RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 SKIV2LQ15477 1246 aaKnown RBP7.98□□□□□ -1.13
HDAC6-210ENST00000441703 TAF7LQ5H9L4 462 aa7.98□□□□□ -1.13
HDAC6-210ENST00000441703 UBE3BQ7Z3V4 1068 aa7.98□□□□□ -1.13
HDAC6-210ENST00000441703 VPS37DQ86XT2 251 aa7.98□□□□□ -1.13
HDAC6-210ENST00000441703 MICALL1Q8N3F8 863 aa7.98□□□□□ -1.13
HDAC6-210ENST00000441703 TDRD7Q8NHU6 1098 aaKnown RBP7.98□□□□□ -1.13
HDAC6-210ENST00000441703 TBC1D22AQ8WUA7 517 aa7.98□□□□□ -1.13
HDAC6-210ENST00000441703 ZDHHC15Q96MV8 337 aa7.98□□□□□ -1.13
HDAC6-210ENST00000441703 CWC22Q9HCG8 908 aaKnown RBP7.98□□□□□ -1.13
HDAC6-210ENST00000441703 RRAGDQ9NQL2 400 aaPredicted RBP7.98□□□□□ -1.13
HDAC6-210ENST00000441703 MBIPQ9NS73 344 aa7.98□□□□□ -1.13
HDAC6-210ENST00000441703 CXXC1Q9P0U4 656 aaPredicted RBP7.98□□□□□ -1.13
HDAC6-210ENST00000441703 RCAN3Q9UKA8 241 aa7.98□□□□□ -1.13
HDAC6-210ENST00000441703 MAP3K2Q9Y2U5 619 aa7.98□□□□□ -1.13
HDAC6-210ENST00000441703 CHMP3Q9Y3E7 222 aa7.98□□□□□ -1.13
HDAC6-210ENST00000441703 AFG3L2Q9Y4W6 797 aa7.98□□□□□ -1.13
HDAC6-210ENST00000441703 CACNA1FO60840 1977 aa7.98□□□□□ -1.13
HDAC6-210ENST00000441703 MUC6Q6W4X9 2439 aa7.97□□□□□ -1.13
HDAC6-210ENST00000441703 NEURL1BA8MQ27 555 aa7.97□□□□□ -1.13
HDAC6-210ENST00000441703 KBTBD13C9JR72 458 aa7.97□□□□□ -1.13
HDAC6-210ENST00000441703 H7C1W4 665 aa7.97□□□□□ -1.13
HDAC6-210ENST00000441703 SMIM22K7EJ46 135 aa7.97□□□□□ -1.13
HDAC6-210ENST00000441703 DNM1LO00429 736 aa7.97□□□□□ -1.13
HDAC6-210ENST00000441703 MSCO60682 206 aa7.97□□□□□ -1.13
HDAC6-210ENST00000441703 XRCC5P13010 732 aaKnown RBP7.97□□□□□ -1.13
HDAC6-210ENST00000441703 BMP1P13497 986 aa7.97□□□□□ -1.13
HDAC6-210ENST00000441703 PTPRAP18433 802 aa7.97□□□□□ -1.13
HDAC6-210ENST00000441703 CNGA1P29973 690 aa7.97□□□□□ -1.13
HDAC6-210ENST00000441703 RGS2P41220 211 aa7.97□□□□□ -1.13
HDAC6-210ENST00000441703 NEUROD2Q15784 382 aa7.97□□□□□ -1.13
HDAC6-210ENST00000441703 KSR2Q6VAB6 950 aa7.97□□□□□ -1.13
HDAC6-210ENST00000441703 CHMP4AQ9BY43 222 aa7.97□□□□□ -1.13
HDAC6-210ENST00000441703 PDLIM7Q9NR12 457 aa7.97□□□□□ -1.13
HDAC6-210ENST00000441703 LRRFIP2Q9Y608 721 aaKnown RBP7.97□□□□□ -1.13
HDAC6-210ENST00000441703 MYBBP1AQ9BQG0 1328 aaKnown RBP7.97□□□□□ -1.13
HDAC6-210ENST00000441703 FRMPD3Q5JV73 1810 aa7.96□□□□□ -1.13
HDAC6-210ENST00000441703 MYCNP04198 464 aaPredicted RBP7.96□□□□□ -1.14
HDAC6-210ENST00000441703 CSF1RP07333 972 aa7.96□□□□□ -1.14
HDAC6-210ENST00000441703 ZNF853P0CG23 659 aa7.96□□□□□ -1.14
HDAC6-210ENST00000441703 GYG1P46976 350 aa7.96□□□□□ -1.14
HDAC6-210ENST00000441703 IFIT5Q13325 482 aaKnown RBP7.96□□□□□ -1.14
HDAC6-210ENST00000441703 TRIM60Q495X7 471 aa7.96□□□□□ -1.14
HDAC6-210ENST00000441703 TREML2Q5T2D2 321 aa7.96□□□□□ -1.14
HDAC6-210ENST00000441703 MFSD14CQ5VZR4 134 aa7.96□□□□□ -1.14
HDAC6-210ENST00000441703 SLC39A5Q6ZMH5 540 aa7.96□□□□□ -1.14
HDAC6-210ENST00000441703 PROCA1Q8NCQ7 364 aaPredicted RBP7.96□□□□□ -1.14
HDAC6-210ENST00000441703 LPAR1Q92633 364 aa7.96□□□□□ -1.14
HDAC6-210ENST00000441703 UIMC1Q96RL1 719 aa7.96□□□□□ -1.14
HDAC6-210ENST00000441703 CNNM1Q9NRU3 951 aa7.96□□□□□ -1.14
HDAC6-210ENST00000441703 DDX20Q9UHI6 824 aaKnown RBP7.96□□□□□ -1.14
HDAC6-210ENST00000441703 PLXNB2O15031 1838 aa7.95□□□□□ -1.14
HDAC6-210ENST00000441703 PI4KAP2A4QPH2 592 aa7.95□□□□□ -1.14
HDAC6-210ENST00000441703 RAG1P15918 1043 aa7.95□□□□□ -1.14
HDAC6-210ENST00000441703 KCNQ1P51787 676 aa7.95□□□□□ -1.14
HDAC6-210ENST00000441703 CASP7P55210 303 aa7.95□□□□□ -1.14
HDAC6-210ENST00000441703 NHLH1Q02575 133 aa7.95□□□□□ -1.14
HDAC6-210ENST00000441703 TFF2Q03403 129 aa7.95□□□□□ -1.14
HDAC6-210ENST00000441703 FPGSQ05932 587 aa7.95□□□□□ -1.14
HDAC6-210ENST00000441703 GRIK5Q16478 980 aa7.95□□□□□ -1.14
HDAC6-210ENST00000441703 CCL14Q16627 93 aa7.95□□□□□ -1.14
HDAC6-210ENST00000441703 CWF19L2Q2TBE0 894 aaKnown RBP7.95□□□□□ -1.14
HDAC6-210ENST00000441703 CCDC30Q5VVM6 783 aa7.95□□□□□ -1.14
HDAC6-210ENST00000441703 APOBEC3HQ6NTF7 200 aaKnown RBP7.95□□□□□ -1.14
HDAC6-210ENST00000441703 CCDC146Q8IYE0 955 aa7.95□□□□□ -1.14
HDAC6-210ENST00000441703 PI4KAP1Q8N8J0 262 aa7.95□□□□□ -1.14
HDAC6-210ENST00000441703 ARRDC4Q8NCT1 418 aa7.95□□□□□ -1.14
HDAC6-210ENST00000441703 RUNDC1Q96C34 613 aa7.95□□□□□ -1.14
HDAC6-210ENST00000441703 APBA2Q99767 749 aa7.95□□□□□ -1.14
HDAC6-210ENST00000441703 IFT57Q9NWB7 429 aa7.95□□□□□ -1.14
HDAC6-210ENST00000441703 IQSEC3Q9UPP2 1182 aaPredicted RBP7.95□□□□□ -1.14
HDAC6-210ENST00000441703 DOCK2Q92608 1830 aa7.94□□□□□ -1.14
HDAC6-210ENST00000441703 MYH13Q9UKX3 1938 aa7.94□□□□□ -1.14
HDAC6-210ENST00000441703 TRIM43BA6NCK2 446 aa7.94□□□□□ -1.14
HDAC6-210ENST00000441703 PRR33A8MZF0 331 aa7.94□□□□□ -1.14
HDAC6-210ENST00000441703 MAPK4P31152 587 aa7.94□□□□□ -1.14
HDAC6-210ENST00000441703 IRX3P78415 501 aaPredicted RBP7.94□□□□□ -1.14
HDAC6-210ENST00000441703 FOXK2Q01167 660 aa7.94□□□□□ -1.14
HDAC6-210ENST00000441703 UBE4AQ14139 1066 aa7.94□□□□□ -1.14
HDAC6-210ENST00000441703 ADGRE1Q14246 886 aa7.94□□□□□ -1.14
HDAC6-210ENST00000441703 GCKRQ14397 625 aa7.94□□□□□ -1.14
HDAC6-210ENST00000441703 CSPP1Q1MSJ5 1256 aa7.94□□□□□ -1.14
HDAC6-210ENST00000441703 GJC2Q5T442 439 aaPredicted RBP7.94□□□□□ -1.14
HDAC6-210ENST00000441703 CCDC174Q6PII3 467 aa7.94□□□□□ -1.14
HDAC6-210ENST00000441703 HHIPL2Q6UWX4 724 aa7.94□□□□□ -1.14
HDAC6-210ENST00000441703 LDHAL6AQ6ZMR3 332 aa7.94□□□□□ -1.14
HDAC6-210ENST00000441703 SH3RF1Q7Z6J0 888 aa7.94□□□□□ -1.14
HDAC6-210ENST00000441703 ZSCAN29Q8IWY8 852 aaPredicted RBP7.94□□□□□ -1.14
HDAC6-210ENST00000441703 TRIM43Q96BQ3 446 aaPredicted RBP7.94□□□□□ -1.14
HDAC6-210ENST00000441703 MRIQ9BWK5 157 aa7.94□□□□□ -1.14
HDAC6-210ENST00000441703 ASCC2Q9H1I8 757 aaPredicted RBP7.94□□□□□ -1.14
HDAC6-210ENST00000441703 MORF4L1Q9UBU8 362 aa7.94□□□□□ -1.14
HDAC6-210ENST00000441703 MSRAQ9UJ68 235 aa7.94□□□□□ -1.14
HDAC6-210ENST00000441703 TACC3Q9Y6A5 838 aa7.94□□□□□ -1.14
HDAC6-210ENST00000441703 ELL2O00472 640 aaPredicted RBP7.93□□□□□ -1.14
HDAC6-210ENST00000441703 CTNND1O60716 968 aaKnown RBP7.93□□□□□ -1.14
HDAC6-210ENST00000441703 TPM2P07951 284 aa7.93□□□□□ -1.14
HDAC6-210ENST00000441703 CLTBP09497 229 aa7.93□□□□□ -1.14
HDAC6-210ENST00000441703 EPHB4P54760 987 aa7.93□□□□□ -1.14
HDAC6-210ENST00000441703 GNAI1P63096 354 aa7.93□□□□□ -1.14
HDAC6-210ENST00000441703 RALBP1Q15311 655 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms