RNA–Protein interactions for RNA: ENST00000436368.6

RBFOX1-205, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-205ENST00000436368 TUBB4AP04350 444 aa18.08■□□□□ 0.49
RBFOX1-205ENST00000436368 RXRAP19793 462 aa18.08■□□□□ 0.49
RBFOX1-205ENST00000436368 SPTY2D1Q68D10 685 aaPredicted RBP18.08■□□□□ 0.49
RBFOX1-205ENST00000436368 LRRC8AQ8IWT6 810 aa18.08■□□□□ 0.49
RBFOX1-205ENST00000436368 DIS3L2Q8IYB7 885 aaKnown RBP18.08■□□□□ 0.49
RBFOX1-205ENST00000436368 CRACR2BQ8N4Y2 399 aaPredicted RBP18.08■□□□□ 0.49
RBFOX1-205ENST00000436368 MIGA1Q8NAN2 632 aa18.08■□□□□ 0.49
RBFOX1-205ENST00000436368 OSBPL5Q9H0X9 879 aaPredicted RBP18.08■□□□□ 0.49
RBFOX1-205ENST00000436368 ABCF2Q9UG63 623 aa18.08■□□□□ 0.49
RBFOX1-205ENST00000436368 KCNJ6P48051 423 aa18.08■□□□□ 0.48
RBFOX1-205ENST00000436368 TPD52L1Q16890 204 aaPredicted RBP18.08■□□□□ 0.48
RBFOX1-205ENST00000436368 ERFEQ4G0M1 354 aa18.08■□□□□ 0.48
RBFOX1-205ENST00000436368 CRNKL1Q9BZJ0 848 aaKnown RBP18.08■□□□□ 0.48
RBFOX1-205ENST00000436368 KCND1Q9NSA2 647 aa18.08■□□□□ 0.48
RBFOX1-205ENST00000436368 MROH7-TTC4A0A0A0MT08 1334 aa18.07■□□□□ 0.48
RBFOX1-205ENST00000436368 TNKSO95271 1327 aa18.07■□□□□ 0.48
RBFOX1-205ENST00000436368 PRKAB2O43741 272 aa18.07■□□□□ 0.48
RBFOX1-205ENST00000436368 SMC2O95347 1197 aa18.07■□□□□ 0.48
RBFOX1-205ENST00000436368 MARCKSP29966 332 aaPredicted RBP18.07■□□□□ 0.48
RBFOX1-205ENST00000436368 MYL5Q02045 173 aa18.07■□□□□ 0.48
RBFOX1-205ENST00000436368 DPCR1Q3MIW9 517 aa18.07■□□□□ 0.48
RBFOX1-205ENST00000436368 CNNM3Q8NE01 707 aa18.07■□□□□ 0.48
RBFOX1-205ENST00000436368 NLRP3Q96P20 1036 aa18.07■□□□□ 0.48
RBFOX1-205ENST00000436368 ZSCAN10Q96SZ4 725 aaPredicted RBP18.07■□□□□ 0.48
RBFOX1-205ENST00000436368 KCNH3Q9ULD8 1083 aa18.07■□□□□ 0.48
RBFOX1-205ENST00000436368 MINDY4BA8MYZ0 360 aa18.06■□□□□ 0.48
RBFOX1-205ENST00000436368 WDHD1O75717 1129 aaPredicted RBP18.06■□□□□ 0.48
RBFOX1-205ENST00000436368 SYCP1Q15431 976 aa18.06■□□□□ 0.48
RBFOX1-205ENST00000436368 CT47A1Q5JQC4 288 aaPredicted RBP18.06■□□□□ 0.48
RBFOX1-205ENST00000436368 KRBA2Q6ZNG9 492 aa18.06■□□□□ 0.48
RBFOX1-205ENST00000436368 C17orf53Q8N3J3 647 aaPredicted RBP18.06■□□□□ 0.48
RBFOX1-205ENST00000436368 TRIML1Q8N9V2 468 aa18.06■□□□□ 0.48
RBFOX1-205ENST00000436368 CACTINQ8WUQ7 758 aaKnown RBP18.06■□□□□ 0.48
RBFOX1-205ENST00000436368 AIFM3Q96NN9 605 aa18.06■□□□□ 0.48
RBFOX1-205ENST00000436368 SETDB2Q96T68 719 aa18.06■□□□□ 0.48
RBFOX1-205ENST00000436368 PYM1Q9BRP8 204 aaKnown RBP18.06■□□□□ 0.48
RBFOX1-205ENST00000436368 MYL10Q9BUA6 226 aa18.06■□□□□ 0.48
RBFOX1-205ENST00000436368 NARFQ9UHQ1 456 aa18.06■□□□□ 0.48
RBFOX1-205ENST00000436368 LTBP4Q8N2S1 1624 aa18.05■□□□□ 0.48
RBFOX1-205ENST00000436368 SKILP12757 684 aa18.05■□□□□ 0.48
RBFOX1-205ENST00000436368 CCDC178Q5BJE1 867 aa18.05■□□□□ 0.48
RBFOX1-205ENST00000436368 IFIT1BQ5T764 474 aaKnown RBP18.05■□□□□ 0.48
RBFOX1-205ENST00000436368 SHC4Q6S5L8 630 aa18.05■□□□□ 0.48
RBFOX1-205ENST00000436368 CCDC112Q8NEF3 446 aa18.05■□□□□ 0.48
RBFOX1-205ENST00000436368 NUP133Q8WUM0 1156 aa18.05■□□□□ 0.48
RBFOX1-205ENST00000436368 RIOK1Q9BRS2 568 aaKnown RBP18.05■□□□□ 0.48
RBFOX1-205ENST00000436368 SENP2Q9HC62 589 aa18.05■□□□□ 0.48
RBFOX1-205ENST00000436368 ATP8A2Q9NTI2 1148 aa18.05■□□□□ 0.48
RBFOX1-205ENST00000436368 GJB4Q9NTQ9 266 aa18.05■□□□□ 0.48
RBFOX1-205ENST00000436368 ARPP21Q9UBL0 812 aaPredicted RBP18.05■□□□□ 0.48
RBFOX1-205ENST00000436368 NRBP1Q9UHY1 535 aa18.05■□□□□ 0.48
RBFOX1-205ENST00000436368 MINPP1Q9UNW1 487 aa18.05■□□□□ 0.48
RBFOX1-205ENST00000436368 NUTM2BA6NNL0 878 aaPredicted RBP18.04■□□□□ 0.48
RBFOX1-205ENST00000436368 NUTM2EB1AL46 878 aaPredicted RBP18.04■□□□□ 0.48
RBFOX1-205ENST00000436368 ORC4O43929 436 aa18.04■□□□□ 0.48
RBFOX1-205ENST00000436368 TOM1O60784 492 aa18.04■□□□□ 0.48
RBFOX1-205ENST00000436368 ZPR1O75312 459 aa18.04■□□□□ 0.48
RBFOX1-205ENST00000436368 SFPQP23246 707 aaKnown RBP eCLIP18.04■□□□□ 0.48
RBFOX1-205ENST00000436368 PTPREP23469 700 aa18.04■□□□□ 0.48
RBFOX1-205ENST00000436368 KRT2P35908 639 aa18.04■□□□□ 0.48
RBFOX1-205ENST00000436368 GYG1P46976 350 aa18.04■□□□□ 0.48
RBFOX1-205ENST00000436368 VPS72Q15906 364 aa18.04■□□□□ 0.48
RBFOX1-205ENST00000436368 FBXO33Q7Z6M2 555 aa18.04■□□□□ 0.48
RBFOX1-205ENST00000436368 CERS3Q8IU89 383 aa18.04■□□□□ 0.48
RBFOX1-205ENST00000436368 NUTM2AQ8IVF1 878 aaPredicted RBP18.04■□□□□ 0.48
RBFOX1-205ENST00000436368 LINC00116Q8NCU8 138 aa18.04■□□□□ 0.48
RBFOX1-205ENST00000436368 CHD4Q14839 1912 aa18.04■□□□□ 0.48
RBFOX1-205ENST00000436368 DUOX1Q9NRD9 1551 aa18.04■□□□□ 0.48
RBFOX1-205ENST00000436368 PRPF3O43395 683 aaKnown RBP18.03■□□□□ 0.48
RBFOX1-205ENST00000436368 RPS6KA4O75676 772 aa18.03■□□□□ 0.48
RBFOX1-205ENST00000436368 FGRP09769 529 aa18.03■□□□□ 0.48
RBFOX1-205ENST00000436368 TNNT1P13805 278 aa18.03■□□□□ 0.48
RBFOX1-205ENST00000436368 RPS8P62241 208 aaKnown RBP18.03■□□□□ 0.48
RBFOX1-205ENST00000436368 LRMPQ12912 555 aa18.03■□□□□ 0.48
RBFOX1-205ENST00000436368 SEC23AQ15436 765 aa18.03■□□□□ 0.48
RBFOX1-205ENST00000436368 TPTE2Q6XPS3 522 aa18.03■□□□□ 0.48
RBFOX1-205ENST00000436368 FILIP1Q7Z7B0 1213 aa18.03■□□□□ 0.48
RBFOX1-205ENST00000436368 NBPF11Q86T75 865 aa18.03■□□□□ 0.48
RBFOX1-205ENST00000436368 NBPF5PQ86XG9 351 aaPredicted RBP18.03■□□□□ 0.48
RBFOX1-205ENST00000436368 AMOTL1Q8IY63 956 aa18.03■□□□□ 0.48
RBFOX1-205ENST00000436368 MAST2Q6P0Q8 1798 aa18.03■□□□□ 0.48
RBFOX1-205ENST00000436368 TRIM75PA6NK02 468 aa18.03■□□□□ 0.48
RBFOX1-205ENST00000436368 SNAP23O00161 211 aa18.03■□□□□ 0.48
RBFOX1-205ENST00000436368 HIBADHP31937 336 aaKnown RBP18.03■□□□□ 0.48
RBFOX1-205ENST00000436368 PDE4BQ07343 736 aa18.03■□□□□ 0.48
RBFOX1-205ENST00000436368 CCDC144BQ3MJ40 725 aa18.03■□□□□ 0.48
RBFOX1-205ENST00000436368 MLKLQ8NB16 471 aa18.03■□□□□ 0.48
RBFOX1-205ENST00000436368 CTCFLQ8NI51 663 aaPredicted RBP18.03■□□□□ 0.48
RBFOX1-205ENST00000436368 FERMT2Q96AC1 680 aa18.03■□□□□ 0.48
RBFOX1-205ENST00000436368 SRPRBQ9Y5M8 271 aaKnown RBP18.03■□□□□ 0.48
RBFOX1-205ENST00000436368 BTBD18B2RXH4 712 aa18.02■□□□□ 0.47
RBFOX1-205ENST00000436368 GSTO1P78417 241 aa18.02■□□□□ 0.47
RBFOX1-205ENST00000436368 FAM84BQ96KN1 310 aaPredicted RBP18.02■□□□□ 0.47
RBFOX1-205ENST00000436368 ZKSCAN3Q9BRR0 538 aa18.02■□□□□ 0.47
RBFOX1-205ENST00000436368 IFNKQ9P0W0 207 aa18.02■□□□□ 0.47
RBFOX1-205ENST00000436368 BIN1O00499 593 aa18.01■□□□□ 0.47
RBFOX1-205ENST00000436368 KIF5BP33176 963 aa18.01■□□□□ 0.47
RBFOX1-205ENST00000436368 PTPN14Q15678 1187 aa18.01■□□□□ 0.47
RBFOX1-205ENST00000436368 SBK1Q52WX2 424 aa18.01■□□□□ 0.47
RBFOX1-205ENST00000436368 CEP135Q66GS9 1140 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms