RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 LAMB1P07942 1786 aa28.92■■■□□ 2.22
C9orf3-207ENST00000445181 FLT1P17948 1338 aa28.92■■■□□ 2.22
C9orf3-207ENST00000445181 STAP2Q9UGK3 403 aa28.91■■■□□ 2.22
C9orf3-207ENST00000445181 ATRNL1Q5VV63 1379 aa28.9■■■□□ 2.22
C9orf3-207ENST00000445181 CCL15-CCL14A0A0B4J2E2 113 aa28.9■■■□□ 2.22
C9orf3-207ENST00000445181 INPP5BP32019 993 aa28.9■■■□□ 2.22
C9orf3-207ENST00000445181 UBE3CQ15386 1083 aa28.9■■■□□ 2.22
C9orf3-207ENST00000445181 CCL15Q16663 113 aa28.9■■■□□ 2.22
C9orf3-207ENST00000445181 SLFNL1Q499Z3 407 aa28.9■■■□□ 2.22
C9orf3-207ENST00000445181 BRI3BPQ8WY22 251 aa28.9■■■□□ 2.22
C9orf3-207ENST00000445181 RIOK1Q9BRS2 568 aaKnown RBP28.9■■■□□ 2.22
C9orf3-207ENST00000445181 MYH7P12883 1935 aa28.9■■■□□ 2.22
C9orf3-207ENST00000445181 CRHR2Q13324 411 aa28.89■■■□□ 2.22
C9orf3-207ENST00000445181 PKN2Q16513 984 aaKnown RBP28.89■■■□□ 2.22
C9orf3-207ENST00000445181 LRRFIP1Q32MZ4 808 aaKnown RBP28.89■■■□□ 2.22
C9orf3-207ENST00000445181 CRNKL1Q9BZJ0 848 aaKnown RBP28.89■■■□□ 2.22
C9orf3-207ENST00000445181 DHX36Q9H2U1 1008 aaKnown RBP28.89■■■□□ 2.22
C9orf3-207ENST00000445181 ZNF112Q9UJU3 913 aa28.89■■■□□ 2.22
C9orf3-207ENST00000445181 COL2A1P02458 1487 aaPredicted RBP28.89■■■□□ 2.22
C9orf3-207ENST00000445181 FSD1Q9BTV5 496 aa28.88■■■□□ 2.21
C9orf3-207ENST00000445181 SAP30BPQ9UHR5 308 aaKnown RBP28.88■■■□□ 2.21
C9orf3-207ENST00000445181 CDK5RAP2Q96SN8 1893 aa28.88■■■□□ 2.21
C9orf3-207ENST00000445181 MBD4O95243 580 aa28.87■■■□□ 2.21
C9orf3-207ENST00000445181 CHGBP05060 677 aa28.87■■■□□ 2.21
C9orf3-207ENST00000445181 LCORLQ8N3X6 602 aa28.87■■■□□ 2.21
C9orf3-207ENST00000445181 ARMT1Q9H993 441 aa28.87■■■□□ 2.21
C9orf3-207ENST00000445181 FOCADQ5VW36 1801 aa28.87■■■□□ 2.21
C9orf3-207ENST00000445181 PPIL2Q13356 520 aa28.86■■■□□ 2.21
C9orf3-207ENST00000445181 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.86■■■□□ 2.211e-7■■■□□ 18.8
C9orf3-207ENST00000445181 PI4KBQ9UBF8 816 aa28.86■■■□□ 2.21
C9orf3-207ENST00000445181 PALD1Q9ULE6 856 aa28.86■■■□□ 2.21
C9orf3-207ENST00000445181 IRF6O14896 467 aa28.85■■■□□ 2.21
C9orf3-207ENST00000445181 RNF113AO15541 343 aaKnown RBP28.85■■■□□ 2.21
C9orf3-207ENST00000445181 HLA-DOAP06340 250 aa28.85■■■□□ 2.21
C9orf3-207ENST00000445181 NEFLP07196 543 aa28.85■■■□□ 2.21
C9orf3-207ENST00000445181 ZFYP08048 801 aaPredicted RBP28.85■■■□□ 2.21
C9orf3-207ENST00000445181 CETPP11597 493 aa28.85■■■□□ 2.21
C9orf3-207ENST00000445181 PPATQ06203 517 aa28.85■■■□□ 2.21
C9orf3-207ENST00000445181 SNAPC2Q13487 334 aa28.85■■■□□ 2.21
C9orf3-207ENST00000445181 TRIM34Q9BYJ4 488 aa28.85■■■□□ 2.21
C9orf3-207ENST00000445181 SLURP2P0DP57 97 aa28.84■■■□□ 2.21
C9orf3-207ENST00000445181 SLC4A8Q2Y0W8 1093 aa28.84■■■□□ 2.21
C9orf3-207ENST00000445181 FAM196BA6NMK8 535 aa28.83■■■□□ 2.21
C9orf3-207ENST00000445181 TBC1D12O60347 775 aa28.83■■■□□ 2.21
C9orf3-207ENST00000445181 PLEKHM2Q8IWE5 1019 aa28.83■■■□□ 2.21
C9orf3-207ENST00000445181 FAM43AQ8N2R8 423 aa28.83■■■□□ 2.21
C9orf3-207ENST00000445181 CRACR2BQ8N4Y2 399 aaPredicted RBP28.83■■■□□ 2.21
C9orf3-207ENST00000445181 PUS7LQ9H0K6 701 aaKnown RBP28.83■■■□□ 2.21
C9orf3-207ENST00000445181 HPS5Q9UPZ3 1129 aa28.83■■■□□ 2.21
C9orf3-207ENST00000445181 MAP3K10Q02779 954 aa28.82■■■□□ 2.2
C9orf3-207ENST00000445181 TAF1CQ15572 869 aaPredicted RBP28.82■■■□□ 2.2
C9orf3-207ENST00000445181 NOL9Q5SY16 702 aaKnown RBP28.82■■■□□ 2.2
C9orf3-207ENST00000445181 SDR42E1Q8WUS8 393 aa28.82■■■□□ 2.2
C9orf3-207ENST00000445181 EVI5LQ96CN4 794 aa28.82■■■□□ 2.2
C9orf3-207ENST00000445181 HERC5Q9UII4 1024 aaKnown RBP28.82■■■□□ 2.2
C9orf3-207ENST00000445181 PHF20L1A8MW92 1017 aa28.81■■■□□ 2.2
C9orf3-207ENST00000445181 TRIM6-TRIM34B2RNG4 842 aa28.81■■■□□ 2.2
C9orf3-207ENST00000445181 FBXO46Q6PJ61 603 aaPredicted RBP28.81■■■□□ 2.2
C9orf3-207ENST00000445181 APPBP2Q92624 585 aa28.81■■■□□ 2.2
C9orf3-207ENST00000445181 ZFYVE28Q9HCC9 887 aa28.81■■■□□ 2.2
C9orf3-207ENST00000445181 MYH1P12882 1939 aa28.81■■■□□ 2.2
C9orf3-207ENST00000445181 RGS19P49795 217 aa28.8■■■□□ 2.2
C9orf3-207ENST00000445181 ERO1AQ96HE7 468 aa28.8■■■□□ 2.2
C9orf3-207ENST00000445181 PICK1Q9NRD5 415 aa28.8■■■□□ 2.2
C9orf3-207ENST00000445181 BTBD19C9JJ37 291 aa28.79■■■□□ 2.2
C9orf3-207ENST00000445181 POLR3DP05423 398 aaPredicted RBP28.79■■■□□ 2.2
C9orf3-207ENST00000445181 SP3Q02447 781 aa28.79■■■□□ 2.2
C9orf3-207ENST00000445181 TTC6Q86TZ1 520 aa28.79■■■□□ 2.2
C9orf3-207ENST00000445181 FOXP4Q8IVH2 680 aaPredicted RBP28.79■■■□□ 2.2
C9orf3-207ENST00000445181 DDRGK1Q96HY6 314 aa28.79■■■□□ 2.2
C9orf3-207ENST00000445181 OSBPL3Q9H4L5 887 aa28.79■■■□□ 2.2
C9orf3-207ENST00000445181 MCM9Q9NXL9 1143 aa28.79■■■□□ 2.2
C9orf3-207ENST00000445181 TRIM17Q9Y577 477 aa28.79■■■□□ 2.2
C9orf3-207ENST00000445181 SLC4A4Q9Y6R1 1079 aa28.79■■■□□ 2.2
C9orf3-207ENST00000445181 PRKAB2O43741 272 aa28.78■■■□□ 2.2
C9orf3-207ENST00000445181 CTNND1O60716 968 aaKnown RBP28.78■■■□□ 2.2
C9orf3-207ENST00000445181 SCYL3Q8IZE3 742 aa28.78■■■□□ 2.2
C9orf3-207ENST00000445181 CD99L2Q8TCZ2 262 aa28.78■■■□□ 2.2
C9orf3-207ENST00000445181 OSBP2Q969R2 916 aa28.78■■■□□ 2.2
C9orf3-207ENST00000445181 RILPL2Q969X0 211 aa28.78■■■□□ 2.2
C9orf3-207ENST00000445181 DCP1AQ9NPI6 582 aaPredicted RBP28.78■■■□□ 2.2
C9orf3-207ENST00000445181 NAV1Q8NEY1 1877 aa28.78■■■□□ 2.2
C9orf3-207ENST00000445181 OTOP1Q7RTM1 612 aa28.77■■■□□ 2.2
C9orf3-207ENST00000445181 ZCCHC17Q9NP64 241 aaKnown RBP28.77■■■□□ 2.2
C9orf3-207ENST00000445181 ATP8A2Q9NTI2 1148 aa28.77■■■□□ 2.2
C9orf3-207ENST00000445181 KCNH4Q9UQ05 1017 aa28.77■■■□□ 2.2
C9orf3-207ENST00000445181 PDE4AP27815 886 aa28.75■■■□□ 2.19
C9orf3-207ENST00000445181 SOX10P56693 466 aa28.75■■■□□ 2.19
C9orf3-207ENST00000445181 MLLT1Q03111 559 aaPredicted RBP28.75■■■□□ 2.19
C9orf3-207ENST00000445181 AMOTL1Q8IY63 956 aa28.75■■■□□ 2.19
C9orf3-207ENST00000445181 STRBPQ96SI9 672 aaKnown RBP28.75■■■□□ 2.19
C9orf3-207ENST00000445181 SERPINB13Q9UIV8 391 aa28.75■■■□□ 2.19
C9orf3-207ENST00000445181 SIPA1L1O43166 1804 aa28.74■■■□□ 2.19
C9orf3-207ENST00000445181 M0R2C6 588 aa28.74■■■□□ 2.19
C9orf3-207ENST00000445181 GPAA1O43292 621 aa28.74■■■□□ 2.19
C9orf3-207ENST00000445181 ZHX2Q9Y6X8 837 aa28.74■■■□□ 2.19
C9orf3-207ENST00000445181 CXCL11O14625 94 aa28.73■■■□□ 2.19
C9orf3-207ENST00000445181 PLCD1P51178 756 aa28.73■■■□□ 2.19
C9orf3-207ENST00000445181 METTL16Q86W50 562 aaKnown RBP28.73■■■□□ 2.19
C9orf3-207ENST00000445181 EHD4Q9H223 541 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms