RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 KIAA0319Q5VV43 1072 aa5.08□□□□□ -1.6
HMGB1P12-201ENST00000438594 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.08□□□□□ -1.6
HMGB1P12-201ENST00000438594 BHLHE22Q8NFJ8 381 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P12-201ENST00000438594 ASB11Q8WXH4 323 aa5.08□□□□□ -1.6
HMGB1P12-201ENST00000438594 UBXN4Q92575 508 aa5.08□□□□□ -1.6
HMGB1P12-201ENST00000438594 MKNK2Q9HBH9 465 aa5.08□□□□□ -1.6
HMGB1P12-201ENST00000438594 GPN3Q9UHW5 284 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P12-201ENST00000438594 SYNGAP1Q96PV0 1343 aa5.07□□□□□ -1.6
HMGB1P12-201ENST00000438594 GSTP1P09211 210 aaKnown RBP5.07□□□□□ -1.6
HMGB1P12-201ENST00000438594 ZNF16P17020 682 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P12-201ENST00000438594 ITPKAP23677 461 aa5.07□□□□□ -1.6
HMGB1P12-201ENST00000438594 AFMP43652 599 aa5.07□□□□□ -1.6
HMGB1P12-201ENST00000438594 GIMAP6Q6P9H5 292 aa5.07□□□□□ -1.6
HMGB1P12-201ENST00000438594 PRR23BQ6ZRT6 265 aa5.07□□□□□ -1.6
HMGB1P12-201ENST00000438594 ZNF662Q6ZS27 426 aa5.07□□□□□ -1.6
HMGB1P12-201ENST00000438594 EXOC8Q8IYI6 725 aa5.07□□□□□ -1.6
HMGB1P12-201ENST00000438594 GNEQ9Y223 722 aaKnown RBP5.07□□□□□ -1.6
HMGB1P12-201ENST00000438594 B8ZZF3 427 aa5.06□□□□□ -1.6
HMGB1P12-201ENST00000438594 NFIBO00712 420 aa5.06□□□□□ -1.6
HMGB1P12-201ENST00000438594 CPNE3O75131 537 aaKnown RBP5.06□□□□□ -1.6
HMGB1P12-201ENST00000438594 TSPAN15O95858 294 aa5.06□□□□□ -1.6
HMGB1P12-201ENST00000438594 ORC1Q13415 861 aa5.06□□□□□ -1.6
HMGB1P12-201ENST00000438594 ECM1Q16610 540 aa5.06□□□□□ -1.6
HMGB1P12-201ENST00000438594 KIF4BQ2VIQ3 1234 aa5.06□□□□□ -1.6
HMGB1P12-201ENST00000438594 FYB2Q5VWT5 728 aa5.06□□□□□ -1.6
HMGB1P12-201ENST00000438594 DNAJC14Q6Y2X3 702 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P12-201ENST00000438594 LCNL1Q6ZST4 164 aa5.06□□□□□ -1.6
HMGB1P12-201ENST00000438594 ISL2Q96A47 359 aa5.06□□□□□ -1.6
HMGB1P12-201ENST00000438594 PICK1Q9NRD5 415 aa5.06□□□□□ -1.6
HMGB1P12-201ENST00000438594 LMCD1Q9NZU5 365 aa5.06□□□□□ -1.6
HMGB1P12-201ENST00000438594 SNX11Q9Y5W9 270 aa5.06□□□□□ -1.6
HMGB1P12-201ENST00000438594 PRRG2O14669 202 aa5.05□□□□□ -1.6
HMGB1P12-201ENST00000438594 NEFMP07197 916 aa5.05□□□□□ -1.6
HMGB1P12-201ENST00000438594 FGD1P98174 961 aa5.05□□□□□ -1.6
HMGB1P12-201ENST00000438594 FAAP100Q0VG06 881 aa5.05□□□□□ -1.6
HMGB1P12-201ENST00000438594 TMEM67Q5HYA8 995 aa5.05□□□□□ -1.6
HMGB1P12-201ENST00000438594 TEX2Q8IWB9 1127 aa5.05□□□□□ -1.6
HMGB1P12-201ENST00000438594 KIRREL1Q96J84 757 aa5.05□□□□□ -1.6
HMGB1P12-201ENST00000438594 DIRC2Q96SL1 478 aa5.05□□□□□ -1.6
HMGB1P12-201ENST00000438594 ABCB6Q9NP58 842 aa5.05□□□□□ -1.6
HMGB1P12-201ENST00000438594 GTF2IRD1Q9UHL9 959 aa5.05□□□□□ -1.6
HMGB1P12-201ENST00000438594 CTNND2Q9UQB3 1225 aa5.05□□□□□ -1.6
HMGB1P12-201ENST00000438594 SUGT1Q9Y2Z0 365 aa5.05□□□□□ -1.6
HMGB1P12-201ENST00000438594 NCANO14594 1321 aa5.04□□□□□ -1.6
HMGB1P12-201ENST00000438594 TMEM238LA0A1B0GVL6 79 aa5.04□□□□□ -1.6
HMGB1P12-201ENST00000438594 GNAT3A8MTJ3 354 aa5.04□□□□□ -1.6
HMGB1P12-201ENST00000438594 GLI1P08151 1106 aa5.04□□□□□ -1.6
HMGB1P12-201ENST00000438594 C1QTNF9P0C862 333 aa5.04□□□□□ -1.6
HMGB1P12-201ENST00000438594 ZC3H6P61129 1189 aaKnown RBP5.04□□□□□ -1.6
HMGB1P12-201ENST00000438594 PTPN12Q05209 780 aaKnown RBP5.04□□□□□ -1.6
HMGB1P12-201ENST00000438594 PPP2R3AQ06190 1150 aa5.04□□□□□ -1.6
HMGB1P12-201ENST00000438594 DTHD1Q6ZMT9 781 aa5.04□□□□□ -1.6
HMGB1P12-201ENST00000438594 CYFIP1Q7L576 1253 aa5.04□□□□□ -1.6
HMGB1P12-201ENST00000438594 C1QL4Q86Z23 238 aa5.04□□□□□ -1.6
HMGB1P12-201ENST00000438594 MICAL1Q8TDZ2 1067 aa5.04□□□□□ -1.6
HMGB1P12-201ENST00000438594 ACSBG1Q96GR2 724 aa5.04□□□□□ -1.6
HMGB1P12-201ENST00000438594 HEXIM2Q96MH2 286 aaKnown RBP5.04□□□□□ -1.6
HMGB1P12-201ENST00000438594 TNKS2Q9H2K2 1166 aa5.04□□□□□ -1.6
HMGB1P12-201ENST00000438594 KRT82Q9NSB4 513 aa5.04□□□□□ -1.6
HMGB1P12-201ENST00000438594 PPP1R1BQ9UD71 204 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P12-201ENST00000438594 A0A0U1RQG5 324 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P12-201ENST00000438594 TMEM88BA6NKF7 163 aa5.03□□□□□ -1.6
HMGB1P12-201ENST00000438594 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P12-201ENST00000438594 ZNF326Q5BKZ1 582 aaKnown RBP5.03□□□□□ -1.6
HMGB1P12-201ENST00000438594 RPS26P11Q5JNZ5 115 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P12-201ENST00000438594 CILP2Q8IUL8 1156 aa5.03□□□□□ -1.6
HMGB1P12-201ENST00000438594 TMC1Q8TDI8 760 aa5.03□□□□□ -1.6
HMGB1P12-201ENST00000438594 KRTAP4-5Q9BYR2 181 aa5.03□□□□□ -1.6
HMGB1P12-201ENST00000438594 NSUN3Q9H649 340 aaKnown RBP5.03□□□□□ -1.6
HMGB1P12-201ENST00000438594 CARS2Q9HA77 564 aaKnown RBP5.03□□□□□ -1.6
HMGB1P12-201ENST00000438594 SLC52A1Q9NWF4 448 aa5.03□□□□□ -1.6
HMGB1P12-201ENST00000438594 TRAK1Q9UPV9 953 aa5.03□□□□□ -1.6
HMGB1P12-201ENST00000438594 PCDHGC5Q9Y5F6 944 aa5.03□□□□□ -1.6
HMGB1P12-201ENST00000438594 CSADQ9Y600 493 aa5.03□□□□□ -1.6
HMGB1P12-201ENST00000438594 NPIPB6E9PJ23 425 aa5.02□□□□□ -1.61
HMGB1P12-201ENST00000438594 H3BRB1 525 aa5.02□□□□□ -1.61
HMGB1P12-201ENST00000438594 TPD52L2O43399 206 aaKnown RBP5.02□□□□□ -1.61
HMGB1P12-201ENST00000438594 NDUFB5O43674 189 aa5.02□□□□□ -1.61
HMGB1P12-201ENST00000438594 RAB11FIP3O75154 756 aa5.02□□□□□ -1.61
HMGB1P12-201ENST00000438594 ERCC3P19447 782 aa5.02□□□□□ -1.61
HMGB1P12-201ENST00000438594 BUD31P41223 144 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P12-201ENST00000438594 FCGRTP55899 365 aa5.02□□□□□ -1.61
HMGB1P12-201ENST00000438594 NAALADL2Q58DX5 795 aa5.02□□□□□ -1.61
HMGB1P12-201ENST00000438594 MAP1SQ66K74 1059 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P12-201ENST00000438594 SPACA3Q8IXA5 215 aa5.02□□□□□ -1.61
HMGB1P12-201ENST00000438594 CCDC74AQ96AQ1 378 aa5.02□□□□□ -1.61
HMGB1P12-201ENST00000438594 CCDC136Q96JN2 1154 aa5.02□□□□□ -1.61
HMGB1P12-201ENST00000438594 TUT1Q9H6E5 874 aaKnown RBP5.02□□□□□ -1.61
HMGB1P12-201ENST00000438594 MYH16Q9H6N6 1097 aa5.02□□□□□ -1.61
HMGB1P12-201ENST00000438594 CBX8Q9HC52 389 aa5.02□□□□□ -1.61
HMGB1P12-201ENST00000438594 PRDM10Q9NQV6 1147 aa5.02□□□□□ -1.61
HMGB1P12-201ENST00000438594 TMEM253P0C7T8 217 aa5.01□□□□□ -1.61
HMGB1P12-201ENST00000438594 PDE3BQ13370 1112 aa5.01□□□□□ -1.61
HMGB1P12-201ENST00000438594 SF3A1Q15459 793 aaKnown RBP5.01□□□□□ -1.61
HMGB1P12-201ENST00000438594 PPM1JQ5JR12 505 aa5.01□□□□□ -1.61
HMGB1P12-201ENST00000438594 PRPF40BQ6NWY9 871 aaKnown RBP5.01□□□□□ -1.61
HMGB1P12-201ENST00000438594 SIAH1Q8IUQ4 282 aa5.01□□□□□ -1.61
HMGB1P12-201ENST00000438594 GLYCTKQ8IVS8 523 aa5.01□□□□□ -1.61
HMGB1P12-201ENST00000438594 SULF2Q8IWU5 870 aa5.01□□□□□ -1.61
HMGB1P12-201ENST00000438594 FBXO15Q8NCQ5 510 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms