RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 ARHGAP39Q9C0H5 1083 aa4.46□□□□□ -1.7
PMS1-215ENST00000447232 MYOZ2Q9NPC6 264 aa4.46□□□□□ -1.7
PMS1-215ENST00000447232 UNCXA6NJT0 531 aa4.46□□□□□ -1.7
PMS1-215ENST00000447232 SGPL1O95470 568 aa4.46□□□□□ -1.7
PMS1-215ENST00000447232 NTSR2O95665 410 aa4.46□□□□□ -1.7
PMS1-215ENST00000447232 CAPN2P17655 700 aa4.46□□□□□ -1.7
PMS1-215ENST00000447232 WASHC4Q2M389 1173 aa4.46□□□□□ -1.7
PMS1-215ENST00000447232 PPP1R26Q5T8A7 1209 aaPredicted RBP4.46□□□□□ -1.7
PMS1-215ENST00000447232 AGBL3Q8NEM8 1001 aa4.46□□□□□ -1.7
PMS1-215ENST00000447232 SLC10A4Q96EP9 437 aa4.46□□□□□ -1.7
PMS1-215ENST00000447232 KCTD15Q96SI1 283 aaPredicted RBP4.46□□□□□ -1.7
PMS1-215ENST00000447232 TSEN34Q9BSV6 310 aaKnown RBP4.46□□□□□ -1.7
PMS1-215ENST00000447232 C1QTNF1Q9BXJ1 281 aa4.46□□□□□ -1.7
PMS1-215ENST00000447232 RNF208Q9H0X6 261 aa4.46□□□□□ -1.7
PMS1-215ENST00000447232 HMX1Q9NP08 348 aaPredicted RBP4.46□□□□□ -1.7
PMS1-215ENST00000447232 ZMYND8Q9ULU4 1186 aaPredicted RBP4.46□□□□□ -1.7
PMS1-215ENST00000447232 HCN4Q9Y3Q4 1203 aa4.46□□□□□ -1.7
PMS1-215ENST00000447232 LACTBP83111 547 aaPredicted RBP4.45□□□□□ -1.7
PMS1-215ENST00000447232 SLC10A5Q5PT55 438 aa4.45□□□□□ -1.7
PMS1-215ENST00000447232 SUSD4Q5VX71 490 aa4.45□□□□□ -1.7
PMS1-215ENST00000447232 Q6ZVU0 165 aa4.45□□□□□ -1.7
PMS1-215ENST00000447232 ZBTB33Q86T24 672 aa4.45□□□□□ -1.7
PMS1-215ENST00000447232 CLMNQ96JQ2 1002 aa4.45□□□□□ -1.7
PMS1-215ENST00000447232 P2RX7Q99572 595 aaKnown RBP4.45□□□□□ -1.7
PMS1-215ENST00000447232 UBE2OQ9C0C9 1292 aaKnown RBP4.45□□□□□ -1.7
PMS1-215ENST00000447232 DNMT3LQ9UJW3 386 aa4.45□□□□□ -1.7
PMS1-215ENST00000447232 ANGEL1Q9UNK9 670 aaKnown RBP4.45□□□□□ -1.7
PMS1-215ENST00000447232 FAM205AQ6ZU69 1335 aa4.45□□□□□ -1.7
PMS1-215ENST00000447232 ERVV-1B6SEH8 477 aa4.45□□□□□ -1.7
PMS1-215ENST00000447232 GRK4P32298 578 aa4.45□□□□□ -1.7
PMS1-215ENST00000447232 CBLBQ13191 982 aa4.45□□□□□ -1.7
PMS1-215ENST00000447232 MTHFSDQ2M296 383 aaKnown RBP4.45□□□□□ -1.7
PMS1-215ENST00000447232 NBPF9Q3BBW0 867 aa4.45□□□□□ -1.7
PMS1-215ENST00000447232 C7orf61Q8IZ16 206 aa4.45□□□□□ -1.7
PMS1-215ENST00000447232 NLRP3Q96P20 1036 aa4.45□□□□□ -1.7
PMS1-215ENST00000447232 GPSM3Q9Y4H4 160 aa4.45□□□□□ -1.7
PMS1-215ENST00000447232 KCNQ3O43525 872 aa4.44□□□□□ -1.7
PMS1-215ENST00000447232 USP17L8P0C7I0 530 aa4.44□□□□□ -1.7
PMS1-215ENST00000447232 VSIG8P0DPA2 414 aa4.44□□□□□ -1.7
PMS1-215ENST00000447232 IL13P35225 146 aa4.44□□□□□ -1.7
PMS1-215ENST00000447232 RFC5P40937 340 aa4.44□□□□□ -1.7
PMS1-215ENST00000447232 PTK2Q05397 1052 aa4.44□□□□□ -1.7
PMS1-215ENST00000447232 PRKG1Q13976 671 aa4.44□□□□□ -1.7
PMS1-215ENST00000447232 ZNF34Q8IZ26 560 aa4.44□□□□□ -1.7
PMS1-215ENST00000447232 SEMA6BQ9H3T3 888 aa4.44□□□□□ -1.7
PMS1-215ENST00000447232 ZFYVE28Q9HCC9 887 aa4.44□□□□□ -1.7
PMS1-215ENST00000447232 POLLQ9UGP5 575 aa4.44□□□□□ -1.7
PMS1-215ENST00000447232 SRRDQ9UH36 339 aa4.44□□□□□ -1.7
PMS1-215ENST00000447232 CDV3Q9UKY7 258 aaKnown RBP4.44□□□□□ -1.7
PMS1-215ENST00000447232 FZD1Q9UP38 647 aa4.44□□□□□ -1.7
PMS1-215ENST00000447232 RIPOR2Q9Y4F9 1068 aa4.44□□□□□ -1.7
PMS1-215ENST00000447232 COL3A1P02461 1466 aaPredicted RBP4.44□□□□□ -1.7
PMS1-215ENST00000447232 SYN1P17600 705 aa4.44□□□□□ -1.7
PMS1-215ENST00000447232 CTGFP29279 349 aa4.44□□□□□ -1.7
PMS1-215ENST00000447232 GRAPQ13588 217 aa4.44□□□□□ -1.7
PMS1-215ENST00000447232 TMC4Q7Z404 712 aa4.44□□□□□ -1.7
PMS1-215ENST00000447232 USP38Q8NB14 1042 aa4.44□□□□□ -1.7
PMS1-215ENST00000447232 IL17REQ8NFR9 667 aa4.44□□□□□ -1.7
PMS1-215ENST00000447232 GRAPLQ8TC17 118 aaPredicted RBP4.44□□□□□ -1.7
PMS1-215ENST00000447232 ADAM32Q8TC27 787 aa4.44□□□□□ -1.7
PMS1-215ENST00000447232 MYLIPQ8WY64 445 aa4.44□□□□□ -1.7
PMS1-215ENST00000447232 PAWRQ96IZ0 340 aaKnown RBP4.44□□□□□ -1.7
PMS1-215ENST00000447232 LRFN3Q9BTN0 628 aa4.44□□□□□ -1.7
PMS1-215ENST00000447232 COL1A1P02452 1464 aaPredicted RBP4.43□□□□□ -1.7
PMS1-215ENST00000447232 WNT10BO00744 389 aa4.43□□□□□ -1.7
PMS1-215ENST00000447232 TLR2O60603 784 aa4.43□□□□□ -1.7
PMS1-215ENST00000447232 PPFIA3O75145 1194 aa4.43□□□□□ -1.7
PMS1-215ENST00000447232 TAF1CQ15572 869 aaPredicted RBP4.43□□□□□ -1.7
PMS1-215ENST00000447232 ZSCAN1Q8NBB4 408 aa4.43□□□□□ -1.7
PMS1-215ENST00000447232 ADAMTS19Q8TE59 1207 aa4.43□□□□□ -1.7
PMS1-215ENST00000447232 BRI3BPQ8WY22 251 aa4.43□□□□□ -1.7
PMS1-215ENST00000447232 GOPCQ9HD26 462 aa4.43□□□□□ -1.7
PMS1-215ENST00000447232 PGPEP1Q9NXJ5 209 aa4.43□□□□□ -1.7
PMS1-215ENST00000447232 MAP3K15Q6ZN16 1313 aa4.43□□□□□ -1.7
PMS1-215ENST00000447232 CEMIPQ8WUJ3 1361 aa4.43□□□□□ -1.7
PMS1-215ENST00000447232 COL4A1P02462 1669 aa4.43□□□□□ -1.7
PMS1-215ENST00000447232 OTOFQ9HC10 1997 aa4.43□□□□□ -1.7
PMS1-215ENST00000447232 FOSL2P15408 326 aa4.43□□□□□ -1.7
PMS1-215ENST00000447232 GPTP24298 496 aa4.43□□□□□ -1.7
PMS1-215ENST00000447232 MRE11P49959 708 aa4.43□□□□□ -1.7
PMS1-215ENST00000447232 UBXN2AP68543 259 aa4.43□□□□□ -1.7
PMS1-215ENST00000447232 TEFQ10587 303 aa4.43□□□□□ -1.7
PMS1-215ENST00000447232 KIF22Q14807 665 aa4.43□□□□□ -1.7
PMS1-215ENST00000447232 INTS6LQ5JSJ4 861 aaKnown RBP4.43□□□□□ -1.7
PMS1-215ENST00000447232 NECAB2Q7Z6G3 386 aa4.43□□□□□ -1.7
PMS1-215ENST00000447232 FAM43AQ8N2R8 423 aa4.43□□□□□ -1.7
PMS1-215ENST00000447232 DIS3LQ8TF46 1054 aaKnown RBP4.43□□□□□ -1.7
PMS1-215ENST00000447232 ATXN2LQ8WWM7 1075 aaKnown RBP4.43□□□□□ -1.7
PMS1-215ENST00000447232 TTYH1Q9H313 450 aaPredicted RBP4.43□□□□□ -1.7
PMS1-215ENST00000447232 PAK6Q9NQU5 681 aaPredicted RBP4.43□□□□□ -1.7
PMS1-215ENST00000447232 TTLL8A6PVC2 850 aa4.42□□□□□ -1.7
PMS1-215ENST00000447232 SPINT1O43278 529 aa4.42□□□□□ -1.7
PMS1-215ENST00000447232 SNRPA1P09661 255 aaKnown RBP4.42□□□□□ -1.7
PMS1-215ENST00000447232 DHX9Q08211 1270 aaKnown RBP4.42□□□□□ -1.7
PMS1-215ENST00000447232 SIN3AQ96ST3 1273 aa4.42□□□□□ -1.7
PMS1-215ENST00000447232 UHRF1Q96T88 793 aaPredicted RBP4.42□□□□□ -1.7
PMS1-215ENST00000447232 EYA3Q99504 573 aa4.42□□□□□ -1.7
PMS1-215ENST00000447232 NSFL1CQ9UNZ2 370 aaKnown RBP4.42□□□□□ -1.7
PMS1-215ENST00000447232 ADGRA2Q96PE1 1338 aa4.42□□□□□ -1.7
PMS1-215ENST00000447232 GPSM2P81274 684 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms