RNA–Protein interactions for RNA: ENST00000441728.6

UBE2F-215, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-215ENST00000441728 AS3MTQ9HBK9 375 aa24.57■■□□□ 1.52
UBE2F-215ENST00000441728 HMG20BQ9P0W2 317 aa24.57■■□□□ 1.52
UBE2F-215ENST00000441728 RBM27Q9P2N5 1060 aaKnown RBP24.57■■□□□ 1.52
UBE2F-215ENST00000441728 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.57■■□□□ 1.52
UBE2F-215ENST00000441728 GCLCP48506 637 aaPredicted RBP24.56■■□□□ 1.52
UBE2F-215ENST00000441728 RARSP54136 660 aaKnown RBP24.56■■□□□ 1.52
UBE2F-215ENST00000441728 RHBDL3P58872 404 aa24.56■■□□□ 1.52
UBE2F-215ENST00000441728 FAM110CQ1W6H9 321 aa24.56■■□□□ 1.52
UBE2F-215ENST00000441728 ZNF280CQ8ND82 737 aa24.56■■□□□ 1.52
UBE2F-215ENST00000441728 ARHGAP45Q92619 1136 aa24.56■■□□□ 1.52
UBE2F-215ENST00000441728 TRIM34Q9BYJ4 488 aa24.56■■□□□ 1.52
UBE2F-215ENST00000441728 GNAI2P04899 355 aa24.55■■□□□ 1.52
UBE2F-215ENST00000441728 UQCRFS1P1P0C7P4 283 aa24.55■■□□□ 1.52
UBE2F-215ENST00000441728 TREML2Q5T2D2 321 aa24.55■■□□□ 1.52
UBE2F-215ENST00000441728 PTPRFP10586 1907 aa24.55■■□□□ 1.52
UBE2F-215ENST00000441728 USP17L5A8MUK1 530 aa24.54■■□□□ 1.52
UBE2F-215ENST00000441728 BAG3O95817 575 aa24.54■■□□□ 1.52
UBE2F-215ENST00000441728 MTX1Q13505 466 aa24.54■■□□□ 1.52
UBE2F-215ENST00000441728 TBC1D9Q6ZT07 1266 aa24.54■■□□□ 1.52
UBE2F-215ENST00000441728 UBE2Q1Q7Z7E8 422 aa24.54■■□□□ 1.52
UBE2F-215ENST00000441728 NSUN4Q96CB9 384 aaKnown RBP24.54■■□□□ 1.52
UBE2F-215ENST00000441728 HMGCS2P54868 508 aa24.53■■□□□ 1.52
UBE2F-215ENST00000441728 OS9Q13438 667 aaPredicted RBP24.53■■□□□ 1.52
UBE2F-215ENST00000441728 HERC5Q9UII4 1024 aaKnown RBP24.53■■□□□ 1.52
UBE2F-215ENST00000441728 PHIPQ8WWQ0 1821 aa24.52■■□□□ 1.52
UBE2F-215ENST00000441728 CAP2P40123 477 aa24.52■■□□□ 1.52
UBE2F-215ENST00000441728 IRX3P78415 501 aaPredicted RBP24.52■■□□□ 1.52
UBE2F-215ENST00000441728 TTC39AQ5SRH9 613 aa24.52■■□□□ 1.52
UBE2F-215ENST00000441728 PI16Q6UXB8 463 aa24.52■■□□□ 1.52
UBE2F-215ENST00000441728 FRAT1Q92837 279 aaPredicted RBP24.52■■□□□ 1.52
UBE2F-215ENST00000441728 TMOD4Q9NZQ9 345 aa24.52■■□□□ 1.52
UBE2F-215ENST00000441728 CEP290O15078 2479 aa24.52■■□□□ 1.52
UBE2F-215ENST00000441728 COL2A1P02458 1487 aaPredicted RBP24.51■■□□□ 1.51
UBE2F-215ENST00000441728 ZBTB7BO15156 539 aaPredicted RBP24.51■■□□□ 1.51
UBE2F-215ENST00000441728 PLCG2P16885 1265 aa24.51■■□□□ 1.51
UBE2F-215ENST00000441728 ARID4AP29374 1257 aaPredicted RBP24.51■■□□□ 1.51
UBE2F-215ENST00000441728 NAA16Q6N069 864 aaPredicted RBP24.51■■□□□ 1.51
UBE2F-215ENST00000441728 CRACR2BQ8N4Y2 399 aaPredicted RBP24.51■■□□□ 1.51
UBE2F-215ENST00000441728 DHX36Q9H2U1 1008 aaKnown RBP24.51■■□□□ 1.51
UBE2F-215ENST00000441728 CCDC158Q5M9N0 1113 aa24.5■■□□□ 1.51
UBE2F-215ENST00000441728 NECAB2Q7Z6G3 386 aa24.5■■□□□ 1.51
UBE2F-215ENST00000441728 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.5■■□□□ 1.51
UBE2F-215ENST00000441728 PI4KBQ9UBF8 816 aa24.5■■□□□ 1.51
UBE2F-215ENST00000441728 TRIOBPQ9H2D6 2365 aa24.49■■□□□ 1.51
UBE2F-215ENST00000441728 HMGCRP04035 888 aa24.49■■□□□ 1.51
UBE2F-215ENST00000441728 CCAR1Q8IX12 1150 aaKnown RBP24.49■■□□□ 1.51
UBE2F-215ENST00000441728 ASCC2Q9H1I8 757 aaPredicted RBP24.49■■□□□ 1.51
UBE2F-215ENST00000441728 PAK6Q9NQU5 681 aaPredicted RBP24.49■■□□□ 1.51
UBE2F-215ENST00000441728 ASNSP08243 561 aa24.48■■□□□ 1.51
UBE2F-215ENST00000441728 MCAMP43121 646 aa24.48■■□□□ 1.51
UBE2F-215ENST00000441728 SH3RF3Q8TEJ3 882 aaPredicted RBP24.48■■□□□ 1.51
UBE2F-215ENST00000441728 ZNF384Q8TF68 577 aa24.48■■□□□ 1.51
UBE2F-215ENST00000441728 PAWRQ96IZ0 340 aaKnown RBP24.48■■□□□ 1.51
UBE2F-215ENST00000441728 ATAD5Q96QE3 1844 aa24.48■■□□□ 1.51
UBE2F-215ENST00000441728 HMX1Q9NP08 348 aaPredicted RBP24.48■■□□□ 1.51
UBE2F-215ENST00000441728 AATFQ9NY61 560 aaKnown RBP eCLIP24.48■■□□□ 1.51
UBE2F-215ENST00000441728 ATF7IPQ6VMQ6 1270 aa24.47■■□□□ 1.51
UBE2F-215ENST00000441728 CLUAP1Q96AJ1 413 aa24.47■■□□□ 1.51
UBE2F-215ENST00000441728 MTMR2Q13614 643 aa24.46■■□□□ 1.51
UBE2F-215ENST00000441728 CWC22Q9HCG8 908 aaKnown RBP24.46■■□□□ 1.51
UBE2F-215ENST00000441728 SNRKQ9NRH2 765 aa24.46■■□□□ 1.51
UBE2F-215ENST00000441728 LOC285556D6RIA3 1793 aa24.46■■□□□ 1.51
UBE2F-215ENST00000441728 RPTORQ8N122 1335 aa24.45■■□□□ 1.5
UBE2F-215ENST00000441728 PNMA6EA0A0J9YXQ4 647 aa24.45■■□□□ 1.5
UBE2F-215ENST00000441728 A0A1W2PPC1 479 aa24.45■■□□□ 1.5
UBE2F-215ENST00000441728 TRIM27P14373 513 aa24.45■■□□□ 1.5
UBE2F-215ENST00000441728 PDE3AQ14432 1141 aa24.45■■□□□ 1.5
UBE2F-215ENST00000441728 SH3D19Q5HYK7 790 aa24.45■■□□□ 1.5
UBE2F-215ENST00000441728 MAPKAPK5Q8IW41 473 aa24.45■■□□□ 1.5
UBE2F-215ENST00000441728 ANKLE1Q8NAG6 615 aa24.45■■□□□ 1.5
UBE2F-215ENST00000441728 TGFBRAP1Q8WUH2 860 aa24.45■■□□□ 1.5
UBE2F-215ENST00000441728 CRISPLD2Q9H0B8 497 aa24.45■■□□□ 1.5
UBE2F-215ENST00000441728 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.45■■□□□ 1.5
UBE2F-215ENST00000441728 HLA-DOAP06340 250 aa24.44■■□□□ 1.5
UBE2F-215ENST00000441728 C19orf81C9J6K1 198 aa24.43■■□□□ 1.5
UBE2F-215ENST00000441728 BACE1P56817 501 aa24.43■■□□□ 1.5
UBE2F-215ENST00000441728 FOXP4Q8IVH2 680 aaPredicted RBP24.43■■□□□ 1.5
UBE2F-215ENST00000441728 WDR18Q9BV38 432 aa24.43■■□□□ 1.5
UBE2F-215ENST00000441728 CYP2B6P20813 491 aa24.42■■□□□ 1.5
UBE2F-215ENST00000441728 TNNI3KQ59H18 835 aa24.42■■□□□ 1.5
UBE2F-215ENST00000441728 C7orf61Q8IZ16 206 aa24.42■■□□□ 1.5
UBE2F-215ENST00000441728 GPRC5AQ8NFJ5 357 aa24.42■■□□□ 1.5
UBE2F-215ENST00000441728 SOCS4Q8WXH5 440 aa24.42■■□□□ 1.5
UBE2F-215ENST00000441728 NUDT12Q9BQG2 462 aa24.42■■□□□ 1.5
UBE2F-215ENST00000441728 NBPF3Q9H094 633 aa24.42■■□□□ 1.5
UBE2F-215ENST00000441728 GINM1Q9NU53 330 aa24.42■■□□□ 1.5
UBE2F-215ENST00000441728 STAP2Q9UGK3 403 aa24.42■■□□□ 1.5
UBE2F-215ENST00000441728 FPGT-TNNI3KV9GXZ4 949 aa24.42■■□□□ 1.5
UBE2F-215ENST00000441728 DOCK3Q8IZD9 2030 aa24.41■■□□□ 1.5
UBE2F-215ENST00000441728 USP17L10C9JJH3 530 aa24.41■■□□□ 1.5
UBE2F-215ENST00000441728 RRP1BQ14684 758 aaKnown RBP24.41■■□□□ 1.5
UBE2F-215ENST00000441728 GPR108Q9NPR9 543 aa24.41■■□□□ 1.5
UBE2F-215ENST00000441728 MORF4L1Q9UBU8 362 aa24.41■■□□□ 1.5
UBE2F-215ENST00000441728 MAST2Q6P0Q8 1798 aa24.41■■□□□ 1.5
UBE2F-215ENST00000441728 FLT1P17948 1338 aa24.4■■□□□ 1.5
UBE2F-215ENST00000441728 SURF6O75683 361 aaKnown RBP24.4■■□□□ 1.5
UBE2F-215ENST00000441728 GDF11O95390 407 aa24.4■■□□□ 1.5
UBE2F-215ENST00000441728 DIS3LQ8TF46 1054 aaKnown RBP24.4■■□□□ 1.5
UBE2F-215ENST00000441728 GTF3C2Q8WUA4 911 aaPredicted RBP24.4■■□□□ 1.5
UBE2F-215ENST00000441728 DBNDD2Q9BQY9 259 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms