RNA–Protein interactions for RNA: ENST00000443790.1

EDEM1-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-203ENST00000443790 TTC39AQ5SRH9 613 aa24.4■■□□□ 1.5
EDEM1-203ENST00000443790 SLAIN1Q8ND83 568 aa24.4■■□□□ 1.5
EDEM1-203ENST00000443790 DBNDD2Q9BQY9 259 aa24.4■■□□□ 1.5
EDEM1-203ENST00000443790 SNRKQ9NRH2 765 aa24.4■■□□□ 1.5
EDEM1-203ENST00000443790 GABRQQ9UN88 632 aa24.4■■□□□ 1.5
EDEM1-203ENST00000443790 LOC285556D6RIA3 1793 aa24.39■■□□□ 1.5
EDEM1-203ENST00000443790 CCL5P13501 91 aa24.39■■□□□ 1.49
EDEM1-203ENST00000443790 ATP8B2P98198 1209 aa24.39■■□□□ 1.49
EDEM1-203ENST00000443790 CCDC158Q5M9N0 1113 aa24.39■■□□□ 1.49
EDEM1-203ENST00000443790 TREML2Q5T2D2 321 aa24.39■■□□□ 1.49
EDEM1-203ENST00000443790 PROCA1Q8NCQ7 364 aaPredicted RBP24.39■■□□□ 1.49
EDEM1-203ENST00000443790 NKX2-3Q8TAU0 364 aa24.39■■□□□ 1.49
EDEM1-203ENST00000443790 SH3RF3Q8TEJ3 882 aaPredicted RBP24.39■■□□□ 1.49
EDEM1-203ENST00000443790 NOL10Q9BSC4 688 aaKnown RBP24.39■■□□□ 1.49
EDEM1-203ENST00000443790 CAP2P40123 477 aa24.38■■□□□ 1.49
EDEM1-203ENST00000443790 UBXN2AP68543 259 aa24.38■■□□□ 1.49
EDEM1-203ENST00000443790 NAA16Q6N069 864 aaPredicted RBP24.38■■□□□ 1.49
EDEM1-203ENST00000443790 ZNF280CQ8ND82 737 aa24.38■■□□□ 1.49
EDEM1-203ENST00000443790 TBC1D2Q9BYX2 928 aa24.38■■□□□ 1.49
EDEM1-203ENST00000443790 C1orf115Q9H7X2 142 aa24.38■■□□□ 1.49
EDEM1-203ENST00000443790 AATFQ9NY61 560 aaKnown RBP eCLIP24.38■■□□□ 1.49
EDEM1-203ENST00000443790 BIN2Q9UBW5 565 aaPredicted RBP24.38■■□□□ 1.49
EDEM1-203ENST00000443790 HERC5Q9UII4 1024 aaKnown RBP24.38■■□□□ 1.49
EDEM1-203ENST00000443790 PNMA3Q9UL41 463 aa24.38■■□□□ 1.49
EDEM1-203ENST00000443790 SIPA1L1O43166 1804 aa24.38■■□□□ 1.49
EDEM1-203ENST00000443790 TNPO2O14787 897 aaKnown RBP24.37■■□□□ 1.49
EDEM1-203ENST00000443790 GJB1P08034 283 aa24.37■■□□□ 1.49
EDEM1-203ENST00000443790 GJA8P48165 433 aa24.37■■□□□ 1.49
EDEM1-203ENST00000443790 SPP2Q13103 211 aa24.37■■□□□ 1.49
EDEM1-203ENST00000443790 RRP1BQ14684 758 aaKnown RBP24.37■■□□□ 1.49
EDEM1-203ENST00000443790 FTSJ3Q8IY81 847 aaKnown RBP24.37■■□□□ 1.49
EDEM1-203ENST00000443790 RNF208Q9H0X6 261 aa24.37■■□□□ 1.49
EDEM1-203ENST00000443790 SURF6O75683 361 aaKnown RBP24.36■■□□□ 1.49
EDEM1-203ENST00000443790 BAG3O95817 575 aa24.36■■□□□ 1.49
EDEM1-203ENST00000443790 CYP2E1P05181 493 aaPredicted RBP24.36■■□□□ 1.49
EDEM1-203ENST00000443790 FLT3LGP49771 235 aa24.36■■□□□ 1.49
EDEM1-203ENST00000443790 ANKRD13CQ8N6S4 541 aa24.36■■□□□ 1.49
EDEM1-203ENST00000443790 ZNF512BQ96KM6 892 aaPredicted RBP24.36■■□□□ 1.49
EDEM1-203ENST00000443790 DHX36Q9H2U1 1008 aaKnown RBP24.36■■□□□ 1.49
EDEM1-203ENST00000443790 PI4KBQ9UBF8 816 aa24.36■■□□□ 1.49
EDEM1-203ENST00000443790 ADCY3O60266 1144 aa24.35■■□□□ 1.49
EDEM1-203ENST00000443790 PLCG2P16885 1265 aa24.35■■□□□ 1.49
EDEM1-203ENST00000443790 PPP4CP60510 307 aa24.35■■□□□ 1.49
EDEM1-203ENST00000443790 FAM110CQ1W6H9 321 aa24.35■■□□□ 1.49
EDEM1-203ENST00000443790 ADGRA1Q86SQ6 560 aa24.35■■□□□ 1.49
EDEM1-203ENST00000443790 CDK5RAP2Q96SN8 1893 aa24.34■■□□□ 1.49
EDEM1-203ENST00000443790 FOCADQ5VW36 1801 aa24.34■■□□□ 1.49
EDEM1-203ENST00000443790 USP17L5A8MUK1 530 aa24.34■■□□□ 1.49
EDEM1-203ENST00000443790 HMGCS2P54868 508 aa24.34■■□□□ 1.49
EDEM1-203ENST00000443790 IRF5Q13568 498 aa24.34■■□□□ 1.49
EDEM1-203ENST00000443790 ITPRIPQ8IWB1 547 aa24.34■■□□□ 1.49
EDEM1-203ENST00000443790 NOP58Q9Y2X3 529 aaKnown RBP24.34■■□□□ 1.49
EDEM1-203ENST00000443790 FLT1P17948 1338 aa24.34■■□□□ 1.49
EDEM1-203ENST00000443790 IGSF3O75054 1194 aa24.33■■□□□ 1.49
EDEM1-203ENST00000443790 RLBP1P12271 317 aa24.33■■□□□ 1.49
EDEM1-203ENST00000443790 ELNP15502 786 aa24.33■■□□□ 1.49
EDEM1-203ENST00000443790 ZAP70P43403 619 aa24.33■■□□□ 1.49
EDEM1-203ENST00000443790 UBE2Q1Q7Z7E8 422 aa24.33■■□□□ 1.49
EDEM1-203ENST00000443790 PXYLP1Q8TE99 480 aa24.33■■□□□ 1.49
EDEM1-203ENST00000443790 TGFBRAP1Q8WUH2 860 aa24.33■■□□□ 1.49
EDEM1-203ENST00000443790 UNC93B1Q9H1C4 597 aa24.33■■□□□ 1.49
EDEM1-203ENST00000443790 AS3MTQ9HBK9 375 aa24.33■■□□□ 1.49
EDEM1-203ENST00000443790 DBNLQ9UJU6 430 aaKnown RBP24.33■■□□□ 1.49
EDEM1-203ENST00000443790 MYO5AQ9Y4I1 1855 aaKnown RBP24.32■■□□□ 1.48
EDEM1-203ENST00000443790 H0YGN5 161 aa24.32■■□□□ 1.48
EDEM1-203ENST00000443790 ZBTB7BO15156 539 aaPredicted RBP24.32■■□□□ 1.48
EDEM1-203ENST00000443790 PABPC4Q13310 644 aaKnown RBP eCLIP24.32■■□□□ 1.48
EDEM1-203ENST00000443790 SH3D19Q5HYK7 790 aa24.32■■□□□ 1.48
EDEM1-203ENST00000443790 MAPKAPK5Q8IW41 473 aa24.32■■□□□ 1.48
EDEM1-203ENST00000443790 U2AF1L4Q8WU68 220 aaKnown RBP24.32■■□□□ 1.48
EDEM1-203ENST00000443790 PIH1D3Q9NQM4 214 aaKnown RBP24.32■■□□□ 1.48
EDEM1-203ENST00000443790 TLR7Q9NYK1 1049 aaKnown RBP24.32■■□□□ 1.48
EDEM1-203ENST00000443790 COLQQ9Y215 455 aaPredicted RBP24.32■■□□□ 1.48
EDEM1-203ENST00000443790 INHAP05111 366 aa24.31■■□□□ 1.48
EDEM1-203ENST00000443790 GCLCP48506 637 aaPredicted RBP24.31■■□□□ 1.48
EDEM1-203ENST00000443790 COA7Q96BR5 231 aa24.31■■□□□ 1.48
EDEM1-203ENST00000443790 DNAJC18Q9H819 358 aa24.31■■□□□ 1.48
EDEM1-203ENST00000443790 ASNSP08243 561 aa24.3■■□□□ 1.48
EDEM1-203ENST00000443790 METTL16Q86W50 562 aaKnown RBP24.3■■□□□ 1.48
EDEM1-203ENST00000443790 WDR18Q9BV38 432 aa24.3■■□□□ 1.48
EDEM1-203ENST00000443790 ASCC2Q9H1I8 757 aaPredicted RBP24.3■■□□□ 1.48
EDEM1-203ENST00000443790 EAF2Q96CJ1 260 aaPredicted RBP24.29■■□□□ 1.48
EDEM1-203ENST00000443790 CCDC8Q9H0W5 538 aaPredicted RBP24.29■■□□□ 1.48
EDEM1-203ENST00000443790 PALD1Q9ULE6 856 aa24.29■■□□□ 1.48
EDEM1-203ENST00000443790 SGPL1O95470 568 aa24.28■■□□□ 1.48
EDEM1-203ENST00000443790 FXR1P51114 621 aaKnown RBP eCLIP24.28■■□□□ 1.48
EDEM1-203ENST00000443790 JAG1P78504 1218 aa24.28■■□□□ 1.48
EDEM1-203ENST00000443790 MTMR2Q13614 643 aa24.28■■□□□ 1.48
EDEM1-203ENST00000443790 FOXP4Q8IVH2 680 aaPredicted RBP24.28■■□□□ 1.48
EDEM1-203ENST00000443790 CRACR2BQ8N4Y2 399 aaPredicted RBP24.28■■□□□ 1.48
EDEM1-203ENST00000443790 DPF3Q92784 378 aa24.28■■□□□ 1.48
EDEM1-203ENST00000443790 HTATIP2Q9BUP3 242 aa24.28■■□□□ 1.48
EDEM1-203ENST00000443790 TAOK2Q9UL54 1235 aa24.28■■□□□ 1.48
EDEM1-203ENST00000443790 CEP290O15078 2479 aa24.27■■□□□ 1.48
EDEM1-203ENST00000443790 FARP2O94887 1054 aaPredicted RBP24.27■■□□□ 1.48
EDEM1-203ENST00000443790 BACE1P56817 501 aa24.27■■□□□ 1.48
EDEM1-203ENST00000443790 CEP85Q6P2H3 762 aa24.27■■□□□ 1.48
EDEM1-203ENST00000443790 TRIM34Q9BYJ4 488 aa24.27■■□□□ 1.48
EDEM1-203ENST00000443790 DOCK3Q8IZD9 2030 aa24.27■■□□□ 1.48
EDEM1-203ENST00000443790 IDH1O75874 414 aaKnown RBP24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms