RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 RLFQ13129 1914 aa13.11□□□□□ -0.31
CPNE1-214ENST00000435747 DOCK2Q92608 1830 aa13.11□□□□□ -0.31
CPNE1-214ENST00000435747 FRAT2O75474 233 aaPredicted RBP13.11□□□□□ -0.31
CPNE1-214ENST00000435747 DNAJB2P25686 324 aa13.11□□□□□ -0.31
CPNE1-214ENST00000435747 UBE4AQ14139 1066 aa13.11□□□□□ -0.31
CPNE1-214ENST00000435747 TAF7LQ5H9L4 462 aa13.11□□□□□ -0.31
CPNE1-214ENST00000435747 TMEM31Q5JXX7 168 aa13.11□□□□□ -0.31
CPNE1-214ENST00000435747 TREML2Q5T2D2 321 aa13.11□□□□□ -0.31
CPNE1-214ENST00000435747 VPS37DQ86XT2 251 aa13.11□□□□□ -0.31
CPNE1-214ENST00000435747 LINS1Q8NG48 757 aa13.11□□□□□ -0.31
CPNE1-214ENST00000435747 IQSEC3Q9UPP2 1182 aaPredicted RBP13.11□□□□□ -0.31
CPNE1-214ENST00000435747 FKBP5Q13451 457 aaPredicted RBP13.1□□□□□ -0.31
CPNE1-214ENST00000435747 BEND3Q5T5X7 828 aa13.1□□□□□ -0.31
CPNE1-214ENST00000435747 HHIPL2Q6UWX4 724 aa13.1□□□□□ -0.31
CPNE1-214ENST00000435747 LDHAL6AQ6ZMR3 332 aa13.1□□□□□ -0.31
CPNE1-214ENST00000435747 MYH16Q9H6N6 1097 aa13.1□□□□□ -0.31
CPNE1-214ENST00000435747 LRRFIP2Q9Y608 721 aaKnown RBP13.1□□□□□ -0.31
CPNE1-214ENST00000435747 PHF20L1A8MW92 1017 aa13.09□□□□□ -0.31
CPNE1-214ENST00000435747 PABPC4Q13310 644 aaKnown RBP eCLIP13.09□□□□□ -0.31
CPNE1-214ENST00000435747 CCDC85BQ15834 202 aaPredicted RBP13.09□□□□□ -0.31
CPNE1-214ENST00000435747 TIFAQ96CG3 184 aa13.09□□□□□ -0.31
CPNE1-214ENST00000435747 P2RX7Q99572 595 aaKnown RBP13.09□□□□□ -0.31
CPNE1-214ENST00000435747 EPHX3Q9H6B9 360 aa13.09□□□□□ -0.31
CPNE1-214ENST00000435747 XIRP2A4UGR9 3374 aa13.08□□□□□ -0.32
CPNE1-214ENST00000435747 LOC285556D6RIA3 1793 aa13.08□□□□□ -0.32
CPNE1-214ENST00000435747 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.08□□□□□ -0.32
CPNE1-214ENST00000435747 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.08□□□□□ -0.32
CPNE1-214ENST00000435747 F6X3S4 739 aa13.08□□□□□ -0.32
CPNE1-214ENST00000435747 DNM1LO00429 736 aa13.08□□□□□ -0.32
CPNE1-214ENST00000435747 NFIAQ12857 509 aa13.08□□□□□ -0.32
CPNE1-214ENST00000435747 PROCA1Q8NCQ7 364 aaPredicted RBP13.08□□□□□ -0.32
CPNE1-214ENST00000435747 ZNF594Q96JF6 807 aaPredicted RBP13.08□□□□□ -0.32
CPNE1-214ENST00000435747 TSPYL2Q9H2G4 693 aaPredicted RBP13.08□□□□□ -0.32
CPNE1-214ENST00000435747 SUGT1Q9Y2Z0 365 aa13.08□□□□□ -0.32
CPNE1-214ENST00000435747 CHD9Q3L8U1 2897 aa13.07□□□□□ -0.32
CPNE1-214ENST00000435747 RGS2P41220 211 aa13.07□□□□□ -0.32
CPNE1-214ENST00000435747 MRE11P49959 708 aa13.07□□□□□ -0.32
CPNE1-214ENST00000435747 FOXO4P98177 505 aa13.07□□□□□ -0.32
CPNE1-214ENST00000435747 CCL14Q16627 93 aa13.07□□□□□ -0.32
CPNE1-214ENST00000435747 CCDC57Q2TAC2 916 aa13.07□□□□□ -0.32
CPNE1-214ENST00000435747 CDC42EP5Q6NZY7 148 aa13.07□□□□□ -0.32
CPNE1-214ENST00000435747 PRDM12Q9H4Q4 367 aa13.07□□□□□ -0.32
CPNE1-214ENST00000435747 PDLIM7Q9NR12 457 aa13.07□□□□□ -0.32
CPNE1-214ENST00000435747 MORF4L1Q9UBU8 362 aa13.07□□□□□ -0.32
CPNE1-214ENST00000435747 PLXNA1Q9UIW2 1896 aa13.06□□□□□ -0.32
CPNE1-214ENST00000435747 ZDBF2Q9HCK1 2354 aa13.06□□□□□ -0.32
CPNE1-214ENST00000435747 MSCO60682 206 aa13.06□□□□□ -0.32
CPNE1-214ENST00000435747 CTNND1O60716 968 aaKnown RBP13.06□□□□□ -0.32
CPNE1-214ENST00000435747 BMP1P13497 986 aa13.06□□□□□ -0.32
CPNE1-214ENST00000435747 SLC39A5Q6ZMH5 540 aa13.06□□□□□ -0.32
CPNE1-214ENST00000435747 FBXO33Q7Z6M2 555 aa13.06□□□□□ -0.32
CPNE1-214ENST00000435747 CCDC84Q86UT8 332 aaPredicted RBP13.06□□□□□ -0.32
CPNE1-214ENST00000435747 TRMT2AQ8IZ69 625 aaKnown RBP13.06□□□□□ -0.32
CPNE1-214ENST00000435747 LPAR1Q92633 364 aa13.06□□□□□ -0.32
CPNE1-214ENST00000435747 ASCC2Q9H1I8 757 aaPredicted RBP13.06□□□□□ -0.32
CPNE1-214ENST00000435747 FAM198AQ9UFP1 575 aa13.06□□□□□ -0.32
CPNE1-214ENST00000435747 DDX20Q9UHI6 824 aaKnown RBP13.06□□□□□ -0.32
CPNE1-214ENST00000435747 ATRNL1Q5VV63 1379 aa13.06□□□□□ -0.32
CPNE1-214ENST00000435747 IGFBP4P22692 258 aa13.05□□□□□ -0.32
CPNE1-214ENST00000435747 CNGA1P29973 690 aa13.05□□□□□ -0.32
CPNE1-214ENST00000435747 TRIM60Q495X7 471 aa13.05□□□□□ -0.32
CPNE1-214ENST00000435747 CAVIN4Q5BKX8 364 aa13.05□□□□□ -0.32
CPNE1-214ENST00000435747 EPHA10Q5JZY3 1008 aa13.05□□□□□ -0.32
CPNE1-214ENST00000435747 SH3RF1Q7Z6J0 888 aa13.05□□□□□ -0.32
CPNE1-214ENST00000435747 CCAR1Q8IX12 1150 aaKnown RBP13.05□□□□□ -0.32
CPNE1-214ENST00000435747 APBA2Q99767 749 aa13.05□□□□□ -0.32
CPNE1-214ENST00000435747 CXXC1Q9P0U4 656 aaPredicted RBP13.05□□□□□ -0.32
CPNE1-214ENST00000435747 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.05□□□□□ -0.32
CPNE1-214ENST00000435747 MYH13Q9UKX3 1938 aa13.05□□□□□ -0.32
CPNE1-214ENST00000435747 REV3LO60673 3130 aa13.05□□□□□ -0.32
CPNE1-214ENST00000435747 TRIM43BA6NCK2 446 aa13.04□□□□□ -0.32
CPNE1-214ENST00000435747 MAPK4P31152 587 aa13.04□□□□□ -0.32
CPNE1-214ENST00000435747 SLFN5Q08AF3 891 aa13.04□□□□□ -0.32
CPNE1-214ENST00000435747 AAK1Q2M2I8 961 aa13.04□□□□□ -0.32
CPNE1-214ENST00000435747 MFSD14CQ5VZR4 134 aa13.04□□□□□ -0.32
CPNE1-214ENST00000435747 LMBR1LQ6UX01 489 aa13.04□□□□□ -0.32
CPNE1-214ENST00000435747 ZSCAN29Q8IWY8 852 aaPredicted RBP13.04□□□□□ -0.32
CPNE1-214ENST00000435747 ZFPM1Q8IX07 1006 aa13.04□□□□□ -0.32
CPNE1-214ENST00000435747 MRPL50Q8N5N7 158 aaKnown RBP13.04□□□□□ -0.32
CPNE1-214ENST00000435747 GPRC5AQ8NFJ5 357 aa13.04□□□□□ -0.32
CPNE1-214ENST00000435747 USP6NLQ92738 828 aa13.04□□□□□ -0.32
CPNE1-214ENST00000435747 TRIM43Q96BQ3 446 aaPredicted RBP13.04□□□□□ -0.32
CPNE1-214ENST00000435747 KAZALD1Q96I82 304 aa13.04□□□□□ -0.32
CPNE1-214ENST00000435747 USP40Q9NVE5 1235 aa13.04□□□□□ -0.32
CPNE1-214ENST00000435747 DAGLAQ9Y4D2 1042 aa13.04□□□□□ -0.32
CPNE1-214ENST00000435747 CHD7Q9P2D1 2997 aa13.03□□□□□ -0.32
CPNE1-214ENST00000435747 KBTBD13C9JR72 458 aa13.03□□□□□ -0.32
CPNE1-214ENST00000435747 E9PSI1 815 aa13.03□□□□□ -0.32
CPNE1-214ENST00000435747 CCER2I3L3R5 266 aa13.03□□□□□ -0.32
CPNE1-214ENST00000435747 GPR37L1O60883 481 aa13.03□□□□□ -0.32
CPNE1-214ENST00000435747 ALDH1L1O75891 902 aa13.03□□□□□ -0.32
CPNE1-214ENST00000435747 EPHB4P54760 987 aa13.03□□□□□ -0.32
CPNE1-214ENST00000435747 HMGCS2P54868 508 aa13.03□□□□□ -0.32
CPNE1-214ENST00000435747 IRX3P78415 501 aaPredicted RBP13.03□□□□□ -0.32
CPNE1-214ENST00000435747 SPP2Q13103 211 aa13.03□□□□□ -0.32
CPNE1-214ENST00000435747 ADGRE1Q14246 886 aa13.03□□□□□ -0.32
CPNE1-214ENST00000435747 GJC2Q5T442 439 aaPredicted RBP13.03□□□□□ -0.32
CPNE1-214ENST00000435747 CCDC129Q6ZRS4 1044 aa13.03□□□□□ -0.32
CPNE1-214ENST00000435747 UTYO14607 1347 aa13.03□□□□□ -0.32
CPNE1-214ENST00000435747 FAM86C2PA6NEL3 165 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms