RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 ZNF213O14771 459 aa16.14■□□□□ 0.17
TM9SF4-204ENST00000442842 SEC24BO95487 1268 aa16.14■□□□□ 0.17
TM9SF4-204ENST00000442842 ALX1Q15699 326 aa16.14■□□□□ 0.17
TM9SF4-204ENST00000442842 SBK1Q52WX2 424 aa16.14■□□□□ 0.17
TM9SF4-204ENST00000442842 MAP4K1Q92918 833 aa16.14■□□□□ 0.17
TM9SF4-204ENST00000442842 HOOK2Q96ED9 719 aa16.14■□□□□ 0.17
TM9SF4-204ENST00000442842 SERPINB13Q9UIV8 391 aa16.14■□□□□ 0.17
TM9SF4-204ENST00000442842 CELF2O95319 508 aaKnown RBP16.13■□□□□ 0.17
TM9SF4-204ENST00000442842 DCAF15Q66K64 600 aa16.13■□□□□ 0.17
TM9SF4-204ENST00000442842 SLC44A5Q8NCS7 719 aa16.13■□□□□ 0.17
TM9SF4-204ENST00000442842 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.13■□□□□ 0.17
TM9SF4-204ENST00000442842 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.13■□□□□ 0.17
TM9SF4-204ENST00000442842 ROBO3Q96MS0 1386 aa16.13■□□□□ 0.17
TM9SF4-204ENST00000442842 BAZ2AQ9UIF9 1905 aaKnown RBP16.12■□□□□ 0.17
TM9SF4-204ENST00000442842 EIF5BO60841 1220 aaKnown RBP16.12■□□□□ 0.17
TM9SF4-204ENST00000442842 ITGBL1O95965 494 aaPredicted RBP16.12■□□□□ 0.17
TM9SF4-204ENST00000442842 SLC3A2P08195 630 aaKnown RBP16.12■□□□□ 0.17
TM9SF4-204ENST00000442842 TBC1D10CQ8IV04 446 aa16.12■□□□□ 0.17
TM9SF4-204ENST00000442842 ZNF341Q9BYN7 854 aa16.12■□□□□ 0.17
TM9SF4-204ENST00000442842 EHD4Q9H223 541 aa16.12■□□□□ 0.17
TM9SF4-204ENST00000442842 DNAJC18Q9H819 358 aa16.12■□□□□ 0.17
TM9SF4-204ENST00000442842 TOMM22Q9NS69 142 aa16.12■□□□□ 0.17
TM9SF4-204ENST00000442842 SIPA1L1O43166 1804 aa16.12■□□□□ 0.17
TM9SF4-204ENST00000442842 MYH1P12882 1939 aa16.11■□□□□ 0.17
TM9SF4-204ENST00000442842 PRDM1O75626 825 aa16.11■□□□□ 0.17
TM9SF4-204ENST00000442842 MCCP23508 829 aa16.11■□□□□ 0.17
TM9SF4-204ENST00000442842 FSTL1Q12841 308 aa16.11■□□□□ 0.17
TM9SF4-204ENST00000442842 RRP12Q5JTH9 1297 aaKnown RBP16.11■□□□□ 0.17
TM9SF4-204ENST00000442842 CREB3L3Q68CJ9 461 aa16.11■□□□□ 0.17
TM9SF4-204ENST00000442842 C16orf86Q6ZW13 317 aa16.11■□□□□ 0.17
TM9SF4-204ENST00000442842 MOB2Q70IA6 237 aa16.11■□□□□ 0.17
TM9SF4-204ENST00000442842 WRNIP1Q96S55 665 aa16.11■□□□□ 0.17
TM9SF4-204ENST00000442842 HERC5Q9UII4 1024 aaKnown RBP16.11■□□□□ 0.17
TM9SF4-204ENST00000442842 ANGEL1Q9UNK9 670 aaKnown RBP16.11■□□□□ 0.17
TM9SF4-204ENST00000442842 LAMA4Q16363 1823 aa16.1■□□□□ 0.17
TM9SF4-204ENST00000442842 SLC27A2O14975 620 aa16.1■□□□□ 0.17
TM9SF4-204ENST00000442842 PPP1R12BO60237 982 aaPredicted RBP16.1■□□□□ 0.17
TM9SF4-204ENST00000442842 GDF11O95390 407 aa16.1■□□□□ 0.17
TM9SF4-204ENST00000442842 CYP21A2P08686 494 aa16.1■□□□□ 0.17
TM9SF4-204ENST00000442842 CDK8P49336 464 aa16.1■□□□□ 0.17
TM9SF4-204ENST00000442842 FOXP4Q8IVH2 680 aaPredicted RBP16.1■□□□□ 0.17
TM9SF4-204ENST00000442842 NBPF3Q9H094 633 aa16.1■□□□□ 0.17
TM9SF4-204ENST00000442842 MKNK2Q9HBH9 465 aa16.1■□□□□ 0.17
TM9SF4-204ENST00000442842 SWAP70Q9UH65 585 aa16.1■□□□□ 0.17
TM9SF4-204ENST00000442842 ANAPC4Q9UJX5 808 aa16.1■□□□□ 0.17
TM9SF4-204ENST00000442842 TAF6LQ9Y6J9 622 aa16.1■□□□□ 0.17
TM9SF4-204ENST00000442842 NEDD4P46934 1319 aa16.1■□□□□ 0.17
TM9SF4-204ENST00000442842 PASKQ96RG2 1323 aa16.1■□□□□ 0.17
TM9SF4-204ENST00000442842 SHMT1P34896 483 aa16.09■□□□□ 0.17
TM9SF4-204ENST00000442842 IREB2P48200 963 aaKnown RBP16.09■□□□□ 0.17
TM9SF4-204ENST00000442842 GABPAQ06546 454 aa16.09■□□□□ 0.17
TM9SF4-204ENST00000442842 PDE4BQ07343 736 aa16.09■□□□□ 0.17
TM9SF4-204ENST00000442842 RNF20Q5VTR2 975 aa16.09■□□□□ 0.17
TM9SF4-204ENST00000442842 ARMC9Q7Z3E5 817 aa16.09■□□□□ 0.17
TM9SF4-204ENST00000442842 USP26Q9BXU7 913 aa16.09■□□□□ 0.17
TM9SF4-204ENST00000442842 GBA2Q9HCG7 927 aaPredicted RBP16.09■□□□□ 0.17
TM9SF4-204ENST00000442842 INCENPQ9NQS7 918 aa16.09■□□□□ 0.17
TM9SF4-204ENST00000442842 PAPPA2Q9BXP8 1791 aa16.08■□□□□ 0.17
TM9SF4-204ENST00000442842 MPHOSPH10O00566 681 aaKnown RBP16.08■□□□□ 0.16
TM9SF4-204ENST00000442842 TBC1D12O60347 775 aa16.08■□□□□ 0.16
TM9SF4-204ENST00000442842 NECTIN1Q15223 517 aa16.08■□□□□ 0.16
TM9SF4-204ENST00000442842 AKNAD1Q5T1N1 836 aa16.08■□□□□ 0.16
TM9SF4-204ENST00000442842 MFSD6Q6ZSS7 791 aa16.08■□□□□ 0.16
TM9SF4-204ENST00000442842 METTL16Q86W50 562 aaKnown RBP16.08■□□□□ 0.16
TM9SF4-204ENST00000442842 C2orf69Q8N8R5 385 aa16.08■□□□□ 0.16
TM9SF4-204ENST00000442842 STAG1Q8WVM7 1258 aa16.08■□□□□ 0.16
TM9SF4-204ENST00000442842 BACH2Q9BYV9 841 aa16.08■□□□□ 0.16
TM9SF4-204ENST00000442842 RNF41Q9H4P4 317 aaPredicted RBP16.08■□□□□ 0.16
TM9SF4-204ENST00000442842 UPF2Q9HAU5 1272 aaKnown RBP16.08■□□□□ 0.16
TM9SF4-204ENST00000442842 ZNF287Q9HBT7 754 aa16.08■□□□□ 0.16
TM9SF4-204ENST00000442842 TACC3Q9Y6A5 838 aa16.08■□□□□ 0.16
TM9SF4-204ENST00000442842 UBE2Q2LH0YL09 131 aa16.07■□□□□ 0.16
TM9SF4-204ENST00000442842 RANBP6O60518 1105 aaKnown RBP16.07■□□□□ 0.16
TM9SF4-204ENST00000442842 USP2O75604 605 aaPredicted RBP16.07■□□□□ 0.16
TM9SF4-204ENST00000442842 INPP5BP32019 993 aa16.07■□□□□ 0.16
TM9SF4-204ENST00000442842 HSPA4P34932 840 aa16.07■□□□□ 0.16
TM9SF4-204ENST00000442842 SHROOM1Q2M3G4 852 aaPredicted RBP16.07■□□□□ 0.16
TM9SF4-204ENST00000442842 CERKLQ49MI3 558 aaPredicted RBP16.07■□□□□ 0.16
TM9SF4-204ENST00000442842 CST9Q5W186 159 aa16.07■□□□□ 0.16
TM9SF4-204ENST00000442842 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.07■□□□□ 0.16
TM9SF4-204ENST00000442842 ZKSCAN4Q969J2 545 aaPredicted RBP16.07■□□□□ 0.16
TM9SF4-204ENST00000442842 E7EWF7 191 aa16.06■□□□□ 0.16
TM9SF4-204ENST00000442842 AKR1B1P15121 316 aa16.06■□□□□ 0.16
TM9SF4-204ENST00000442842 ZKSCAN1P17029 563 aaPredicted RBP16.06■□□□□ 0.16
TM9SF4-204ENST00000442842 RASA1P20936 1047 aa16.06■□□□□ 0.16
TM9SF4-204ENST00000442842 TRDNQ13061 729 aa16.06■□□□□ 0.16
TM9SF4-204ENST00000442842 RRP1BQ14684 758 aaKnown RBP16.06■□□□□ 0.16
TM9SF4-204ENST00000442842 FAM47AQ5JRC9 791 aa16.06■□□□□ 0.16
TM9SF4-204ENST00000442842 TATDN1Q6P1N9 297 aa16.06■□□□□ 0.16
TM9SF4-204ENST00000442842 STOX1Q6ZVD7 989 aa16.06■□□□□ 0.16
TM9SF4-204ENST00000442842 RALYLQ86SE5 291 aaKnown RBP16.06■□□□□ 0.16
TM9SF4-204ENST00000442842 ZNF444Q8N0Y2 327 aaPredicted RBP16.06■□□□□ 0.16
TM9SF4-204ENST00000442842 KLRG1Q96E93 195 aa16.06■□□□□ 0.16
TM9SF4-204ENST00000442842 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.06■□□□□ 0.16
TM9SF4-204ENST00000442842 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.06■□□□□ 0.16
TM9SF4-204ENST00000442842 CSADQ9Y600 493 aa16.06■□□□□ 0.16
TM9SF4-204ENST00000442842 TSPY2A6NKD2 308 aa16.05■□□□□ 0.16
TM9SF4-204ENST00000442842 PHF20L1A8MW92 1017 aa16.05■□□□□ 0.16
TM9SF4-204ENST00000442842 B4E1Z4 1266 aa16.05■□□□□ 0.16
TM9SF4-204ENST00000442842 EPB41L2O43491 1005 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms