RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 DOCK1Q14185 1865 aa22.55■■□□□ 1.2
CCDC188-202ENST00000444532 MYH1P12882 1939 aa22.55■■□□□ 1.2
CCDC188-202ENST00000444532 MYH7P12883 1935 aa22.55■■□□□ 1.2
CCDC188-202ENST00000444532 CXCL11O14625 94 aa22.54■■□□□ 1.2
CCDC188-202ENST00000444532 PTPRAP18433 802 aa22.54■■□□□ 1.2
CCDC188-202ENST00000444532 ADD2P35612 726 aa22.54■■□□□ 1.2
CCDC188-202ENST00000444532 ZSCAN25Q6NSZ9 544 aa22.54■■□□□ 1.2
CCDC188-202ENST00000444532 ZNF296Q8WUU4 475 aaPredicted RBP22.54■■□□□ 1.2
CCDC188-202ENST00000444532 R3HDMLQ9H3Y0 253 aa22.54■■□□□ 1.2
CCDC188-202ENST00000444532 ZCCHC17Q9NP64 241 aaKnown RBP22.54■■□□□ 1.2
CCDC188-202ENST00000444532 PALD1Q9ULE6 856 aa22.54■■□□□ 1.2
CCDC188-202ENST00000444532 TTC41PQ6P2S7 1318 aa22.54■■□□□ 1.2
CCDC188-202ENST00000444532 SIPA1L1O43166 1804 aa22.53■■□□□ 1.2
CCDC188-202ENST00000444532 FAM196BA6NMK8 535 aa22.53■■□□□ 1.2
CCDC188-202ENST00000444532 HLA-DOAP06340 250 aa22.53■■□□□ 1.2
CCDC188-202ENST00000444532 EXOC6Q8TAG9 804 aa22.53■■□□□ 1.2
CCDC188-202ENST00000444532 CRNKL1Q9BZJ0 848 aaKnown RBP22.53■■□□□ 1.2
CCDC188-202ENST00000444532 ZHX2Q9Y6X8 837 aa22.53■■□□□ 1.2
CCDC188-202ENST00000444532 FKTNO75072 461 aa22.52■■□□□ 1.2
CCDC188-202ENST00000444532 CRHR2Q13324 411 aa22.52■■□□□ 1.2
CCDC188-202ENST00000444532 UBE3CQ15386 1083 aa22.52■■□□□ 1.2
CCDC188-202ENST00000444532 ANKRD45Q5TZF3 282 aa22.52■■□□□ 1.2
CCDC188-202ENST00000444532 CRACR2BQ8N4Y2 399 aaPredicted RBP22.52■■□□□ 1.2
CCDC188-202ENST00000444532 RWDD1Q9H446 243 aaPredicted RBP22.52■■□□□ 1.2
CCDC188-202ENST00000444532 SAP30BPQ9UHR5 308 aaKnown RBP22.52■■□□□ 1.2
CCDC188-202ENST00000444532 AFG3L2Q9Y4W6 797 aa22.52■■□□□ 1.2
CCDC188-202ENST00000444532 ERC2O15083 957 aa22.51■■□□□ 1.19
CCDC188-202ENST00000444532 CAP2P40123 477 aa22.51■■□□□ 1.19
CCDC188-202ENST00000444532 DGKZQ13574 1117 aa22.51■■□□□ 1.19
CCDC188-202ENST00000444532 FAM43AQ8N2R8 423 aa22.51■■□□□ 1.19
CCDC188-202ENST00000444532 TRIM34Q9BYJ4 488 aa22.51■■□□□ 1.19
CCDC188-202ENST00000444532 PHIPQ8WWQ0 1821 aa22.5■■□□□ 1.19
CCDC188-202ENST00000444532 ATAD5Q96QE3 1844 aa22.5■■□□□ 1.19
CCDC188-202ENST00000444532 BTBD19C9JJ37 291 aa22.5■■□□□ 1.19
CCDC188-202ENST00000444532 TAF1CQ15572 869 aaPredicted RBP22.5■■□□□ 1.19
CCDC188-202ENST00000444532 CTU1Q7Z7A3 348 aaKnown RBP22.5■■□□□ 1.19
CCDC188-202ENST00000444532 TTC6Q86TZ1 520 aa22.5■■□□□ 1.19
CCDC188-202ENST00000444532 TBC1D2Q9BYX2 928 aa22.5■■□□□ 1.19
CCDC188-202ENST00000444532 MCOLN1Q9GZU1 580 aa22.5■■□□□ 1.19
CCDC188-202ENST00000444532 ZFYVE28Q9HCC9 887 aa22.5■■□□□ 1.19
CCDC188-202ENST00000444532 GLRX3O76003 335 aaKnown RBP22.49■■□□□ 1.19
CCDC188-202ENST00000444532 TSHZ3Q63HK5 1081 aa22.49■■□□□ 1.19
CCDC188-202ENST00000444532 ANKRD23Q86SG2 305 aa22.49■■□□□ 1.19
CCDC188-202ENST00000444532 KBTBD3Q8NAB2 608 aa22.49■■□□□ 1.19
CCDC188-202ENST00000444532 EHD4Q9H223 541 aa22.49■■□□□ 1.19
CCDC188-202ENST00000444532 MX1P20591 662 aa22.48■■□□□ 1.19
CCDC188-202ENST00000444532 FASTKD5Q7L8L6 764 aaKnown RBP22.48■■□□□ 1.19
CCDC188-202ENST00000444532 LCORLQ8N3X6 602 aa22.48■■□□□ 1.19
CCDC188-202ENST00000444532 ABHD8Q96I13 439 aa22.48■■□□□ 1.19
CCDC188-202ENST00000444532 DNAJC18Q9H819 358 aa22.48■■□□□ 1.19
CCDC188-202ENST00000444532 GINM1Q9NU53 330 aa22.48■■□□□ 1.19
CCDC188-202ENST00000444532 A0A0G2JLL6 359 aaPredicted RBP22.47■■□□□ 1.19
CCDC188-202ENST00000444532 MOGSQ13724 837 aa22.47■■□□□ 1.19
CCDC188-202ENST00000444532 RRP1BQ14684 758 aaKnown RBP22.47■■□□□ 1.19
CCDC188-202ENST00000444532 SLFNL1Q499Z3 407 aa22.47■■□□□ 1.19
CCDC188-202ENST00000444532 PRRT2Q7Z6L0 340 aaPredicted RBP22.47■■□□□ 1.19
CCDC188-202ENST00000444532 PI4K2BQ8TCG2 481 aa22.47■■□□□ 1.19
CCDC188-202ENST00000444532 OTUD7AQ8TE49 926 aaPredicted RBP22.47■■□□□ 1.19
CCDC188-202ENST00000444532 ARMT1Q9H993 441 aa22.47■■□□□ 1.19
CCDC188-202ENST00000444532 SERPINB13Q9UIV8 391 aa22.47■■□□□ 1.19
CCDC188-202ENST00000444532 NAV1Q8NEY1 1877 aa22.47■■□□□ 1.19
CCDC188-202ENST00000444532 DDX60LQ5H9U9 1706 aaKnown RBP22.46■■□□□ 1.19
CCDC188-202ENST00000444532 MBD4O95243 580 aa22.46■■□□□ 1.19
CCDC188-202ENST00000444532 ASNSP08243 561 aa22.46■■□□□ 1.19
CCDC188-202ENST00000444532 PKN2Q16513 984 aaKnown RBP22.46■■□□□ 1.19
CCDC188-202ENST00000444532 LRRFIP1Q32MZ4 808 aaKnown RBP22.46■■□□□ 1.19
CCDC188-202ENST00000444532 SMC5Q8IY18 1101 aa22.46■■□□□ 1.19
CCDC188-202ENST00000444532 DCP1AQ9NPI6 582 aaPredicted RBP22.46■■□□□ 1.19
CCDC188-202ENST00000444532 ATP8A2Q9NTI2 1148 aa22.46■■□□□ 1.19
CCDC188-202ENST00000444532 PTPRFP10586 1907 aa22.46■■□□□ 1.19
CCDC188-202ENST00000444532 SALL3Q9BXA9 1300 aa22.46■■□□□ 1.19
CCDC188-202ENST00000444532 USP17L5A8MUK1 530 aa22.45■■□□□ 1.18
CCDC188-202ENST00000444532 PDHXO00330 501 aa22.45■■□□□ 1.18
CCDC188-202ENST00000444532 POLR3DP05423 398 aaPredicted RBP22.45■■□□□ 1.18
CCDC188-202ENST00000444532 ZFYP08048 801 aaPredicted RBP22.45■■□□□ 1.18
CCDC188-202ENST00000444532 SLC4A8Q2Y0W8 1093 aa22.45■■□□□ 1.18
CCDC188-202ENST00000444532 SDR42E1Q8WUS8 393 aa22.45■■□□□ 1.18
CCDC188-202ENST00000444532 MCM9Q9NXL9 1143 aa22.45■■□□□ 1.18
CCDC188-202ENST00000444532 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.45■■□□□ 1.18
CCDC188-202ENST00000444532 STAP2Q9UGK3 403 aa22.45■■□□□ 1.18
CCDC188-202ENST00000444532 TRIM75PA6NK02 468 aa22.44■■□□□ 1.18
CCDC188-202ENST00000444532 TLR2O60603 784 aa22.44■■□□□ 1.18
CCDC188-202ENST00000444532 IGHDP01880 384 aa22.44■■□□□ 1.18
CCDC188-202ENST00000444532 CHGBP05060 677 aa22.44■■□□□ 1.18
CCDC188-202ENST00000444532 PLCD1P51178 756 aa22.44■■□□□ 1.18
CCDC188-202ENST00000444532 SP3Q02447 781 aa22.44■■□□□ 1.18
CCDC188-202ENST00000444532 GPAT2Q6NUI2 795 aa22.44■■□□□ 1.18
CCDC188-202ENST00000444532 TATDN1Q6P1N9 297 aa22.44■■□□□ 1.18
CCDC188-202ENST00000444532 ZNF280CQ8ND82 737 aa22.44■■□□□ 1.18
CCDC188-202ENST00000444532 ERO1AQ96HE7 468 aa22.44■■□□□ 1.18
CCDC188-202ENST00000444532 PUS7LQ9H0K6 701 aaKnown RBP22.44■■□□□ 1.18
CCDC188-202ENST00000444532 AS3MTQ9HBK9 375 aa22.44■■□□□ 1.18
CCDC188-202ENST00000444532 RNF113AO15541 343 aaKnown RBP22.43■■□□□ 1.18
CCDC188-202ENST00000444532 CCDC84Q86UT8 332 aaPredicted RBP22.43■■□□□ 1.18
CCDC188-202ENST00000444532 WDR18Q9BV38 432 aa22.43■■□□□ 1.18
CCDC188-202ENST00000444532 TAOK2Q9UL54 1235 aa22.43■■□□□ 1.18
CCDC188-202ENST00000444532 CAPN15O75808 1086 aa22.42■■□□□ 1.18
CCDC188-202ENST00000444532 SPP2Q13103 211 aa22.42■■□□□ 1.18
CCDC188-202ENST00000444532 GADL1Q6ZQY3 521 aa22.42■■□□□ 1.18
CCDC188-202ENST00000444532 APPBP2Q92624 585 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms