RNA–Protein interactions for RNA: ENST00000435432.6

NEDD4L-207, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-207ENST00000435432 GTPBP10A4D1E9 387 aaKnown RBP9.13□□□□□ -0.95
NEDD4L-207ENST00000435432 K7ELQ4 463 aaPredicted RBP9.13□□□□□ -0.95
NEDD4L-207ENST00000435432 CHL1O00533 1208 aa9.13□□□□□ -0.95
NEDD4L-207ENST00000435432 ALDH1L1O75891 902 aa9.13□□□□□ -0.95
NEDD4L-207ENST00000435432 MTHFD1P11586 935 aaKnown RBP9.13□□□□□ -0.95
NEDD4L-207ENST00000435432 VCAM1P19320 739 aa9.13□□□□□ -0.95
NEDD4L-207ENST00000435432 RFC5P40937 340 aa9.13□□□□□ -0.95
NEDD4L-207ENST00000435432 UBXN2AP68543 259 aa9.13□□□□□ -0.95
NEDD4L-207ENST00000435432 FANCCQ00597 558 aa9.13□□□□□ -0.95
NEDD4L-207ENST00000435432 VAC14Q08AM6 782 aa9.13□□□□□ -0.95
NEDD4L-207ENST00000435432 FRAT1Q92837 279 aaPredicted RBP9.13□□□□□ -0.95
NEDD4L-207ENST00000435432 PRKRIP1Q9H875 184 aaPredicted RBP9.13□□□□□ -0.95
NEDD4L-207ENST00000435432 PRKAB1Q9Y478 270 aa9.13□□□□□ -0.95
NEDD4L-207ENST00000435432 CCDC163A0A0D9SF12 145 aa9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 PPP1R3GB7ZBB8 358 aa9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 TTC39AQ5SRH9 613 aa9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 IQCEQ6IPM2 695 aa9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 OTUD6AQ7L8S5 288 aa9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 N4BP2L2Q92802 583 aaPredicted RBP9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 NACC2Q96BF6 587 aa9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 NGLY1Q96IV0 654 aa9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 SPAG5Q96R06 1193 aa9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 C12orf49Q9H741 205 aa9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 SYNDIG1LA6NDD5 238 aa9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 RTCAO00442 366 aaKnown RBP9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 ORC4O43929 436 aa9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 MYBL2P10244 700 aa9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 ALDH1B1P30837 517 aa9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 HNRNPUQ00839 825 aaKnown RBP eCLIP9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 TTF1Q15361 905 aaPredicted RBP9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 LVRNQ6Q4G3 990 aa9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 MCF2L2Q86YR7 1114 aa9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 RBM33Q96EV2 1170 aaKnown RBP9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 FAM163AQ96GL9 167 aaPredicted RBP9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 DNAI2Q9GZS0 605 aa9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 IQCGQ9H095 443 aaKnown RBP9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 CCSER2Q9H7U1 834 aa9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 IPPQ9Y573 584 aa9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 GNAT2P19087 354 aa9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 PPM1FP49593 454 aaPredicted RBP9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 RAB27AP51159 221 aa9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 SCNN1DP51172 638 aa9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 COPAP53621 1224 aa9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 SFSWAPQ12872 951 aaKnown RBP9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 MAP7D1Q3KQU3 841 aa9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 GPATCH4Q5T3I0 446 aaKnown RBP9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 MNS1Q8NEH6 495 aa9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 NUDT16Q96DE0 195 aaKnown RBP9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 BRINP2Q9C0B6 783 aa9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 ZMAT5Q9UDW3 170 aaKnown RBP9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 NSD3Q9BZ95 1437 aa9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 COL24A1Q17RW2 1714 aa9.12□□□□□ -0.95
NEDD4L-207ENST00000435432 ANKRD18BA2A2Z9 1011 aa9.11□□□□□ -0.95
NEDD4L-207ENST00000435432 KATNA1O75449 491 aa9.11□□□□□ -0.95
NEDD4L-207ENST00000435432 RGS20O76081 388 aa9.11□□□□□ -0.95
NEDD4L-207ENST00000435432 NFE2Q16621 373 aaPredicted RBP9.11□□□□□ -0.95
NEDD4L-207ENST00000435432 USP54Q70EL1 1684 aa9.11□□□□□ -0.95
NEDD4L-207ENST00000435432 C11orf74Q86VG3 221 aa9.11□□□□□ -0.95
NEDD4L-207ENST00000435432 C1orf74Q96LT6 269 aa9.11□□□□□ -0.95
NEDD4L-207ENST00000435432 SSH2Q76I76 1423 aa9.11□□□□□ -0.95
NEDD4L-207ENST00000435432 TMEM94Q12767 1356 aa9.11□□□□□ -0.95
NEDD4L-207ENST00000435432 STXBP3O00186 592 aa9.11□□□□□ -0.95
NEDD4L-207ENST00000435432 SGTAO43765 313 aa9.11□□□□□ -0.95
NEDD4L-207ENST00000435432 SERPINB3P29508 390 aa9.11□□□□□ -0.95
NEDD4L-207ENST00000435432 TKFCQ3LXA3 575 aa9.11□□□□□ -0.95
NEDD4L-207ENST00000435432 CCDC178Q5BJE1 867 aa9.11□□□□□ -0.95
NEDD4L-207ENST00000435432 CCDC158Q5M9N0 1113 aa9.11□□□□□ -0.95
NEDD4L-207ENST00000435432 IRGCQ6NXR0 463 aa9.11□□□□□ -0.95
NEDD4L-207ENST00000435432 SRLQ86TD4 932 aa9.11□□□□□ -0.95
NEDD4L-207ENST00000435432 RASSF3Q86WH2 238 aa9.11□□□□□ -0.95
NEDD4L-207ENST00000435432 CABP1Q9NZU7 370 aa9.11□□□□□ -0.95
NEDD4L-207ENST00000435432 C6orf203Q9P0P8 240 aaPredicted RBP9.11□□□□□ -0.95
NEDD4L-207ENST00000435432 POLR3AO14802 1390 aaPredicted RBP9.11□□□□□ -0.95
NEDD4L-207ENST00000435432 BRD4O60885 1362 aaPredicted RBP9.11□□□□□ -0.95
NEDD4L-207ENST00000435432 FDX1P10109 184 aa9.11□□□□□ -0.95
NEDD4L-207ENST00000435432 C21orf62-AS1Q17RA5 79 aa9.11□□□□□ -0.95
NEDD4L-207ENST00000435432 KIF4BQ2VIQ3 1234 aa9.11□□□□□ -0.95
NEDD4L-207ENST00000435432 AP1ARQ63HQ0 302 aa9.11□□□□□ -0.95
NEDD4L-207ENST00000435432 RABEP2Q9H5N1 569 aa9.11□□□□□ -0.95
NEDD4L-207ENST00000435432 UNC45AQ9H3U1 944 aa9.1□□□□□ -0.95
NEDD4L-207ENST00000435432 HOMER2Q9NSB8 354 aa9.1□□□□□ -0.95
NEDD4L-207ENST00000435432 ZIM2Q9NZV7 527 aa9.1□□□□□ -0.95
NEDD4L-207ENST00000435432 TNS1Q9HBL0 1735 aaKnown RBP9.1□□□□□ -0.95
NEDD4L-207ENST00000435432 KTN1Q86UP2 1357 aaKnown RBP9.1□□□□□ -0.95
NEDD4L-207ENST00000435432 ESPNB1AK53 854 aa9.1□□□□□ -0.95
NEDD4L-207ENST00000435432 FOXD2O60548 495 aaPredicted RBP9.1□□□□□ -0.95
NEDD4L-207ENST00000435432 OLFML1Q6UWY5 402 aa9.1□□□□□ -0.95
NEDD4L-207ENST00000435432 PARD3BQ8TEW8 1205 aa9.1□□□□□ -0.95
NEDD4L-207ENST00000435432 AP1M1Q9BXS5 423 aa9.1□□□□□ -0.95
NEDD4L-207ENST00000435432 CCSAPQ6IQ19 270 aaPredicted RBP9.09□□□□□ -0.95
NEDD4L-207ENST00000435432 CYP26C1Q6V0L0 522 aa9.09□□□□□ -0.95
NEDD4L-207ENST00000435432 UBR7Q8N806 425 aa9.09□□□□□ -0.95
NEDD4L-207ENST00000435432 BICD1Q96G01 975 aa9.09□□□□□ -0.95
NEDD4L-207ENST00000435432 SMAD5Q99717 465 aaKnown RBP9.09□□□□□ -0.95
NEDD4L-207ENST00000435432 CAPS2Q9BXY5 557 aa9.09□□□□□ -0.95
NEDD4L-207ENST00000435432 AASDHPPTQ9NRN7 309 aa9.09□□□□□ -0.95
NEDD4L-207ENST00000435432 TRPM3Q9HCF6 1732 aaPredicted RBP9.09□□□□□ -0.95
NEDD4L-207ENST00000435432 BHMG1C9JSJ3 638 aaPredicted RBP9.09□□□□□ -0.95
NEDD4L-207ENST00000435432 NEFHP12036 1026 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms