RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 UBR1Q8IWV7 1749 aa12.08□□□□□ -0.48
TOP3B-210ENST00000444502 ERVV-1B6SEH8 477 aa12.08□□□□□ -0.48
TOP3B-210ENST00000444502 RFX5P48382 616 aaPredicted RBP12.08□□□□□ -0.48
TOP3B-210ENST00000444502 ARHGAP27Q6ZUM4 889 aa12.08□□□□□ -0.48
TOP3B-210ENST00000444502 LOC102724159A0A0B4J2E5 919 aa12.07□□□□□ -0.48
TOP3B-210ENST00000444502 PWP2Q15269 919 aaKnown RBP12.07□□□□□ -0.48
TOP3B-210ENST00000444502 KCNJ14Q9UNX9 436 aa12.07□□□□□ -0.48
TOP3B-210ENST00000444502 USP42Q9H9J4 1324 aaKnown RBP12.07□□□□□ -0.48
TOP3B-210ENST00000444502 A0A0G2JLW4 131 aa12.07□□□□□ -0.48
TOP3B-210ENST00000444502 AFMP43652 599 aa12.07□□□□□ -0.48
TOP3B-210ENST00000444502 PTPN14Q15678 1187 aa12.07□□□□□ -0.48
TOP3B-210ENST00000444502 ANO1Q5XXA6 986 aa12.07□□□□□ -0.48
TOP3B-210ENST00000444502 KRT40Q6A162 431 aa12.07□□□□□ -0.48
TOP3B-210ENST00000444502 ZNF274Q96GC6 653 aaPredicted RBP12.07□□□□□ -0.48
TOP3B-210ENST00000444502 UIMC1Q96RL1 719 aa12.07□□□□□ -0.48
TOP3B-210ENST00000444502 MAGEC2Q9UBF1 373 aaPredicted RBP12.07□□□□□ -0.48
TOP3B-210ENST00000444502 SAMM50Q9Y512 469 aa12.07□□□□□ -0.48
TOP3B-210ENST00000444502 STOX1Q6ZVD7 989 aa12.07□□□□□ -0.48
TOP3B-210ENST00000444502 INCENPQ9NQS7 918 aa12.07□□□□□ -0.48
TOP3B-210ENST00000444502 UBA7P41226 1012 aa12.06□□□□□ -0.48
TOP3B-210ENST00000444502 MCAMP43121 646 aa12.06□□□□□ -0.48
TOP3B-210ENST00000444502 VPS72Q15906 364 aa12.06□□□□□ -0.48
TOP3B-210ENST00000444502 CPLX3Q8WVH0 158 aa12.06□□□□□ -0.48
TOP3B-210ENST00000444502 CELF1Q92879 486 aaKnown RBP12.06□□□□□ -0.48
TOP3B-210ENST00000444502 USP40Q9NVE5 1235 aa12.06□□□□□ -0.48
TOP3B-210ENST00000444502 PSDA5PKW4 1024 aaPredicted RBP12.06□□□□□ -0.48
TOP3B-210ENST00000444502 TNNI2P48788 182 aa12.06□□□□□ -0.48
TOP3B-210ENST00000444502 RGS22Q8NE09 1264 aa12.06□□□□□ -0.48
TOP3B-210ENST00000444502 AIFM3Q96NN9 605 aa12.06□□□□□ -0.48
TOP3B-210ENST00000444502 RASSF4Q9H2L5 321 aa12.06□□□□□ -0.48
TOP3B-210ENST00000444502 DEF6Q9H4E7 631 aa12.06□□□□□ -0.48
TOP3B-210ENST00000444502 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.06□□□□□ -0.48
TOP3B-210ENST00000444502 PXDNLA1KZ92 1463 aa12.06□□□□□ -0.48
TOP3B-210ENST00000444502 PRKAB2O43741 272 aa12.06□□□□□ -0.48
TOP3B-210ENST00000444502 RAD17O75943 681 aa12.06□□□□□ -0.48
TOP3B-210ENST00000444502 SKILP12757 684 aa12.06□□□□□ -0.48
TOP3B-210ENST00000444502 NAA30Q147X3 362 aaPredicted RBP12.06□□□□□ -0.48
TOP3B-210ENST00000444502 DLGAP5Q15398 846 aa12.06□□□□□ -0.48
TOP3B-210ENST00000444502 BRAPQ7Z569 592 aa12.06□□□□□ -0.48
TOP3B-210ENST00000444502 IFNL3Q8IZI9 196 aa12.06□□□□□ -0.48
TOP3B-210ENST00000444502 DRC1Q96MC2 740 aa12.06□□□□□ -0.48
TOP3B-210ENST00000444502 PIH1D3Q9NQM4 214 aaKnown RBP12.06□□□□□ -0.48
TOP3B-210ENST00000444502 COL15A1P39059 1388 aa12.05□□□□□ -0.48
TOP3B-210ENST00000444502 TFAP4Q01664 338 aa12.05□□□□□ -0.48
TOP3B-210ENST00000444502 STIM1Q13586 685 aa12.05□□□□□ -0.48
TOP3B-210ENST00000444502 DIXDC1Q155Q3 683 aa12.05□□□□□ -0.48
TOP3B-210ENST00000444502 FILIP1LQ4L180 1135 aa12.05□□□□□ -0.48
TOP3B-210ENST00000444502 ISCA1Q9BUE6 129 aa12.05□□□□□ -0.48
TOP3B-210ENST00000444502 NARFQ9UHQ1 456 aa12.05□□□□□ -0.48
TOP3B-210ENST00000444502 MEGF6O75095 1541 aa12.05□□□□□ -0.48
TOP3B-210ENST00000444502 PPEF1O14829 653 aaPredicted RBP12.05□□□□□ -0.48
TOP3B-210ENST00000444502 CAVIN2O95810 425 aa12.05□□□□□ -0.48
TOP3B-210ENST00000444502 MYSM1Q5VVJ2 828 aa12.05□□□□□ -0.48
TOP3B-210ENST00000444502 CNKSR1Q969H4 720 aa12.05□□□□□ -0.48
TOP3B-210ENST00000444502 CBFA2T2O43439 604 aa12.05□□□□□ -0.48
TOP3B-210ENST00000444502 BANK1Q8NDB2 785 aa12.05□□□□□ -0.48
TOP3B-210ENST00000444502 CCDC12Q8WUD4 166 aaPredicted RBP12.05□□□□□ -0.48
TOP3B-210ENST00000444502 TMEM87BQ96K49 555 aa12.05□□□□□ -0.48
TOP3B-210ENST00000444502 RPAP1Q9BWH6 1393 aaPredicted RBP12.05□□□□□ -0.48
TOP3B-210ENST00000444502 TOP1P11387 765 aaKnown RBP12.04□□□□□ -0.48
TOP3B-210ENST00000444502 DIS3L2Q8IYB7 885 aaKnown RBP12.04□□□□□ -0.48
TOP3B-210ENST00000444502 CWC15Q9P013 229 aaKnown RBP12.04□□□□□ -0.48
TOP3B-210ENST00000444502 IFNKQ9P0W0 207 aa12.04□□□□□ -0.48
TOP3B-210ENST00000444502 CLIC4Q9Y696 253 aa12.04□□□□□ -0.48
TOP3B-210ENST00000444502 V9GY48 417 aaPredicted RBP12.04□□□□□ -0.48
TOP3B-210ENST00000444502 NRXN3Q9Y4C0 1643 aa12.04□□□□□ -0.48
TOP3B-210ENST00000444502 MST1RQ04912 1400 aa12.04□□□□□ -0.48
TOP3B-210ENST00000444502 CLRN2A0PK11 232 aa12.04□□□□□ -0.48
TOP3B-210ENST00000444502 C21orf2O43822 256 aa12.04□□□□□ -0.48
TOP3B-210ENST00000444502 ITPK1Q13572 414 aa12.04□□□□□ -0.48
TOP3B-210ENST00000444502 UBE4AQ14139 1066 aa12.04□□□□□ -0.48
TOP3B-210ENST00000444502 NOM1Q5C9Z4 860 aaKnown RBP12.04□□□□□ -0.48
TOP3B-210ENST00000444502 DACH1Q9UI36 760 aa12.04□□□□□ -0.48
TOP3B-210ENST00000444502 PCDHA7Q9UN72 937 aa12.04□□□□□ -0.48
TOP3B-210ENST00000444502 UTYO14607 1347 aa12.04□□□□□ -0.48
TOP3B-210ENST00000444502 TCP10L2B9ZVM9 353 aa12.04□□□□□ -0.48
TOP3B-210ENST00000444502 ZNF202O95125 648 aa12.04□□□□□ -0.48
TOP3B-210ENST00000444502 ATP2B4P23634 1241 aa12.04□□□□□ -0.48
TOP3B-210ENST00000444502 DYNLL1P63167 89 aaKnown RBP12.04□□□□□ -0.48
TOP3B-210ENST00000444502 FAM193AP78312 1265 aa12.04□□□□□ -0.48
TOP3B-210ENST00000444502 AKNAD1Q5T1N1 836 aa12.04□□□□□ -0.48
TOP3B-210ENST00000444502 PPFIBP1Q86W92 1011 aa12.04□□□□□ -0.48
TOP3B-210ENST00000444502 TEKT1Q969V4 418 aa12.04□□□□□ -0.48
TOP3B-210ENST00000444502 ADD2P35612 726 aa12.04□□□□□ -0.48
TOP3B-210ENST00000444502 LRMPQ12912 555 aa12.04□□□□□ -0.48
TOP3B-210ENST00000444502 EAPPQ56P03 285 aaPredicted RBP12.04□□□□□ -0.48
TOP3B-210ENST00000444502 SMARCE1Q969G3 411 aa12.04□□□□□ -0.48
TOP3B-210ENST00000444502 DHX58Q96C10 678 aa12.04□□□□□ -0.48
TOP3B-210ENST00000444502 TCP11L1Q9NUJ3 509 aa12.04□□□□□ -0.48
TOP3B-210ENST00000444502 FBXO3Q9UK99 471 aa12.04□□□□□ -0.48
TOP3B-210ENST00000444502 C3P01024 1663 aa12.03□□□□□ -0.48
TOP3B-210ENST00000444502 XDHP47989 1333 aa12.03□□□□□ -0.48
TOP3B-210ENST00000444502 ZNF609O15014 1411 aa12.03□□□□□ -0.48
TOP3B-210ENST00000444502 KDM6AO15550 1401 aaPredicted RBP12.03□□□□□ -0.48
TOP3B-210ENST00000444502 UBASH3AP57075 661 aa12.03□□□□□ -0.48
TOP3B-210ENST00000444502 SP4Q02446 784 aa12.03□□□□□ -0.48
TOP3B-210ENST00000444502 RESTQ13127 1097 aa12.03□□□□□ -0.48
TOP3B-210ENST00000444502 NFIXQ14938 502 aa12.03□□□□□ -0.48
TOP3B-210ENST00000444502 TMEM266Q2M3C6 531 aa12.03□□□□□ -0.48
TOP3B-210ENST00000444502 FBXO18Q8NFZ0 1043 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms