RNA–Protein interactions for RNA: ENST00000440431.6

SCN3A-204, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 4,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-204ENST00000440431 CEBPZQ03701 1054 aaKnown RBP5.2□□□□□ -1.58
SCN3A-204ENST00000440431 NFKBIBQ15653 356 aa5.2□□□□□ -1.58
SCN3A-204ENST00000440431 CCDC93Q567U6 631 aa5.2□□□□□ -1.58
SCN3A-204ENST00000440431 CAVIN1Q6NZI2 390 aaKnown RBP5.2□□□□□ -1.58
SCN3A-204ENST00000440431 MICU3Q86XE3 530 aa5.2□□□□□ -1.58
SCN3A-204ENST00000440431 HELBQ8NG08 1087 aaPredicted RBP5.2□□□□□ -1.58
SCN3A-204ENST00000440431 NKX2-3Q8TAU0 364 aa5.2□□□□□ -1.58
SCN3A-204ENST00000440431 CHURC1Q8WUH1 139 aa5.2□□□□□ -1.58
SCN3A-204ENST00000440431 SLC26A6Q9BXS9 759 aa5.2□□□□□ -1.58
SCN3A-204ENST00000440431 LSG1Q9H089 658 aaKnown RBP5.2□□□□□ -1.58
SCN3A-204ENST00000440431 DEF6Q9H4E7 631 aa5.2□□□□□ -1.58
SCN3A-204ENST00000440431 IVNS1ABPQ9Y6Y0 642 aa5.2□□□□□ -1.58
SCN3A-204ENST00000440431 CDK5RAP2Q96SN8 1893 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 ZBED4O75132 1171 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 TRIM37O94972 964 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 PARP1P09874 1014 aaKnown RBP5.19□□□□□ -1.58
SCN3A-204ENST00000440431 FGFR2P21802 821 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 PICALMQ13492 652 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 CCDC102BQ68D86 513 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 BRAPQ7Z569 592 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 FMNL3Q8IVF7 1028 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 INTS4Q96HW7 963 aaKnown RBP5.19□□□□□ -1.58
SCN3A-204ENST00000440431 GREM2Q9H772 168 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 ARPP21Q9UBL0 812 aaPredicted RBP5.19□□□□□ -1.58
SCN3A-204ENST00000440431 CSADQ9Y600 493 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 NDUFB9Q9Y6M9 179 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 STX6O43752 255 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 KDM4AO75164 1064 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 ERLIN2O94905 339 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 NASPP49321 788 aaPredicted RBP5.19□□□□□ -1.58
SCN3A-204ENST00000440431 NAPAP54920 295 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 SPAG1Q07617 926 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 NMIQ13287 307 aaPredicted RBP5.19□□□□□ -1.58
SCN3A-204ENST00000440431 SCARF1Q14162 830 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 RC3H1Q5TC82 1133 aaKnown RBP5.19□□□□□ -1.58
SCN3A-204ENST00000440431 CCDC125Q86Z20 511 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 SLC16A10Q8TF71 515 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 BRF1Q92994 677 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 SNX21Q969T3 373 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 LLPHQ9BRT6 129 aaKnown RBP5.19□□□□□ -1.58
SCN3A-204ENST00000440431 ALG1Q9BT22 464 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 RRAGDQ9NQL2 400 aaPredicted RBP5.19□□□□□ -1.58
SCN3A-204ENST00000440431 BCS1LQ9Y276 419 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 DUOX1Q9NRD9 1551 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 TBCAO75347 108 aaKnown RBP5.19□□□□□ -1.58
SCN3A-204ENST00000440431 MBD4O95243 580 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 HAND2P61296 217 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 SUPT20HL1Q3ZLR7 823 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 USPL1Q5W0Q7 1092 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 PAF1Q8N7H5 531 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 SPATA5Q8NB90 893 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 TMEM87AQ8NBN3 555 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 MNS1Q8NEH6 495 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 FERMT2Q96AC1 680 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 VAT1LQ9HCJ6 419 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 NARFQ9UHQ1 456 aa5.19□□□□□ -1.58
SCN3A-204ENST00000440431 IQSEC3Q9UPP2 1182 aaPredicted RBP5.19□□□□□ -1.58
SCN3A-204ENST00000440431 MYO3BQ8WXR4 1341 aa5.18□□□□□ -1.58
SCN3A-204ENST00000440431 TRIM75PA6NK02 468 aa5.18□□□□□ -1.58
SCN3A-204ENST00000440431 KIF2AO00139 706 aaPredicted RBP5.18□□□□□ -1.58
SCN3A-204ENST00000440431 MCM4P33991 863 aa5.18□□□□□ -1.58
SCN3A-204ENST00000440431 CNNM3Q8NE01 707 aa5.18□□□□□ -1.58
SCN3A-204ENST00000440431 DSCC1Q9BVC3 393 aa5.18□□□□□ -1.58
SCN3A-204ENST00000440431 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.18□□□□□ -1.58
SCN3A-204ENST00000440431 CHD4Q14839 1912 aa5.18□□□□□ -1.58
SCN3A-204ENST00000440431 SGSM2O43147 1006 aa5.18□□□□□ -1.58
SCN3A-204ENST00000440431 PTH1RQ03431 593 aa5.18□□□□□ -1.58
SCN3A-204ENST00000440431 NOM1Q5C9Z4 860 aaKnown RBP5.18□□□□□ -1.58
SCN3A-204ENST00000440431 CCDC183Q5T5S1 534 aa5.18□□□□□ -1.58
SCN3A-204ENST00000440431 TBC1D9BQ66K14 1250 aa5.18□□□□□ -1.58
SCN3A-204ENST00000440431 IQCEQ6IPM2 695 aa5.18□□□□□ -1.58
SCN3A-204ENST00000440431 PIBF1Q8WXW3 757 aa5.18□□□□□ -1.58
SCN3A-204ENST00000440431 DCPSQ96C86 337 aaKnown RBP5.18□□□□□ -1.58
SCN3A-204ENST00000440431 DBNDD2Q9BQY9 259 aa5.18□□□□□ -1.58
SCN3A-204ENST00000440431 GOPCQ9HD26 462 aa5.18□□□□□ -1.58
SCN3A-204ENST00000440431 RPAP1Q9BWH6 1393 aaPredicted RBP5.18□□□□□ -1.58
SCN3A-204ENST00000440431 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.18□□□□□ -1.58
SCN3A-204ENST00000440431 A0A0G2JLW4 131 aa5.18□□□□□ -1.58
SCN3A-204ENST00000440431 RGL2O15211 777 aa5.18□□□□□ -1.58
SCN3A-204ENST00000440431 ADORA1P30542 326 aa5.18□□□□□ -1.58
SCN3A-204ENST00000440431 TIMM10P62072 90 aa5.18□□□□□ -1.58
SCN3A-204ENST00000440431 CCT2P78371 535 aaKnown RBP5.18□□□□□ -1.58
SCN3A-204ENST00000440431 ST3GAL1Q11201 340 aa5.18□□□□□ -1.58
SCN3A-204ENST00000440431 KRT79Q5XKE5 535 aa5.18□□□□□ -1.58
SCN3A-204ENST00000440431 CREB3L3Q68CJ9 461 aa5.18□□□□□ -1.58
SCN3A-204ENST00000440431 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.18□□□□□ -1.58
SCN3A-204ENST00000440431 SULF1Q8IWU6 871 aa5.18□□□□□ -1.58
SCN3A-204ENST00000440431 RASEFQ8IZ41 740 aa5.18□□□□□ -1.58
SCN3A-204ENST00000440431 CCAR2Q8N163 923 aaKnown RBP5.18□□□□□ -1.58
SCN3A-204ENST00000440431 MASTLQ96GX5 879 aa5.18□□□□□ -1.58
SCN3A-204ENST00000440431 TM6SF1Q9BZW5 370 aa5.18□□□□□ -1.58
SCN3A-204ENST00000440431 ATP8A2Q9NTI2 1148 aa5.18□□□□□ -1.58
SCN3A-204ENST00000440431 SAMM50Q9Y512 469 aa5.18□□□□□ -1.58
SCN3A-204ENST00000440431 SNED1Q8TER0 1413 aa5.18□□□□□ -1.58
SCN3A-204ENST00000440431 DDX60LQ5H9U9 1706 aaKnown RBP5.18□□□□□ -1.58
SCN3A-204ENST00000440431 DLEC1Q9Y238 1755 aa5.18□□□□□ -1.58
SCN3A-204ENST00000440431 SNAP23O00161 211 aa5.17□□□□□ -1.58
SCN3A-204ENST00000440431 PDE8BO95263 885 aa5.17□□□□□ -1.58
SCN3A-204ENST00000440431 GJB2P29033 226 aa5.17□□□□□ -1.58
SCN3A-204ENST00000440431 KIF22Q14807 665 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms