RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 KCNH3Q9ULD8 1083 aa18.53■□□□□ 0.56
HLA-DQB2-231ENST00000435145 COL1A1P02452 1464 aaPredicted RBP18.53■□□□□ 0.56
HLA-DQB2-231ENST00000435145 SEC23AQ15436 765 aa18.52■□□□□ 0.56
HLA-DQB2-231ENST00000435145 ARMCX5Q6P1M9 558 aa18.52■□□□□ 0.56
HLA-DQB2-231ENST00000435145 DIS3L2Q8IYB7 885 aaKnown RBP18.52■□□□□ 0.56
HLA-DQB2-231ENST00000435145 MIGA1Q8NAN2 632 aa18.52■□□□□ 0.56
HLA-DQB2-231ENST00000435145 MORC2Q9Y6X9 1032 aaPredicted RBP18.52■□□□□ 0.56
HLA-DQB2-231ENST00000435145 MYO1BO43795 1136 aa18.52■□□□□ 0.55
HLA-DQB2-231ENST00000435145 SMC2O95347 1197 aa18.52■□□□□ 0.55
HLA-DQB2-231ENST00000435145 CYP7A1P22680 504 aa18.52■□□□□ 0.55
HLA-DQB2-231ENST00000435145 PTPREP23469 700 aa18.52■□□□□ 0.55
HLA-DQB2-231ENST00000435145 COL5A3P25940 1745 aaPredicted RBP18.52■□□□□ 0.55
HLA-DQB2-231ENST00000435145 FANCCQ00597 558 aa18.52■□□□□ 0.55
HLA-DQB2-231ENST00000435145 MDM2Q00987 491 aaPredicted RBP18.52■□□□□ 0.55
HLA-DQB2-231ENST00000435145 PNOCQ13519 176 aa18.52■□□□□ 0.55
HLA-DQB2-231ENST00000435145 SAFBQ15424 915 aaKnown RBP eCLIP18.52■□□□□ 0.55
HLA-DQB2-231ENST00000435145 LONRF3Q496Y0 759 aa18.52■□□□□ 0.55
HLA-DQB2-231ENST00000435145 RILPL1Q5EBL4 403 aa18.52■□□□□ 0.55
HLA-DQB2-231ENST00000435145 RRP12Q5JTH9 1297 aaKnown RBP18.52■□□□□ 0.55
HLA-DQB2-231ENST00000435145 FOXP4Q8IVH2 680 aaPredicted RBP18.52■□□□□ 0.55
HLA-DQB2-231ENST00000435145 ZNF654Q8IZM8 581 aa18.52■□□□□ 0.55
HLA-DQB2-231ENST00000435145 FANCBQ8NB91 859 aa18.52■□□□□ 0.55
HLA-DQB2-231ENST00000435145 ZKSCAN3Q9BRR0 538 aa18.52■□□□□ 0.55
HLA-DQB2-231ENST00000435145 FBXO2Q9UK22 296 aaPredicted RBP18.52■□□□□ 0.55
HLA-DQB2-231ENST00000435145 ZNF831Q5JPB2 1677 aa18.51■□□□□ 0.55
HLA-DQB2-231ENST00000435145 CACNA1SQ13698 1873 aa18.51■□□□□ 0.55
HLA-DQB2-231ENST00000435145 ERICH2A1L162 156 aa18.51■□□□□ 0.55
HLA-DQB2-231ENST00000435145 MYL5Q02045 173 aa18.51■□□□□ 0.55
HLA-DQB2-231ENST00000435145 PPP2R5BQ15173 497 aa18.51■□□□□ 0.55
HLA-DQB2-231ENST00000435145 SF3B3Q15393 1217 aaKnown RBP18.51■□□□□ 0.55
HLA-DQB2-231ENST00000435145 CLEC4GQ6UXB4 293 aa18.51■□□□□ 0.55
HLA-DQB2-231ENST00000435145 ACSBG1Q96GR2 724 aa18.51■□□□□ 0.55
HLA-DQB2-231ENST00000435145 RIOK1Q9BRS2 568 aaKnown RBP18.51■□□□□ 0.55
HLA-DQB2-231ENST00000435145 NCBP1Q09161 790 aaKnown RBP18.5■□□□□ 0.55
HLA-DQB2-231ENST00000435145 UBE4AQ14139 1066 aa18.5■□□□□ 0.55
HLA-DQB2-231ENST00000435145 PTPN14Q15678 1187 aa18.5■□□□□ 0.55
HLA-DQB2-231ENST00000435145 TMC6Q7Z403 805 aa18.5■□□□□ 0.55
HLA-DQB2-231ENST00000435145 ZNF579Q8NAF0 562 aaKnown RBP18.5■□□□□ 0.55
HLA-DQB2-231ENST00000435145 CCDC112Q8NEF3 446 aa18.5■□□□□ 0.55
HLA-DQB2-231ENST00000435145 KCNJ14Q9UNX9 436 aa18.5■□□□□ 0.55
HLA-DQB2-231ENST00000435145 ZNF652Q9Y2D9 606 aa18.5■□□□□ 0.55
HLA-DQB2-231ENST00000435145 SCN7AQ01118 1682 aa18.5■□□□□ 0.55
HLA-DQB2-231ENST00000435145 MAGEB6P1A0A0J9YX57 407 aa18.49■□□□□ 0.55
HLA-DQB2-231ENST00000435145 LMOD1P29536 600 aaPredicted RBP18.49■□□□□ 0.55
HLA-DQB2-231ENST00000435145 CNNM3Q8NE01 707 aa18.49■□□□□ 0.55
HLA-DQB2-231ENST00000435145 RNF26Q9BY78 433 aaPredicted RBP18.49■□□□□ 0.55
HLA-DQB2-231ENST00000435145 TOMM22Q9NS69 142 aa18.49■□□□□ 0.55
HLA-DQB2-231ENST00000435145 GNL3LQ9NVN8 582 aaKnown RBP18.49■□□□□ 0.55
HLA-DQB2-231ENST00000435145 PCDHA5Q9Y5H7 936 aa18.49■□□□□ 0.55
HLA-DQB2-231ENST00000435145 DUOX1Q9NRD9 1551 aa18.49■□□□□ 0.55
HLA-DQB2-231ENST00000435145 KIF2AO00139 706 aaPredicted RBP18.49■□□□□ 0.55
HLA-DQB2-231ENST00000435145 FGRP09769 529 aa18.49■□□□□ 0.55
HLA-DQB2-231ENST00000435145 ATP1A3P13637 1013 aa18.49■□□□□ 0.55
HLA-DQB2-231ENST00000435145 NT5DC1Q5TFE4 455 aa18.49■□□□□ 0.55
HLA-DQB2-231ENST00000435145 E4F1Q66K89 784 aaPredicted RBP18.49■□□□□ 0.55
HLA-DQB2-231ENST00000435145 ESR2Q92731 530 aa18.49■□□□□ 0.55
HLA-DQB2-231ENST00000435145 SMARCC1Q92922 1105 aaPredicted RBP18.49■□□□□ 0.55
HLA-DQB2-231ENST00000435145 UBAC1Q9BSL1 405 aa18.49■□□□□ 0.55
HLA-DQB2-231ENST00000435145 BSDC1Q9NW68 430 aaPredicted RBP18.49■□□□□ 0.55
HLA-DQB2-231ENST00000435145 SPATA31A5Q5VU36 1347 aa18.49■□□□□ 0.55
HLA-DQB2-231ENST00000435145 SPATA31A7Q8IWB4 1347 aa18.49■□□□□ 0.55
HLA-DQB2-231ENST00000435145 PSDA5PKW4 1024 aaPredicted RBP18.48■□□□□ 0.55
HLA-DQB2-231ENST00000435145 RGL2O15211 777 aa18.48■□□□□ 0.55
HLA-DQB2-231ENST00000435145 BMP6P22004 513 aa18.48■□□□□ 0.55
HLA-DQB2-231ENST00000435145 SFPQP23246 707 aaKnown RBP eCLIP18.48■□□□□ 0.55
HLA-DQB2-231ENST00000435145 FUT2Q10981 343 aa18.48■□□□□ 0.55
HLA-DQB2-231ENST00000435145 ISM2Q6H9L7 571 aa18.48■□□□□ 0.55
HLA-DQB2-231ENST00000435145 C3orf67Q6ZVT6 689 aa18.48■□□□□ 0.55
HLA-DQB2-231ENST00000435145 ANKRD18AQ8IVF6 992 aa18.48■□□□□ 0.55
HLA-DQB2-231ENST00000435145 SDR42E1Q8WUS8 393 aa18.48■□□□□ 0.55
HLA-DQB2-231ENST00000435145 BRIP1Q9BX63 1249 aa18.48■□□□□ 0.55
HLA-DQB2-231ENST00000435145 GYG1P46976 350 aa18.47■□□□□ 0.55
HLA-DQB2-231ENST00000435145 BARGINQ6ZT62 677 aa18.47■□□□□ 0.55
HLA-DQB2-231ENST00000435145 PDCL2Q8N4E4 241 aa18.47■□□□□ 0.55
HLA-DQB2-231ENST00000435145 SHISA4Q96DD7 197 aa18.47■□□□□ 0.55
HLA-DQB2-231ENST00000435145 NOL10Q9BSC4 688 aaKnown RBP18.47■□□□□ 0.55
HLA-DQB2-231ENST00000435145 TNKSO95271 1327 aa18.47■□□□□ 0.55
HLA-DQB2-231ENST00000435145 CBFA2T2O43439 604 aa18.47■□□□□ 0.55
HLA-DQB2-231ENST00000435145 PCP11498 1178 aaKnown RBP18.47■□□□□ 0.55
HLA-DQB2-231ENST00000435145 SARSP49591 514 aaKnown RBP18.47■□□□□ 0.55
HLA-DQB2-231ENST00000435145 GRIN1Q05586 938 aa18.47■□□□□ 0.55
HLA-DQB2-231ENST00000435145 NR5A1Q13285 461 aa18.47■□□□□ 0.55
HLA-DQB2-231ENST00000435145 ERFEQ4G0M1 354 aa18.47■□□□□ 0.55
HLA-DQB2-231ENST00000435145 HOOK1Q9UJC3 728 aaKnown RBP18.47■□□□□ 0.55
HLA-DQB2-231ENST00000435145 IQSEC3Q9UPP2 1182 aaPredicted RBP18.47■□□□□ 0.55
HLA-DQB2-231ENST00000435145 PCDHB6Q9Y5E3 794 aa18.47■□□□□ 0.55
HLA-DQB2-231ENST00000435145 SRPRBQ9Y5M8 271 aaKnown RBP18.47■□□□□ 0.55
HLA-DQB2-231ENST00000435145 OLFM4Q6UX06 510 aa18.46■□□□□ 0.55
HLA-DQB2-231ENST00000435145 ENAHQ8N8S7 591 aaPredicted RBP18.46■□□□□ 0.55
HLA-DQB2-231ENST00000435145 OXER1Q8TDS5 423 aa18.46■□□□□ 0.55
HLA-DQB2-231ENST00000435145 ZNF384Q8TF68 577 aa18.46■□□□□ 0.55
HLA-DQB2-231ENST00000435145 DPF2Q92785 391 aa18.46■□□□□ 0.55
HLA-DQB2-231ENST00000435145 TRMT1Q9NXH9 659 aaKnown RBP18.46■□□□□ 0.55
HLA-DQB2-231ENST00000435145 RAI14Q9P0K7 980 aa18.46■□□□□ 0.55
HLA-DQB2-231ENST00000435145 FOXN1O15353 648 aa18.45■□□□□ 0.54
HLA-DQB2-231ENST00000435145 PDE4BQ07343 736 aa18.45■□□□□ 0.54
HLA-DQB2-231ENST00000435145 PKN1Q16512 942 aa18.45■□□□□ 0.54
HLA-DQB2-231ENST00000435145 SLC10A5Q5PT55 438 aa18.45■□□□□ 0.54
HLA-DQB2-231ENST00000435145 CMTR1Q8N1G2 835 aaKnown RBP18.45■□□□□ 0.54
HLA-DQB2-231ENST00000435145 NUP133Q8WUM0 1156 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms