RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 ZNF569Q5MCW4 686 aa7.16□□□□□ -1.26
BDNF-211ENST00000439476 ADALQ6DHV7 355 aa7.16□□□□□ -1.26
BDNF-211ENST00000439476 NAP1L4Q99733 375 aaKnown RBP7.16□□□□□ -1.26
BDNF-211ENST00000439476 RHOXF2Q9BQY4 288 aa7.16□□□□□ -1.26
BDNF-211ENST00000439476 CHCHD3Q9NX63 227 aaKnown RBP7.16□□□□□ -1.26
BDNF-211ENST00000439476 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.16□□□□□ -1.26
BDNF-211ENST00000439476 LRRC7Q96NW7 1537 aa7.16□□□□□ -1.26
BDNF-211ENST00000439476 COQ9O75208 318 aa7.15□□□□□ -1.26
BDNF-211ENST00000439476 C16orf87Q6PH81 154 aa7.15□□□□□ -1.26
BDNF-211ENST00000439476 LDHAL6AQ6ZMR3 332 aa7.15□□□□□ -1.26
BDNF-211ENST00000439476 ZSCAN29Q8IWY8 852 aaPredicted RBP7.15□□□□□ -1.26
BDNF-211ENST00000439476 KBTBD3Q8NAB2 608 aa7.15□□□□□ -1.26
BDNF-211ENST00000439476 SREK1Q8WXA9 508 aaKnown RBP7.15□□□□□ -1.26
BDNF-211ENST00000439476 ESR2Q92731 530 aa7.15□□□□□ -1.26
BDNF-211ENST00000439476 A0A087WWV3 80 aa7.15□□□□□ -1.26
BDNF-211ENST00000439476 BICDL2A1A5D9 508 aa7.15□□□□□ -1.26
BDNF-211ENST00000439476 KRT86O43790 486 aa7.15□□□□□ -1.26
BDNF-211ENST00000439476 AKR1B10O60218 316 aa7.15□□□□□ -1.26
BDNF-211ENST00000439476 OATP04181 439 aa7.15□□□□□ -1.26
BDNF-211ENST00000439476 STX17P56962 302 aa7.15□□□□□ -1.26
BDNF-211ENST00000439476 HLTFQ14527 1009 aaKnown RBP eCLIP7.15□□□□□ -1.26
BDNF-211ENST00000439476 CEP128Q6ZU80 1094 aa7.15□□□□□ -1.26
BDNF-211ENST00000439476 CRACR2BQ8N4Y2 399 aaPredicted RBP7.15□□□□□ -1.26
BDNF-211ENST00000439476 ZNF232Q9UNY5 417 aa7.15□□□□□ -1.26
BDNF-211ENST00000439476 QRICH2Q9H0J4 1663 aa7.15□□□□□ -1.27
BDNF-211ENST00000439476 RTL9Q8NET4 1388 aa7.15□□□□□ -1.27
BDNF-211ENST00000439476 KCNQ3O43525 872 aa7.15□□□□□ -1.27
BDNF-211ENST00000439476 RANBP6O60518 1105 aaKnown RBP7.15□□□□□ -1.27
BDNF-211ENST00000439476 ATP5JP18859 108 aa7.15□□□□□ -1.27
BDNF-211ENST00000439476 RXRAP19793 462 aa7.15□□□□□ -1.27
BDNF-211ENST00000439476 OAS2P29728 719 aaKnown RBP7.15□□□□□ -1.27
BDNF-211ENST00000439476 NECTIN1Q15223 517 aa7.15□□□□□ -1.27
BDNF-211ENST00000439476 HDXQ7Z353 690 aa7.15□□□□□ -1.27
BDNF-211ENST00000439476 CADPS2Q86UW7 1296 aa7.15□□□□□ -1.27
BDNF-211ENST00000439476 SPATA24Q86W54 205 aa7.15□□□□□ -1.27
BDNF-211ENST00000439476 NUTM2AQ8IVF1 878 aaPredicted RBP7.15□□□□□ -1.27
BDNF-211ENST00000439476 ETAA1Q9NY74 926 aa7.15□□□□□ -1.27
BDNF-211ENST00000439476 PFKFB2O60825 505 aa7.15□□□□□ -1.27
BDNF-211ENST00000439476 TRIM14Q14142 442 aa7.15□□□□□ -1.27
BDNF-211ENST00000439476 NAA30Q147X3 362 aaPredicted RBP7.15□□□□□ -1.27
BDNF-211ENST00000439476 KIAA0753Q2KHM9 967 aa7.15□□□□□ -1.27
BDNF-211ENST00000439476 CROCCP2Q86T23 111 aa7.15□□□□□ -1.27
BDNF-211ENST00000439476 IP6K1Q92551 441 aa7.15□□□□□ -1.27
BDNF-211ENST00000439476 TBC1D5Q92609 795 aa7.15□□□□□ -1.27
BDNF-211ENST00000439476 SEC62Q99442 399 aaKnown RBP7.15□□□□□ -1.27
BDNF-211ENST00000439476 CRNKL1Q9BZJ0 848 aaKnown RBP7.15□□□□□ -1.27
BDNF-211ENST00000439476 KAT14Q9H8E8 782 aa7.15□□□□□ -1.27
BDNF-211ENST00000439476 EXOC1Q9NV70 894 aa7.15□□□□□ -1.27
BDNF-211ENST00000439476 RNF17Q9BXT8 1623 aaKnown RBP7.14□□□□□ -1.27
BDNF-211ENST00000439476 PSDA5PKW4 1024 aaPredicted RBP7.14□□□□□ -1.27
BDNF-211ENST00000439476 AKR1B15C9JRZ8 316 aaPredicted RBP7.14□□□□□ -1.27
BDNF-211ENST00000439476 TAF5LO75529 589 aa7.14□□□□□ -1.27
BDNF-211ENST00000439476 ACTN2P35609 894 aa7.14□□□□□ -1.27
BDNF-211ENST00000439476 DHX58Q96C10 678 aa7.14□□□□□ -1.27
BDNF-211ENST00000439476 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.14□□□□□ -1.27
BDNF-211ENST00000439476 TRMT112Q9UI30 125 aaKnown RBP7.14□□□□□ -1.27
BDNF-211ENST00000439476 PCDHA7Q9UN72 937 aa7.14□□□□□ -1.27
BDNF-211ENST00000439476 IQSEC3Q9UPP2 1182 aaPredicted RBP7.14□□□□□ -1.27
BDNF-211ENST00000439476 SMAPO00193 183 aa7.14□□□□□ -1.27
BDNF-211ENST00000439476 ZPR1O75312 459 aa7.14□□□□□ -1.27
BDNF-211ENST00000439476 CHMP4BP1P59074 171 aa7.14□□□□□ -1.27
BDNF-211ENST00000439476 POLA2Q14181 598 aa7.14□□□□□ -1.27
BDNF-211ENST00000439476 ARID5BQ14865 1188 aa7.14□□□□□ -1.27
BDNF-211ENST00000439476 WTAPQ15007 396 aa7.14□□□□□ -1.27
BDNF-211ENST00000439476 SLC9C2Q5TAH2 1124 aa7.14□□□□□ -1.27
BDNF-211ENST00000439476 MYLK4Q86YV6 388 aaPredicted RBP7.14□□□□□ -1.27
BDNF-211ENST00000439476 NFATC2IPQ8NCF5 419 aa7.14□□□□□ -1.27
BDNF-211ENST00000439476 LRRC45Q96CN5 670 aa7.14□□□□□ -1.27
BDNF-211ENST00000439476 JADE2Q9NQC1 790 aa7.14□□□□□ -1.27
BDNF-211ENST00000439476 DDX41Q9UJV9 622 aaKnown RBP7.14□□□□□ -1.27
BDNF-211ENST00000439476 KCNH3Q9ULD8 1083 aa7.14□□□□□ -1.27
BDNF-211ENST00000439476 E7EWF7 191 aa7.14□□□□□ -1.27
BDNF-211ENST00000439476 SCRN1Q12765 414 aa7.14□□□□□ -1.27
BDNF-211ENST00000439476 MTX1Q13505 466 aa7.14□□□□□ -1.27
BDNF-211ENST00000439476 MYSM1Q5VVJ2 828 aa7.14□□□□□ -1.27
BDNF-211ENST00000439476 RRAGBQ5VZM2 374 aa7.14□□□□□ -1.27
BDNF-211ENST00000439476 TRIM47Q96LD4 638 aa7.14□□□□□ -1.27
BDNF-211ENST00000439476 KCNF1Q9H3M0 494 aa7.14□□□□□ -1.27
BDNF-211ENST00000439476 REREQ9P2R6 1566 aa7.14□□□□□ -1.27
BDNF-211ENST00000439476 MRFAP1Q9Y605 127 aa7.14□□□□□ -1.27
BDNF-211ENST00000439476 GLI2P10070 1586 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 AK9Q5TCS8 1911 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 WDHD1O75717 1129 aaPredicted RBP7.13□□□□□ -1.27
BDNF-211ENST00000439476 HLA-DOAP06340 250 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 LMNB1P20700 586 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 GCKRQ14397 625 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 RTN1Q16799 776 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 TMCO4Q5TGY1 634 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 MCTP2Q6DN12 878 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 FBXO38Q6PIJ6 1188 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 CNGA4Q8IV77 575 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 PPP1R13BQ96KQ4 1090 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 MPHOSPH6Q99547 160 aaKnown RBP7.13□□□□□ -1.27
BDNF-211ENST00000439476 METTL22Q9BUU2 404 aaPredicted RBP7.13□□□□□ -1.27
BDNF-211ENST00000439476 TSGA10Q9BZW7 698 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 FTOQ9C0B1 505 aaKnown RBP eCLIP7.13□□□□□ -1.27
BDNF-211ENST00000439476 RCOR1Q9UKL0 485 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 NFE2L3Q9Y4A8 694 aa7.13□□□□□ -1.27
BDNF-211ENST00000439476 MATR3P43243 847 aaKnown RBP eCLIP7.13□□□□□ -1.27
BDNF-211ENST00000439476 NDUFA8P51970 172 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms