RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 IKBKGQ9Y6K9 419 aa20.04■□□□□ 0.8
ATG9A-215ENST00000446716 POTEB2H3BUK9 544 aa20.04■□□□□ 0.8
ATG9A-215ENST00000446716 ZSWIM4Q9H7M6 989 aa20.04■□□□□ 0.8
ATG9A-215ENST00000446716 EPB41P11171 864 aaKnown RBP20.04■□□□□ 0.8
ATG9A-215ENST00000446716 WDR44Q5JSH3 913 aa20.04■□□□□ 0.8
ATG9A-215ENST00000446716 OTUD7BQ6GQQ9 843 aa20.04■□□□□ 0.8
ATG9A-215ENST00000446716 SSX2IPQ9Y2D8 614 aa20.04■□□□□ 0.8
ATG9A-215ENST00000446716 SNX29Q8TEQ0 813 aa20.03■□□□□ 0.8
ATG9A-215ENST00000446716 SPC25Q9HBM1 224 aa20.03■□□□□ 0.8
ATG9A-215ENST00000446716 STK24Q9Y6E0 443 aa20.03■□□□□ 0.8
ATG9A-215ENST00000446716 TACC1O75410 805 aa20.03■□□□□ 0.8
ATG9A-215ENST00000446716 TSNARE1Q96NA8 513 aa20.03■□□□□ 0.8
ATG9A-215ENST00000446716 SELENOOQ9BVL4 669 aa20.03■□□□□ 0.8
ATG9A-215ENST00000446716 REXO1Q8N1G1 1221 aaKnown RBP20.03■□□□□ 0.8
ATG9A-215ENST00000446716 LMBR1Q8WVP7 490 aa20.03■□□□□ 0.8
ATG9A-215ENST00000446716 PDE8BO95263 885 aa20.03■□□□□ 0.8
ATG9A-215ENST00000446716 SKILP12757 684 aa20.03■□□□□ 0.8
ATG9A-215ENST00000446716 PABPC4Q13310 644 aaKnown RBP eCLIP20.03■□□□□ 0.88e-7■■■□□ 17.4
ATG9A-215ENST00000446716 RAPGEF1Q13905 1077 aa20.03■□□□□ 0.8
ATG9A-215ENST00000446716 TMC4Q7Z404 712 aa20.03■□□□□ 0.8
ATG9A-215ENST00000446716 PLCD3Q8N3E9 789 aa20.03■□□□□ 0.8
ATG9A-215ENST00000446716 EXOC7Q9UPT5 735 aa20.03■□□□□ 0.8
ATG9A-215ENST00000446716 LEMD3Q9Y2U8 911 aa20.03■□□□□ 0.8
ATG9A-215ENST00000446716 ANKARQ7Z5J8 1434 aa20.03■□□□□ 0.8
ATG9A-215ENST00000446716 CERKLQ49MI3 558 aaPredicted RBP20.02■□□□□ 0.8
ATG9A-215ENST00000446716 MYOM2P54296 1465 aa20.02■□□□□ 0.8
ATG9A-215ENST00000446716 KIF24Q5T7B8 1368 aa20.02■□□□□ 0.8
ATG9A-215ENST00000446716 PRR36Q9H6K5 1346 aa20.02■□□□□ 0.8
ATG9A-215ENST00000446716 E7EWF7 191 aa20.02■□□□□ 0.8
ATG9A-215ENST00000446716 SMC1AQ14683 1233 aaKnown RBP20.02■□□□□ 0.8
ATG9A-215ENST00000446716 PROSER3Q2NL68 480 aa20.02■□□□□ 0.8
ATG9A-215ENST00000446716 hCG_1642624A0A1W2PR95 340 aa20.02■□□□□ 0.8
ATG9A-215ENST00000446716 DNM2P50570 870 aa20.02■□□□□ 0.8
ATG9A-215ENST00000446716 KRT83P78385 493 aa20.02■□□□□ 0.8
ATG9A-215ENST00000446716 KIF5AQ12840 1032 aa20.02■□□□□ 0.8
ATG9A-215ENST00000446716 MAEAQ7L5Y9 396 aa20.02■□□□□ 0.8
ATG9A-215ENST00000446716 SDR42E1Q8WUS8 393 aa20.02■□□□□ 0.8
ATG9A-215ENST00000446716 ZMYM4Q5VZL5 1548 aa20.02■□□□□ 0.8
ATG9A-215ENST00000446716 ABCC4O15439 1325 aa20.02■□□□□ 0.8
ATG9A-215ENST00000446716 PLCB3Q01970 1234 aa20.02■□□□□ 0.79
ATG9A-215ENST00000446716 CCDC186Q7Z3E2 898 aa20.01■□□□□ 0.79
ATG9A-215ENST00000446716 IFNL3Q8IZI9 196 aa20.01■□□□□ 0.79
ATG9A-215ENST00000446716 ATP7BP35670 1465 aa20.01■□□□□ 0.79
ATG9A-215ENST00000446716 TMEM110-MUSTN1A8MSY1 372 aa20.01■□□□□ 0.79
ATG9A-215ENST00000446716 BBOX1O75936 387 aa20.01■□□□□ 0.79
ATG9A-215ENST00000446716 FAM160A1Q05DH4 1040 aa20.01■□□□□ 0.79
ATG9A-215ENST00000446716 KIF22Q14807 665 aa20.01■□□□□ 0.79
ATG9A-215ENST00000446716 CNNM4Q6P4Q7 775 aa20.01■□□□□ 0.79
ATG9A-215ENST00000446716 CCDC117Q8IWD4 279 aaPredicted RBP20.01■□□□□ 0.79
ATG9A-215ENST00000446716 NLRX1Q86UT6 975 aa20.01■□□□□ 0.79
ATG9A-215ENST00000446716 KCNH3Q9ULD8 1083 aa20.01■□□□□ 0.79
ATG9A-215ENST00000446716 THRAP3Q9Y2W1 955 aaKnown RBP20.01■□□□□ 0.79
ATG9A-215ENST00000446716 KRT40Q6A162 431 aa20.01■□□□□ 0.79
ATG9A-215ENST00000446716 GADL1Q6ZQY3 521 aa20.01■□□□□ 0.79
ATG9A-215ENST00000446716 ATF5Q9Y2D1 282 aaPredicted RBP20.01■□□□□ 0.79
ATG9A-215ENST00000446716 M0QZ92 97 aa20■□□□□ 0.79
ATG9A-215ENST00000446716 SLC8A3P57103 927 aa20■□□□□ 0.79
ATG9A-215ENST00000446716 CKAP4Q07065 602 aaKnown RBP20■□□□□ 0.79
ATG9A-215ENST00000446716 DNM3Q9UQ16 869 aa20■□□□□ 0.79
ATG9A-215ENST00000446716 ALAS1P13196 640 aa20■□□□□ 0.79
ATG9A-215ENST00000446716 ICA1Q05084 483 aa20■□□□□ 0.79
ATG9A-215ENST00000446716 CALCRLQ16602 461 aa20■□□□□ 0.79
ATG9A-215ENST00000446716 FMNL3Q8IVF7 1028 aa20■□□□□ 0.79
ATG9A-215ENST00000446716 ZNF654Q8IZM8 581 aa20■□□□□ 0.79
ATG9A-215ENST00000446716 GLG1Q92896 1179 aa20■□□□□ 0.79
ATG9A-215ENST00000446716 UIMC1Q96RL1 719 aa20■□□□□ 0.79
ATG9A-215ENST00000446716 LUC7L2Q9Y383 392 aaKnown RBP20■□□□□ 0.79
ATG9A-215ENST00000446716 SEC24BO95487 1268 aa20■□□□□ 0.79
ATG9A-215ENST00000446716 TRPC3Q13507 836 aa20■□□□□ 0.79
ATG9A-215ENST00000446716 ADGBQ8N7X0 1667 aa20■□□□□ 0.79
ATG9A-215ENST00000446716 GNPTABQ3T906 1256 aa19.99■□□□□ 0.79
ATG9A-215ENST00000446716 DDX12PQ92771 950 aa19.99■□□□□ 0.79
ATG9A-215ENST00000446716 KRT86O43790 486 aa19.99■□□□□ 0.79
ATG9A-215ENST00000446716 MAATS1Q7Z4T9 603 aa19.99■□□□□ 0.79
ATG9A-215ENST00000446716 PHKA1P46020 1223 aa19.99■□□□□ 0.79
ATG9A-215ENST00000446716 CDAN1Q8IWY9 1227 aa19.99■□□□□ 0.79
ATG9A-215ENST00000446716 KCNJ14Q9UNX9 436 aa19.99■□□□□ 0.79
ATG9A-215ENST00000446716 CCDC50Q8IVM0 306 aa19.99■□□□□ 0.79
ATG9A-215ENST00000446716 DHX37Q8IY37 1157 aaKnown RBP19.99■□□□□ 0.79
ATG9A-215ENST00000446716 BBXQ8WY36 941 aaPredicted RBP19.99■□□□□ 0.79
ATG9A-215ENST00000446716 VPS54Q9P1Q0 977 aa19.99■□□□□ 0.79
ATG9A-215ENST00000446716 KDM5AP29375 1690 aaKnown RBP19.98■□□□□ 0.79
ATG9A-215ENST00000446716 HECW2Q9P2P5 1572 aa19.98■□□□□ 0.79
ATG9A-215ENST00000446716 KRT5P13647 590 aa19.98■□□□□ 0.79
ATG9A-215ENST00000446716 ERFEQ4G0M1 354 aa19.98■□□□□ 0.79
ATG9A-215ENST00000446716 HERC4Q5GLZ8 1057 aaPredicted RBP19.98■□□□□ 0.79
ATG9A-215ENST00000446716 COPRSQ9NQ92 184 aa19.98■□□□□ 0.79
ATG9A-215ENST00000446716 KDM5CP41229 1560 aa19.98■□□□□ 0.79
ATG9A-215ENST00000446716 SMCO2A6NFE2 343 aa19.98■□□□□ 0.79
ATG9A-215ENST00000446716 STX10O60499 249 aa19.98■□□□□ 0.79
ATG9A-215ENST00000446716 CCDC175P0C221 793 aa19.98■□□□□ 0.79
ATG9A-215ENST00000446716 PIGBQ92521 554 aa19.98■□□□□ 0.79
ATG9A-215ENST00000446716 RNF216Q9NWF9 866 aaPredicted RBP19.98■□□□□ 0.79
ATG9A-215ENST00000446716 CETN3O15182 167 aa19.98■□□□□ 0.79
ATG9A-215ENST00000446716 PUS3Q9BZE2 481 aaKnown RBP19.98■□□□□ 0.79
ATG9A-215ENST00000446716 MYL5Q02045 173 aa19.98■□□□□ 0.79
ATG9A-215ENST00000446716 ZSCAN10Q96SZ4 725 aaPredicted RBP19.98■□□□□ 0.79
ATG9A-215ENST00000446716 ATP8A2Q9NTI2 1148 aa19.98■□□□□ 0.79
ATG9A-215ENST00000446716 SPATA31A3Q5VYP0 1347 aa19.97■□□□□ 0.79
ATG9A-215ENST00000446716 SHTN1A0MZ66 631 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms