RNA–Protein interactions for RNA: ENST00000438888.5

PRAME-208, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 4

Gene PRAME, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-208ENST00000438888 PRRT2Q7Z6L0 340 aaPredicted RBP15.19■□□□□ 0.02
PRAME-208ENST00000438888 SHISA4Q96DD7 197 aa15.19■□□□□ 0.02
PRAME-208ENST00000438888 RAI14Q9P0K7 980 aa15.19■□□□□ 0.02
PRAME-208ENST00000438888 HMG20BQ9P0W2 317 aa15.19■□□□□ 0.02
PRAME-208ENST00000438888 BCRP11274 1271 aa15.18■□□□□ 0.02
PRAME-208ENST00000438888 HSP90AB4PQ58FF6 505 aa15.18■□□□□ 0.02
PRAME-208ENST00000438888 SMCR8Q8TEV9 937 aaPredicted RBP15.18■□□□□ 0.02
PRAME-208ENST00000438888 ZNF384Q8TF68 577 aa15.18■□□□□ 0.02
PRAME-208ENST00000438888 GABRQQ9UN88 632 aa15.18■□□□□ 0.02
PRAME-208ENST00000438888 EXOC6BQ9Y2D4 811 aa15.18■□□□□ 0.02
PRAME-208ENST00000438888 NOP58Q9Y2X3 529 aaKnown RBP15.18■□□□□ 0.02
PRAME-208ENST00000438888 AFG3L2Q9Y4W6 797 aa15.18■□□□□ 0.02
PRAME-208ENST00000438888 CEP290O15078 2479 aa15.18■□□□□ 0.02
PRAME-208ENST00000438888 CTNND1O60716 968 aaKnown RBP15.17■□□□□ 0.02
PRAME-208ENST00000438888 CCL5P13501 91 aa15.17■□□□□ 0.02
PRAME-208ENST00000438888 RHBDL3P58872 404 aa15.17■□□□□ 0.02
PRAME-208ENST00000438888 OS9Q13438 667 aaPredicted RBP15.17■□□□□ 0.02
PRAME-208ENST00000438888 SPATA5Q8NB90 893 aa15.17■□□□□ 0.02
PRAME-208ENST00000438888 FAM163AQ96GL9 167 aaPredicted RBP15.17■□□□□ 0.02
PRAME-208ENST00000438888 RNF208Q9H0X6 261 aa15.17■□□□□ 0.02
PRAME-208ENST00000438888 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.17■□□□□ 0.02
PRAME-208ENST00000438888 TAOK2Q9UL54 1235 aa15.17■□□□□ 0.02
PRAME-208ENST00000438888 COLQQ9Y215 455 aaPredicted RBP15.17■□□□□ 0.02
PRAME-208ENST00000438888 GPR75-ASB3A0A0A6YYF3 556 aa15.16■□□□□ 0.02
PRAME-208ENST00000438888 H0YGN5 161 aa15.16■□□□□ 0.02
PRAME-208ENST00000438888 RAB11FIP3O75154 756 aa15.16■□□□□ 0.02
PRAME-208ENST00000438888 UBXN2AP68543 259 aa15.16■□□□□ 0.02
PRAME-208ENST00000438888 GSTO1P78417 241 aa15.16■□□□□ 0.02
PRAME-208ENST00000438888 G3BP1Q13283 466 aaKnown RBP eCLIP15.16■□□□□ 0.02
PRAME-208ENST00000438888 DPF3Q92784 378 aa15.16■□□□□ 0.02
PRAME-208ENST00000438888 APBB1O00213 710 aa15.15■□□□□ 0.02
PRAME-208ENST00000438888 TNPO2O14787 897 aaKnown RBP15.15■□□□□ 0.02
PRAME-208ENST00000438888 ZBTB22O15209 634 aa15.15■□□□□ 0.02
PRAME-208ENST00000438888 LDHCP07864 332 aa15.15■□□□□ 0.02
PRAME-208ENST00000438888 ELNP15502 786 aa15.15■□□□□ 0.02
PRAME-208ENST00000438888 MCAMP43121 646 aa15.15■□□□□ 0.02
PRAME-208ENST00000438888 TREML2Q5T2D2 321 aa15.15■□□□□ 0.02
PRAME-208ENST00000438888 ERC1Q8IUD2 1116 aa15.15■□□□□ 0.02
PRAME-208ENST00000438888 SLAIN1Q8ND83 568 aa15.15■□□□□ 0.02
PRAME-208ENST00000438888 NSUN4Q96CB9 384 aaKnown RBP15.15■□□□□ 0.02
PRAME-208ENST00000438888 SNRKQ9NRH2 765 aa15.15■□□□□ 0.02
PRAME-208ENST00000438888 LRP2BPQ9P2M1 347 aa15.15■□□□□ 0.02
PRAME-208ENST00000438888 DOCK1Q14185 1865 aa15.14■□□□□ 0.01
PRAME-208ENST00000438888 ADCY3O60266 1144 aa15.14■□□□□ 0.01
PRAME-208ENST00000438888 ARID4AP29374 1257 aaPredicted RBP15.14■□□□□ 0.01
PRAME-208ENST00000438888 FLT3LGP49771 235 aa15.14■□□□□ 0.01
PRAME-208ENST00000438888 MAP3K10Q02779 954 aa15.14■□□□□ 0.01
PRAME-208ENST00000438888 NUCB1Q02818 461 aa15.14■□□□□ 0.01
PRAME-208ENST00000438888 ANKRD45Q5TZF3 282 aa15.14■□□□□ 0.01
PRAME-208ENST00000438888 TEX11Q8IYF3 940 aa15.14■□□□□ 0.01
PRAME-208ENST00000438888 ANKRD13CQ8N6S4 541 aa15.14■□□□□ 0.01
PRAME-208ENST00000438888 NKX2-3Q8TAU0 364 aa15.14■□□□□ 0.01
PRAME-208ENST00000438888 OSBPL5Q9H0X9 879 aaPredicted RBP15.14■□□□□ 0.01
PRAME-208ENST00000438888 UNC93B1Q9H1C4 597 aa15.14■□□□□ 0.01
PRAME-208ENST00000438888 ZBTB47Q9UFB7 747 aaPredicted RBP15.14■□□□□ 0.01
PRAME-208ENST00000438888 AGTPBP1Q9UPW5 1226 aa15.14■□□□□ 0.01
PRAME-208ENST00000438888 GJB1P08034 283 aa15.13■□□□□ 0.01
PRAME-208ENST00000438888 GJA8P48165 433 aa15.13■□□□□ 0.01
PRAME-208ENST00000438888 FXR1P51114 621 aaKnown RBP eCLIP15.13■□□□□ 0.018e-8■□□□□ 9
PRAME-208ENST00000438888 HMGCS2P54868 508 aa15.13■□□□□ 0.01
PRAME-208ENST00000438888 SPP2Q13103 211 aa15.13■□□□□ 0.01
PRAME-208ENST00000438888 TTC39AQ5SRH9 613 aa15.13■□□□□ 0.01
PRAME-208ENST00000438888 CHRDL2Q6WN34 429 aa15.13■□□□□ 0.01
PRAME-208ENST00000438888 SH3RF3Q8TEJ3 882 aaPredicted RBP15.13■□□□□ 0.01
PRAME-208ENST00000438888 KIF1BPQ96EK5 621 aa15.13■□□□□ 0.01
PRAME-208ENST00000438888 NOL10Q9BSC4 688 aaKnown RBP15.13■□□□□ 0.01
PRAME-208ENST00000438888 LRRCC1Q9C099 1032 aa15.13■□□□□ 0.01
PRAME-208ENST00000438888 SLC45A1Q9Y2W3 748 aa15.13■□□□□ 0.01
PRAME-208ENST00000438888 INHAP05111 366 aa15.12■□□□□ 0.01
PRAME-208ENST00000438888 UQCRFS1P1P0C7P4 283 aa15.12■□□□□ 0.01
PRAME-208ENST00000438888 RRP1BQ14684 758 aaKnown RBP15.12■□□□□ 0.01
PRAME-208ENST00000438888 CHD1LQ86WJ1 897 aa15.12■□□□□ 0.01
PRAME-208ENST00000438888 RHPN1Q8TCX5 695 aa15.12■□□□□ 0.01
PRAME-208ENST00000438888 U2AF1L4Q8WU68 220 aaKnown RBP15.12■□□□□ 0.01
PRAME-208ENST00000438888 AATFQ9NY61 560 aaKnown RBP eCLIP15.12■□□□□ 0.01
PRAME-208ENST00000438888 PNMA3Q9UL41 463 aa15.12■□□□□ 0.01
PRAME-208ENST00000438888 TRIOBPQ9H2D6 2365 aa15.12■□□□□ 0.01
PRAME-208ENST00000438888 TBC1D12O60347 775 aa15.11■□□□□ 0.01
PRAME-208ENST00000438888 FARP2O94887 1054 aaPredicted RBP15.11■□□□□ 0.01
PRAME-208ENST00000438888 NAA16Q6N069 864 aaPredicted RBP15.11■□□□□ 0.01
PRAME-208ENST00000438888 ZNF280CQ8ND82 737 aa15.11■□□□□ 0.01
PRAME-208ENST00000438888 DBNDD2Q9BQY9 259 aa15.11■□□□□ 0.01
PRAME-208ENST00000438888 LNPKQ9C0E8 428 aa15.11■□□□□ 0.01
PRAME-208ENST00000438888 SMARCA5O60264 1052 aaPredicted RBP15.1■□□□□ 0.01
PRAME-208ENST00000438888 NPM3O75607 178 aaKnown RBP15.1■□□□□ 0.01
PRAME-208ENST00000438888 CAP2P40123 477 aa15.1■□□□□ 0.01
PRAME-208ENST00000438888 TNNI3KQ59H18 835 aa15.1■□□□□ 0.01
PRAME-208ENST00000438888 MAPKAPK5Q8IW41 473 aa15.1■□□□□ 0.01
PRAME-208ENST00000438888 PROCA1Q8NCQ7 364 aaPredicted RBP15.1■□□□□ 0.01
PRAME-208ENST00000438888 COA7Q96BR5 231 aa15.1■□□□□ 0.01
PRAME-208ENST00000438888 DEFB118Q96PH6 123 aa15.1■□□□□ 0.01
PRAME-208ENST00000438888 FPGT-TNNI3KV9GXZ4 949 aa15.1■□□□□ 0.01
PRAME-208ENST00000438888 PHIPQ8WWQ0 1821 aa15.1■□□□□ 0.01
PRAME-208ENST00000438888 PTPRFP10586 1907 aa15.09■□□□□ 0.01
PRAME-208ENST00000438888 COL2A1P02458 1487 aaPredicted RBP15.09■□□□□ 0.01
PRAME-208ENST00000438888 USP17L5A8MUK1 530 aa15.09■□□□□ 0.01
PRAME-208ENST00000438888 MAP4K4O95819 1239 aaPredicted RBP15.09■□□□□ 0.01
PRAME-208ENST00000438888 FAM110CQ1W6H9 321 aa15.09■□□□□ 0.01
PRAME-208ENST00000438888 CCDC158Q5M9N0 1113 aa15.09■□□□□ 0.01
PRAME-208ENST00000438888 TGFBRAP1Q8WUH2 860 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms