RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 RAI14Q9P0K7 980 aa9.49□□□□□ -0.89
SPIRE1-204ENST00000440472 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.49□□□□□ -0.89
SPIRE1-204ENST00000440472 LEMD3Q9Y2U8 911 aa9.49□□□□□ -0.89
SPIRE1-204ENST00000440472 GOLGA6L19H0YKK7 550 aa9.49□□□□□ -0.89
SPIRE1-204ENST00000440472 DDAH1O94760 285 aa9.49□□□□□ -0.89
SPIRE1-204ENST00000440472 POLR3DP05423 398 aaPredicted RBP9.49□□□□□ -0.89
SPIRE1-204ENST00000440472 HIBADHP31937 336 aaKnown RBP9.49□□□□□ -0.89
SPIRE1-204ENST00000440472 GYG1P46976 350 aa9.49□□□□□ -0.89
SPIRE1-204ENST00000440472 NDUFA8P51970 172 aa9.49□□□□□ -0.89
SPIRE1-204ENST00000440472 RILPL1Q5EBL4 403 aa9.49□□□□□ -0.89
SPIRE1-204ENST00000440472 RESP18Q5W5W9 173 aa9.49□□□□□ -0.89
SPIRE1-204ENST00000440472 NBPF5PQ86XG9 351 aaPredicted RBP9.49□□□□□ -0.89
SPIRE1-204ENST00000440472 NOSTRINQ8IVI9 506 aa9.49□□□□□ -0.89
SPIRE1-204ENST00000440472 ZNF654Q8IZM8 581 aa9.49□□□□□ -0.89
SPIRE1-204ENST00000440472 FAM177A1Q8N128 213 aaPredicted RBP9.49□□□□□ -0.89
SPIRE1-204ENST00000440472 PRIMPOLQ96LW4 560 aa9.49□□□□□ -0.89
SPIRE1-204ENST00000440472 TUBE1Q9UJT0 475 aa9.49□□□□□ -0.89
SPIRE1-204ENST00000440472 ZNF202O95125 648 aa9.48□□□□□ -0.89
SPIRE1-204ENST00000440472 GTF2E1P29083 439 aaPredicted RBP9.48□□□□□ -0.89
SPIRE1-204ENST00000440472 FOSBP53539 338 aa9.48□□□□□ -0.89
SPIRE1-204ENST00000440472 NLRP12P59046 1061 aa9.48□□□□□ -0.89
SPIRE1-204ENST00000440472 ADGRA1Q86SQ6 560 aa9.48□□□□□ -0.89
SPIRE1-204ENST00000440472 DHX40Q8IX18 779 aaKnown RBP9.48□□□□□ -0.89
SPIRE1-204ENST00000440472 SDF4Q9BRK5 362 aa9.48□□□□□ -0.89
SPIRE1-204ENST00000440472 UBAC1Q9BSL1 405 aa9.48□□□□□ -0.89
SPIRE1-204ENST00000440472 IKBKBO14920 756 aa9.47□□□□□ -0.89
SPIRE1-204ENST00000440472 PRPF3O43395 683 aaKnown RBP9.47□□□□□ -0.89
SPIRE1-204ENST00000440472 BMP15O95972 392 aa9.47□□□□□ -0.89
SPIRE1-204ENST00000440472 PFKFB1P16118 471 aa9.47□□□□□ -0.89
SPIRE1-204ENST00000440472 FUT2Q10981 343 aa9.47□□□□□ -0.89
SPIRE1-204ENST00000440472 CCDC178Q5BJE1 867 aa9.47□□□□□ -0.89
SPIRE1-204ENST00000440472 C11orf57Q6ZUT1 292 aaPredicted RBP9.47□□□□□ -0.89
SPIRE1-204ENST00000440472 ZNF384Q8TF68 577 aa9.47□□□□□ -0.89
SPIRE1-204ENST00000440472 ANKS1AQ92625 1134 aa9.47□□□□□ -0.89
SPIRE1-204ENST00000440472 ZSCAN10Q96SZ4 725 aaPredicted RBP9.47□□□□□ -0.89
SPIRE1-204ENST00000440472 SLC26A6Q9BXS9 759 aa9.47□□□□□ -0.89
SPIRE1-204ENST00000440472 CRNKL1Q9BZJ0 848 aaKnown RBP9.47□□□□□ -0.89
SPIRE1-204ENST00000440472 KCNF1Q9H3M0 494 aa9.47□□□□□ -0.89
SPIRE1-204ENST00000440472 KCND1Q9NSA2 647 aa9.47□□□□□ -0.89
SPIRE1-204ENST00000440472 ARPP21Q9UBL0 812 aaPredicted RBP9.47□□□□□ -0.89
SPIRE1-204ENST00000440472 CCNL1Q9UK58 526 aaPredicted RBP9.47□□□□□ -0.89
SPIRE1-204ENST00000440472 CEP131Q9UPN4 1083 aa9.47□□□□□ -0.89
SPIRE1-204ENST00000440472 A0A0G2JS52 829 aa9.47□□□□□ -0.89
SPIRE1-204ENST00000440472 A0A1B0GVL5 298 aa9.47□□□□□ -0.89
SPIRE1-204ENST00000440472 SMTNL1A8MU46 457 aa9.47□□□□□ -0.89
SPIRE1-204ENST00000440472 WDHD1O75717 1129 aaPredicted RBP9.47□□□□□ -0.89
SPIRE1-204ENST00000440472 SLC3A2P08195 630 aaKnown RBP9.47□□□□□ -0.89
SPIRE1-204ENST00000440472 XBP1P17861 261 aa9.47□□□□□ -0.89
SPIRE1-204ENST00000440472 CTR9Q6PD62 1173 aa9.47□□□□□ -0.89
SPIRE1-204ENST00000440472 IQCA1Q86XH1 822 aa9.47□□□□□ -0.89
SPIRE1-204ENST00000440472 MIGA1Q8NAN2 632 aa9.47□□□□□ -0.89
SPIRE1-204ENST00000440472 ARHGEF1Q92888 912 aaKnown RBP9.47□□□□□ -0.89
SPIRE1-204ENST00000440472 PHKBQ93100 1093 aa9.47□□□□□ -0.89
SPIRE1-204ENST00000440472 C8orf37Q96NL8 207 aa9.47□□□□□ -0.89
SPIRE1-204ENST00000440472 TRIM5Q9C035 493 aa9.47□□□□□ -0.89
SPIRE1-204ENST00000440472 USP21Q9UK80 565 aa9.47□□□□□ -0.89
SPIRE1-204ENST00000440472 TAF1P21675 1872 aa9.47□□□□□ -0.89
SPIRE1-204ENST00000440472 ROBO3Q96MS0 1386 aa9.46□□□□□ -0.89
SPIRE1-204ENST00000440472 TNKSO95271 1327 aa9.46□□□□□ -0.89
SPIRE1-204ENST00000440472 GNPATO15228 680 aa9.46□□□□□ -0.89
SPIRE1-204ENST00000440472 PTPREP23469 700 aa9.46□□□□□ -0.89
SPIRE1-204ENST00000440472 SYKP43405 635 aa9.46□□□□□ -0.89
SPIRE1-204ENST00000440472 PPP4CP60510 307 aa9.46□□□□□ -0.89
SPIRE1-204ENST00000440472 GRAPQ13588 217 aa9.46□□□□□ -0.89
SPIRE1-204ENST00000440472 TPRNQ4KMQ1 711 aa9.46□□□□□ -0.89
SPIRE1-204ENST00000440472 CT47A1Q5JQC4 288 aaPredicted RBP9.46□□□□□ -0.89
SPIRE1-204ENST00000440472 KRI1Q8N9T8 703 aaKnown RBP9.46□□□□□ -0.89
SPIRE1-204ENST00000440472 WDR66Q8TBY9 1149 aa9.46□□□□□ -0.89
SPIRE1-204ENST00000440472 GRAPLQ8TC17 118 aaPredicted RBP9.46□□□□□ -0.89
SPIRE1-204ENST00000440472 AIFM3Q96NN9 605 aa9.46□□□□□ -0.89
SPIRE1-204ENST00000440472 TTC12Q9H892 705 aaPredicted RBP9.46□□□□□ -0.89
SPIRE1-204ENST00000440472 INCENPQ9NQS7 918 aa9.46□□□□□ -0.89
SPIRE1-204ENST00000440472 IMPACTQ9P2X3 320 aa9.46□□□□□ -0.89
SPIRE1-204ENST00000440472 ABCF2Q9UG63 623 aa9.46□□□□□ -0.89
SPIRE1-204ENST00000440472 MYH6P13533 1939 aa9.46□□□□□ -0.9
SPIRE1-204ENST00000440472 BECN2A8MW95 431 aa9.46□□□□□ -0.9
SPIRE1-204ENST00000440472 MECOMQ03112 1051 aa9.46□□□□□ -0.9
SPIRE1-204ENST00000440472 GNL2Q13823 731 aaKnown RBP9.46□□□□□ -0.9
SPIRE1-204ENST00000440472 TRAPPC3LQ5T215 181 aa9.46□□□□□ -0.9
SPIRE1-204ENST00000440472 SHC4Q6S5L8 630 aa9.46□□□□□ -0.9
SPIRE1-204ENST00000440472 CATIPQ7Z7H3 387 aa9.46□□□□□ -0.9
SPIRE1-204ENST00000440472 ENAHQ8N8S7 591 aaPredicted RBP9.46□□□□□ -0.9
SPIRE1-204ENST00000440472 GJB4Q9NTQ9 266 aa9.46□□□□□ -0.9
SPIRE1-204ENST00000440472 HOOK1Q9UJC3 728 aaKnown RBP9.46□□□□□ -0.9
SPIRE1-204ENST00000440472 TNRC6CQ9HCJ0 1690 aaKnown RBP9.45□□□□□ -0.9
SPIRE1-204ENST00000440472 MYH2Q9UKX2 1941 aa9.45□□□□□ -0.9
SPIRE1-204ENST00000440472 DYNC1I1O14576 645 aa9.45□□□□□ -0.9
SPIRE1-204ENST00000440472 GTF2F1P35269 517 aaKnown RBP eCLIP9.45□□□□□ -0.9
SPIRE1-204ENST00000440472 TPM4P67936 248 aa9.45□□□□□ -0.9
SPIRE1-204ENST00000440472 GSTO1P78417 241 aa9.45□□□□□ -0.9
SPIRE1-204ENST00000440472 TROAPQ12815 778 aa9.45□□□□□ -0.9
SPIRE1-204ENST00000440472 NT5DC1Q5TFE4 455 aa9.45□□□□□ -0.9
SPIRE1-204ENST00000440472 KANK3Q6NY19 840 aa9.45□□□□□ -0.9
SPIRE1-204ENST00000440472 RAB11FIP4Q86YS3 637 aa9.45□□□□□ -0.9
SPIRE1-204ENST00000440472 DIS3L2Q8IYB7 885 aaKnown RBP9.45□□□□□ -0.9
SPIRE1-204ENST00000440472 SDR42E1Q8WUS8 393 aa9.45□□□□□ -0.9
SPIRE1-204ENST00000440472 OSBPL5Q9H0X9 879 aaPredicted RBP9.45□□□□□ -0.9
SPIRE1-204ENST00000440472 DCP1AQ9NPI6 582 aaPredicted RBP9.45□□□□□ -0.9
SPIRE1-204ENST00000440472 TCP11L1Q9NUJ3 509 aa9.45□□□□□ -0.9
SPIRE1-204ENST00000440472 SRP68Q9UHB9 627 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms