246 PBX2P40425 430 aa18.25■□□□□ 0.51
LRPPRC-205ENST00000447246 TFF2Q03403 129 aa18.25■□□□□ 0.51
LRPPRC-205ENST00000447246 TMEM31Q5JXX7 168 aa18.25■□□□□ 0.51
LRPPRC-205ENST00000447246 CCAR1Q8IX12 1150 aaKnown RBP18.25■□□□□ 0.51
LRPPRC-205ENST00000447246 PAGR1Q9BTK6 254 aa18.25■□□□□ 0.51
LRPPRC-205ENST00000447246 DDX4Q9NQI0 724 aaKnown RBP18.25■□□□□ 0.51
LRPPRC-205ENST00000447246 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.24■□□□□ 0.51
LRPPRC-205ENST00000447246 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.24■□□□□ 0.51
LRPPRC-205ENST00000447246 ENTPD3O75355 529 aa18.24■□□□□ 0.51
LRPPRC-205ENST00000447246 MAPK4P31152 587 aa18.24■□□□□ 0.51
LRPPRC-205ENST00000447246 HERVK_113P62684 666 aa18.24■□□□□ 0.51
LRPPRC-205ENST00000447246 Q3C1V9 767 aa18.24■□□□□ 0.51
LRPPRC-205ENST00000447246 MFSD14CQ5VZR4 134 aa18.24■□□□□ 0.51
LRPPRC-205ENST00000447246 PLEKHH3Q7Z736 793 aa18.24■□□□□ 0.51
LRPPRC-205ENST00000447246 VGLL2Q8N8G2 317 aa18.24■□□□□ 0.51
LRPPRC-205ENST00000447246 TRPV1Q8NER1 839 aa18.24■□□□□ 0.51
LRPPRC-205ENST00000447246 FERMT2Q96AC1 680 aa18.24■□□□□ 0.51
LRPPRC-205ENST00000447246 GRXCR1A8MXD5 290 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms