RNA–Protein interactions for RNA: ENST00000437366.2

NEFM-203, Transcript of neurofilament medium, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEFM, Length 3,148 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-203ENST00000437366 SERPINC1P01008 464 aa13.23□□□□□ -0.29
NEFM-203ENST00000437366 MECOMQ03112 1051 aa13.23□□□□□ -0.29
NEFM-203ENST00000437366 GRIN1Q05586 938 aa13.23□□□□□ -0.29
NEFM-203ENST00000437366 ALX1Q15699 326 aa13.23□□□□□ -0.29
NEFM-203ENST00000437366 AXDND1Q5T1B0 1012 aaPredicted RBP13.23□□□□□ -0.29
NEFM-203ENST00000437366 SHC4Q6S5L8 630 aa13.23□□□□□ -0.29
NEFM-203ENST00000437366 CLEC4GQ6UXB4 293 aa13.23□□□□□ -0.29
NEFM-203ENST00000437366 TMC6Q7Z403 805 aa13.23□□□□□ -0.29
NEFM-203ENST00000437366 FOXN1O15353 648 aa13.22□□□□□ -0.29
NEFM-203ENST00000437366 PLEKHA8P1O95397 391 aa13.22□□□□□ -0.29
NEFM-203ENST00000437366 CAVIN2O95810 425 aa13.22□□□□□ -0.29
NEFM-203ENST00000437366 CMA1P23946 247 aa13.22□□□□□ -0.29
NEFM-203ENST00000437366 AMIGO3Q86WK7 504 aa13.22□□□□□ -0.29
NEFM-203ENST00000437366 GRAMD1CQ8IYS0 662 aa13.22□□□□□ -0.29
NEFM-203ENST00000437366 KCNH3Q9ULD8 1083 aa13.22□□□□□ -0.29
NEFM-203ENST00000437366 PCDHB6Q9Y5E3 794 aa13.22□□□□□ -0.29
NEFM-203ENST00000437366 WDR19Q8NEZ3 1342 aa13.22□□□□□ -0.29
NEFM-203ENST00000437366 FAM205CA6NFA0 338 aa13.22□□□□□ -0.29
NEFM-203ENST00000437366 POLR2DO15514 142 aaKnown RBP13.22□□□□□ -0.29
NEFM-203ENST00000437366 SKILP12757 684 aa13.22□□□□□ -0.29
NEFM-203ENST00000437366 IFNAR1P17181 557 aa13.22□□□□□ -0.29
NEFM-203ENST00000437366 USP5P45974 858 aa13.22□□□□□ -0.29
NEFM-203ENST00000437366 LONRF3Q496Y0 759 aa13.22□□□□□ -0.29
NEFM-203ENST00000437366 EP400Q96L91 3159 aa13.22□□□□□ -0.29
NEFM-203ENST00000437366 DEXIO95424 95 aa13.22□□□□□ -0.29
NEFM-203ENST00000437366 ZNF827Q17R98 1081 aa13.22□□□□□ -0.29
NEFM-203ENST00000437366 ENAHQ8N8S7 591 aaPredicted RBP13.22□□□□□ -0.29
NEFM-203ENST00000437366 ARHGEF1Q92888 912 aaKnown RBP13.22□□□□□ -0.29
NEFM-203ENST00000437366 ZSCAN10Q96SZ4 725 aaPredicted RBP13.22□□□□□ -0.29
NEFM-203ENST00000437366 LAMA4Q16363 1823 aa13.21□□□□□ -0.29
NEFM-203ENST00000437366 MMP1P03956 469 aa13.21□□□□□ -0.29
NEFM-203ENST00000437366 XBP1P17861 261 aa13.21□□□□□ -0.29
NEFM-203ENST00000437366 OLFM4Q6UX06 510 aa13.21□□□□□ -0.29
NEFM-203ENST00000437366 TMTC2Q8N394 836 aa13.21□□□□□ -0.29
NEFM-203ENST00000437366 CRACR2BQ8N4Y2 399 aaPredicted RBP13.21□□□□□ -0.29
NEFM-203ENST00000437366 KRI1Q8N9T8 703 aaKnown RBP13.21□□□□□ -0.29
NEFM-203ENST00000437366 XPO4Q9C0E2 1151 aaKnown RBP13.21□□□□□ -0.29
NEFM-203ENST00000437366 TNNT1P13805 278 aa13.21□□□□□ -0.3
NEFM-203ENST00000437366 CFAP100Q494V2 611 aa13.21□□□□□ -0.3
NEFM-203ENST00000437366 NYXQ9GZU5 481 aa13.21□□□□□ -0.3
NEFM-203ENST00000437366 PNPLA7Q6ZV29 1317 aa13.2□□□□□ -0.3
NEFM-203ENST00000437366 ATP1A3P13637 1013 aa13.2□□□□□ -0.3
NEFM-203ENST00000437366 CDK11BP21127 795 aaKnown RBP13.2□□□□□ -0.3
NEFM-203ENST00000437366 AFMP43652 599 aa13.2□□□□□ -0.3
NEFM-203ENST00000437366 DIXDC1Q155Q3 683 aa13.2□□□□□ -0.3
NEFM-203ENST00000437366 BARGINQ6ZT62 677 aa13.2□□□□□ -0.3
NEFM-203ENST00000437366 CRNKL1Q9BZJ0 848 aaKnown RBP13.2□□□□□ -0.3
NEFM-203ENST00000437366 BCL2L12Q9HB09 334 aa13.2□□□□□ -0.3
NEFM-203ENST00000437366 COL14A1Q05707 1796 aaKnown RBP13.2□□□□□ -0.3
NEFM-203ENST00000437366 ZNF804BA4D1E1 1349 aa13.2□□□□□ -0.3
NEFM-203ENST00000437366 SF3B3Q15393 1217 aaKnown RBP13.2□□□□□ -0.3
NEFM-203ENST00000437366 KLHL10Q6JEL2 608 aa13.2□□□□□ -0.3
NEFM-203ENST00000437366 CTR9Q6PD62 1173 aa13.2□□□□□ -0.3
NEFM-203ENST00000437366 RIOK1Q9BRS2 568 aaKnown RBP13.2□□□□□ -0.3
NEFM-203ENST00000437366 NUP98P52948 1817 aa13.2□□□□□ -0.3
NEFM-203ENST00000437366 NHSL1Q5SYE7 1610 aa13.2□□□□□ -0.3
NEFM-203ENST00000437366 USP17L8P0C7I0 530 aa13.19□□□□□ -0.3
NEFM-203ENST00000437366 ZNF174Q15697 407 aa13.19□□□□□ -0.3
NEFM-203ENST00000437366 FAM196AQ6ZSG2 479 aa13.19□□□□□ -0.3
NEFM-203ENST00000437366 LRRC8AQ8IWT6 810 aa13.19□□□□□ -0.3
NEFM-203ENST00000437366 CTCFLQ8NI51 663 aaPredicted RBP13.19□□□□□ -0.3
NEFM-203ENST00000437366 STAMQ92783 540 aa13.19□□□□□ -0.3
NEFM-203ENST00000437366 SAP30BPQ9UHR5 308 aaKnown RBP13.19□□□□□ -0.3
NEFM-203ENST00000437366 NLRP12P59046 1061 aa13.19□□□□□ -0.3
NEFM-203ENST00000437366 DHX58Q96C10 678 aa13.19□□□□□ -0.3
NEFM-203ENST00000437366 NSUN4Q96CB9 384 aaKnown RBP13.19□□□□□ -0.3
NEFM-203ENST00000437366 MKNK2Q9HBH9 465 aa13.19□□□□□ -0.3
NEFM-203ENST00000437366 NARFQ9UHQ1 456 aa13.19□□□□□ -0.3
NEFM-203ENST00000437366 STX8Q9UNK0 236 aa13.19□□□□□ -0.3
NEFM-203ENST00000437366 PCDHA5Q9Y5H7 936 aa13.19□□□□□ -0.3
NEFM-203ENST00000437366 DOT1LQ8TEK3 1739 aa13.19□□□□□ -0.3
NEFM-203ENST00000437366 NWD2Q9ULI1 1742 aa13.19□□□□□ -0.3
NEFM-203ENST00000437366 RIOK3O14730 519 aaKnown RBP13.19□□□□□ -0.3
NEFM-203ENST00000437366 TRAPPC3LQ5T215 181 aa13.19□□□□□ -0.3
NEFM-203ENST00000437366 USP49Q70CQ1 688 aa13.19□□□□□ -0.3
NEFM-203ENST00000437366 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.19□□□□□ -0.3
NEFM-203ENST00000437366 DYNLL2Q96FJ2 89 aa13.19□□□□□ -0.3
NEFM-203ENST00000437366 ATRNO75882 1429 aa13.19□□□□□ -0.3
NEFM-203ENST00000437366 MYO5AQ9Y4I1 1855 aaKnown RBP13.18□□□□□ -0.3
NEFM-203ENST00000437366 U2AF2P26368 475 aaKnown RBP eCLIP13.18□□□□□ -0.3
NEFM-203ENST00000437366 GOLGA8FQ08AF8 430 aa13.18□□□□□ -0.3
NEFM-203ENST00000437366 GOLGA8DPQ0D2H9 430 aa13.18□□□□□ -0.3
NEFM-203ENST00000437366 NFIXQ14938 502 aa13.18□□□□□ -0.3
NEFM-203ENST00000437366 PTPAQ15257 358 aa13.18□□□□□ -0.3
NEFM-203ENST00000437366 TRMT44Q8IYL2 757 aaKnown RBP13.18□□□□□ -0.3
NEFM-203ENST00000437366 ZNF384Q8TF68 577 aa13.18□□□□□ -0.3
NEFM-203ENST00000437366 SERTAD1Q9UHV2 236 aa13.18□□□□□ -0.3
NEFM-203ENST00000437366 USP27XA6NNY8 438 aa13.18□□□□□ -0.3
NEFM-203ENST00000437366 RRP9O43818 475 aaKnown RBP13.18□□□□□ -0.3
NEFM-203ENST00000437366 CASP1P29466 404 aa13.18□□□□□ -0.3
NEFM-203ENST00000437366 TOB1P50616 345 aaPredicted RBP13.18□□□□□ -0.3
NEFM-203ENST00000437366 NLRP5P59047 1200 aa13.18□□□□□ -0.3
NEFM-203ENST00000437366 MAP3K14Q99558 947 aa13.18□□□□□ -0.3
NEFM-203ENST00000437366 BAZ2BQ9UIF8 2168 aaKnown RBP13.18□□□□□ -0.3
NEFM-203ENST00000437366 SMTNL1A8MU46 457 aa13.17□□□□□ -0.3
NEFM-203ENST00000437366 RPS6KA4O75676 772 aa13.17□□□□□ -0.3
NEFM-203ENST00000437366 NOM1Q5C9Z4 860 aaKnown RBP13.17□□□□□ -0.3
NEFM-203ENST00000437366 CNBD1Q8NA66 436 aa13.17□□□□□ -0.3
NEFM-203ENST00000437366 RASSF8Q8NHQ8 419 aa13.17□□□□□ -0.3
NEFM-203ENST00000437366 BRMS1Q9HCU9 246 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms