RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 ERO1BQ86YB8 467 aa9.11□□□□□ -0.95
HDAC9-216ENST00000446646 HELBQ8NG08 1087 aaPredicted RBP9.11□□□□□ -0.95
HDAC9-216ENST00000446646 WRNIP1Q96S55 665 aa9.11□□□□□ -0.95
HDAC9-216ENST00000446646 SEMA6BQ9H3T3 888 aa9.11□□□□□ -0.95
HDAC9-216ENST00000446646 ZCCHC17Q9NP64 241 aaKnown RBP9.11□□□□□ -0.95
HDAC9-216ENST00000446646 LEMD3Q9Y2U8 911 aa9.11□□□□□ -0.95
HDAC9-216ENST00000446646 WDFY4Q6ZS81 3184 aa9.11□□□□□ -0.95
HDAC9-216ENST00000446646 TAF5LO75529 589 aa9.1□□□□□ -0.95
HDAC9-216ENST00000446646 INPP5BP32019 993 aa9.1□□□□□ -0.95
HDAC9-216ENST00000446646 FCGRTP55899 365 aa9.1□□□□□ -0.95
HDAC9-216ENST00000446646 MAP3K12Q12852 859 aa9.1□□□□□ -0.95
HDAC9-216ENST00000446646 ANKRD23Q86SG2 305 aa9.1□□□□□ -0.95
HDAC9-216ENST00000446646 CDC5LQ99459 802 aaKnown RBP9.1□□□□□ -0.95
HDAC9-216ENST00000446646 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.1□□□□□ -0.95
HDAC9-216ENST00000446646 TSR3Q9UJK0 312 aaKnown RBP9.1□□□□□ -0.95
HDAC9-216ENST00000446646 DOCK3Q8IZD9 2030 aa9.1□□□□□ -0.95
HDAC9-216ENST00000446646 WDHD1O75717 1129 aaPredicted RBP9.09□□□□□ -0.95
HDAC9-216ENST00000446646 LRRC26Q2I0M4 334 aa9.09□□□□□ -0.95
HDAC9-216ENST00000446646 MIGA2Q7L4E1 593 aa9.09□□□□□ -0.95
HDAC9-216ENST00000446646 RIC3Q7Z5B4 369 aa9.09□□□□□ -0.95
HDAC9-216ENST00000446646 DZIP1LQ8IYY4 767 aaKnown RBP9.09□□□□□ -0.95
HDAC9-216ENST00000446646 C11orf49Q9H6J7 331 aa9.09□□□□□ -0.95
HDAC9-216ENST00000446646 CWC25Q9NXE8 425 aaPredicted RBP9.09□□□□□ -0.95
HDAC9-216ENST00000446646 ECM29Q5VYK3 1845 aa9.09□□□□□ -0.95
HDAC9-216ENST00000446646 CHL1O00533 1208 aa9.08□□□□□ -0.96
HDAC9-216ENST00000446646 RNF40O75150 1001 aa9.08□□□□□ -0.96
HDAC9-216ENST00000446646 IGKV5-2P06315 115 aa9.08□□□□□ -0.96
HDAC9-216ENST00000446646 IL1R1P14778 569 aa9.08□□□□□ -0.96
HDAC9-216ENST00000446646 RIPK4P57078 832 aa9.08□□□□□ -0.96
HDAC9-216ENST00000446646 CHRNDQ07001 517 aa9.08□□□□□ -0.96
HDAC9-216ENST00000446646 PTGDRQ13258 359 aa9.08□□□□□ -0.96
HDAC9-216ENST00000446646 ZNF697Q5TEC3 545 aa9.08□□□□□ -0.96
HDAC9-216ENST00000446646 NYAP1Q6ZVC0 841 aa9.08□□□□□ -0.96
HDAC9-216ENST00000446646 TTC13Q8NBP0 860 aa9.08□□□□□ -0.96
HDAC9-216ENST00000446646 CCDC191Q8NCU4 936 aa9.08□□□□□ -0.96
HDAC9-216ENST00000446646 DBF4Q9UBU7 674 aaPredicted RBP9.08□□□□□ -0.96
HDAC9-216ENST00000446646 NEUROD2Q15784 382 aa9.07□□□□□ -0.96
HDAC9-216ENST00000446646 TJAP1Q5JTD0 557 aa9.07□□□□□ -0.96
HDAC9-216ENST00000446646 C9orf50Q5SZB4 431 aa9.07□□□□□ -0.96
HDAC9-216ENST00000446646 PXYLP1Q8TE99 480 aa9.07□□□□□ -0.96
HDAC9-216ENST00000446646 HYPKQ9NX55 129 aa9.07□□□□□ -0.96
HDAC9-216ENST00000446646 TTF2Q9UNY4 1162 aaKnown RBP9.07□□□□□ -0.96
HDAC9-216ENST00000446646 KCNH4Q9UQ05 1017 aa9.07□□□□□ -0.96
HDAC9-216ENST00000446646 LAS1LQ9Y4W2 734 aaKnown RBP9.07□□□□□ -0.96
HDAC9-216ENST00000446646 DDX60LQ5H9U9 1706 aaKnown RBP9.07□□□□□ -0.96
HDAC9-216ENST00000446646 ARAP2Q8WZ64 1704 aa9.06□□□□□ -0.96
HDAC9-216ENST00000446646 TNPO2O14787 897 aaKnown RBP9.06□□□□□ -0.96
HDAC9-216ENST00000446646 SLURP2P0DP57 97 aa9.06□□□□□ -0.96
HDAC9-216ENST00000446646 COL6A1P12109 1028 aa9.06□□□□□ -0.96
HDAC9-216ENST00000446646 FOSL2P15408 326 aa9.06□□□□□ -0.96
HDAC9-216ENST00000446646 ITGA6P23229 1130 aa9.06□□□□□ -0.96
HDAC9-216ENST00000446646 CRKP46108 304 aa9.06□□□□□ -0.96
HDAC9-216ENST00000446646 KCNJ4P48050 445 aa9.06□□□□□ -0.96
HDAC9-216ENST00000446646 PPP4CP60510 307 aa9.06□□□□□ -0.96
HDAC9-216ENST00000446646 PPATQ06203 517 aa9.06□□□□□ -0.96
HDAC9-216ENST00000446646 IRF5Q13568 498 aa9.06□□□□□ -0.96
HDAC9-216ENST00000446646 TNFAIP1Q13829 316 aa9.06□□□□□ -0.96
HDAC9-216ENST00000446646 DUSP27Q5VZP5 1158 aa9.06□□□□□ -0.96
HDAC9-216ENST00000446646 BABAM1Q9NWV8 329 aa9.06□□□□□ -0.96
HDAC9-216ENST00000446646 MGAMO43451 1857 aa9.06□□□□□ -0.96
HDAC9-216ENST00000446646 FAM205AQ6ZU69 1335 aa9.05□□□□□ -0.96
HDAC9-216ENST00000446646 GPR37O15354 613 aa9.05□□□□□ -0.96
HDAC9-216ENST00000446646 IGHMBP2P38935 993 aaKnown RBP9.05□□□□□ -0.96
HDAC9-216ENST00000446646 FKBP1AP62942 108 aaKnown RBP9.05□□□□□ -0.96
HDAC9-216ENST00000446646 SHHQ15465 462 aa9.05□□□□□ -0.96
HDAC9-216ENST00000446646 CWF19L2Q2TBE0 894 aaKnown RBP9.05□□□□□ -0.96
HDAC9-216ENST00000446646 MFSD14BQ5SR56 506 aa9.05□□□□□ -0.96
HDAC9-216ENST00000446646 KRI1Q8N9T8 703 aaKnown RBP9.05□□□□□ -0.96
HDAC9-216ENST00000446646 ANKLE1Q8NAG6 615 aa9.05□□□□□ -0.96
HDAC9-216ENST00000446646 SYMPKQ92797 1274 aaKnown RBP9.05□□□□□ -0.96
HDAC9-216ENST00000446646 NECAB3Q96P71 396 aaPredicted RBP9.05□□□□□ -0.96
HDAC9-216ENST00000446646 PARK7Q99497 189 aaKnown RBP9.05□□□□□ -0.96
HDAC9-216ENST00000446646 METTL22Q9BUU2 404 aaPredicted RBP9.05□□□□□ -0.96
HDAC9-216ENST00000446646 ANKRD2Q9GZV1 360 aa9.05□□□□□ -0.96
HDAC9-216ENST00000446646 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.05□□□□□ -0.96
HDAC9-216ENST00000446646 OGDHLQ9ULD0 1010 aa9.05□□□□□ -0.96
HDAC9-216ENST00000446646 USP34Q70CQ2 3546 aa9.05□□□□□ -0.96
HDAC9-216ENST00000446646 MAPK8IP3Q9UPT6 1336 aa9.05□□□□□ -0.96
HDAC9-216ENST00000446646 HSP90B1P14625 803 aaKnown RBP9.04□□□□□ -0.96
HDAC9-216ENST00000446646 TMPOP42166 694 aaKnown RBP9.04□□□□□ -0.96
HDAC9-216ENST00000446646 TMEM132AQ24JP5 1023 aa9.04□□□□□ -0.96
HDAC9-216ENST00000446646 C15orf52Q6ZUT6 534 aaKnown RBP9.04□□□□□ -0.96
HDAC9-216ENST00000446646 SERPINA10Q9UK55 444 aa9.04□□□□□ -0.96
HDAC9-216ENST00000446646 CFAP54Q96N23 3096 aa9.03□□□□□ -0.96
HDAC9-216ENST00000446646 ELL2O00472 640 aaPredicted RBP9.03□□□□□ -0.96
HDAC9-216ENST00000446646 PEX10O60683 326 aa9.03□□□□□ -0.96
HDAC9-216ENST00000446646 NEFMP07197 916 aa9.03□□□□□ -0.96
HDAC9-216ENST00000446646 GRIN2CQ14957 1233 aa9.03□□□□□ -0.96
HDAC9-216ENST00000446646 UBE3BQ7Z3V4 1068 aa9.03□□□□□ -0.96
HDAC9-216ENST00000446646 CCDC84Q86UT8 332 aaPredicted RBP9.03□□□□□ -0.96
HDAC9-216ENST00000446646 ANKRD13CQ8N6S4 541 aa9.03□□□□□ -0.96
HDAC9-216ENST00000446646 TRIB2Q92519 343 aa9.03□□□□□ -0.96
HDAC9-216ENST00000446646 GJD2Q9UKL4 321 aa9.03□□□□□ -0.96
HDAC9-216ENST00000446646 MAP3K2Q9Y2U5 619 aa9.03□□□□□ -0.96
HDAC9-216ENST00000446646 MYO9BQ13459 2157 aa9.02□□□□□ -0.97
HDAC9-216ENST00000446646 HMGCRP04035 888 aa9.02□□□□□ -0.97
HDAC9-216ENST00000446646 GYG1P46976 350 aa9.02□□□□□ -0.97
HDAC9-216ENST00000446646 CASP7P55210 303 aa9.02□□□□□ -0.97
HDAC9-216ENST00000446646 SWT1Q5T5J6 900 aaKnown RBP9.02□□□□□ -0.97
HDAC9-216ENST00000446646 APOBEC3HQ6NTF7 200 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms