RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 PI4K2BQ8TCG2 481 aa7.51□□□□□ -1.21
PTPN4-205ENST00000433888 LRRC14Q15048 493 aa7.5□□□□□ -1.21
PTPN4-205ENST00000433888 NKPD1Q17RQ9 610 aa7.5□□□□□ -1.21
PTPN4-205ENST00000433888 ALG1LQ6GMV1 187 aa7.5□□□□□ -1.21
PTPN4-205ENST00000433888 LLGL2Q6P1M3 1020 aa7.5□□□□□ -1.21
PTPN4-205ENST00000433888 ARHGAP27Q6ZUM4 889 aa7.5□□□□□ -1.21
PTPN4-205ENST00000433888 SPACA3Q8IXA5 215 aa7.5□□□□□ -1.21
PTPN4-205ENST00000433888 LRRN4CLQ8ND94 238 aa7.5□□□□□ -1.21
PTPN4-205ENST00000433888 CYP8B1Q9UNU6 501 aa7.5□□□□□ -1.21
PTPN4-205ENST00000433888 SAMM50Q9Y512 469 aa7.5□□□□□ -1.21
PTPN4-205ENST00000433888 CELA3AP09093 270 aa7.49□□□□□ -1.21
PTPN4-205ENST00000433888 PTPN11Q06124 597 aaPredicted RBP7.49□□□□□ -1.21
PTPN4-205ENST00000433888 ZSCAN29Q8IWY8 852 aaPredicted RBP7.49□□□□□ -1.21
PTPN4-205ENST00000433888 C12orf49Q9H741 205 aa7.49□□□□□ -1.21
PTPN4-205ENST00000433888 GTF2IRD1Q9UHL9 959 aa7.49□□□□□ -1.21
PTPN4-205ENST00000433888 PCDHA4Q9UN74 947 aa7.49□□□□□ -1.21
PTPN4-205ENST00000433888 ITIH2P19823 946 aa7.48□□□□□ -1.21
PTPN4-205ENST00000433888 INPP5AQ14642 412 aa7.48□□□□□ -1.21
PTPN4-205ENST00000433888 ANGEL2Q5VTE6 544 aaKnown RBP7.48□□□□□ -1.21
PTPN4-205ENST00000433888 SLC23A3Q6PIS1 610 aa7.48□□□□□ -1.21
PTPN4-205ENST00000433888 FAM168AQ92567 244 aa7.48□□□□□ -1.21
PTPN4-205ENST00000433888 IVNS1ABPQ9Y6Y0 642 aa7.48□□□□□ -1.21
PTPN4-205ENST00000433888 PCNX4Q63HM2 1172 aa7.47□□□□□ -1.21
PTPN4-205ENST00000433888 LRFN4Q6PJG9 635 aa7.47□□□□□ -1.21
PTPN4-205ENST00000433888 CYFIP1Q7L576 1253 aa7.47□□□□□ -1.21
PTPN4-205ENST00000433888 KCT2Q8NC54 265 aa7.47□□□□□ -1.21
PTPN4-205ENST00000433888 FAM8A1Q9UBU6 413 aa7.47□□□□□ -1.21
PTPN4-205ENST00000433888 CNTNAP4Q9C0A0 1308 aa7.47□□□□□ -1.21
PTPN4-205ENST00000433888 ZNF648Q5T619 568 aaPredicted RBP7.46□□□□□ -1.22
PTPN4-205ENST00000433888 FLAD1Q8NFF5 587 aa7.46□□□□□ -1.22
PTPN4-205ENST00000433888 TMEM40Q8WWA1 233 aa7.46□□□□□ -1.22
PTPN4-205ENST00000433888 ASB11Q8WXH4 323 aa7.46□□□□□ -1.22
PTPN4-205ENST00000433888 GAL3ST3Q96A11 431 aa7.46□□□□□ -1.22
PTPN4-205ENST00000433888 SLITRK5O94991 958 aa7.45□□□□□ -1.22
PTPN4-205ENST00000433888 P4HBP07237 508 aaKnown RBP7.45□□□□□ -1.22
PTPN4-205ENST00000433888 USP17L7P0C7H9 530 aa7.45□□□□□ -1.22
PTPN4-205ENST00000433888 SLBPQ14493 270 aaKnown RBP eCLIP7.45□□□□□ -1.22
PTPN4-205ENST00000433888 SV2BQ7L1I2 683 aa7.45□□□□□ -1.22
PTPN4-205ENST00000433888 CDC37L1Q7L3B6 337 aa7.45□□□□□ -1.22
PTPN4-205ENST00000433888 ARMCX6Q7L4S7 300 aa7.45□□□□□ -1.22
PTPN4-205ENST00000433888 ZNF507Q8TCN5 953 aa7.45□□□□□ -1.22
PTPN4-205ENST00000433888 FBRSQ9HAH7 460 aa7.45□□□□□ -1.22
PTPN4-205ENST00000433888 PRDM7Q9NQW5 492 aa7.45□□□□□ -1.22
PTPN4-205ENST00000433888 TIMELESSQ9UNS1 1208 aa7.45□□□□□ -1.22
PTPN4-205ENST00000433888 SPG7Q9UQ90 795 aa7.45□□□□□ -1.22
PTPN4-205ENST00000433888 PITPNM2Q9BZ72 1349 aa7.45□□□□□ -1.22
PTPN4-205ENST00000433888 LRIG2O94898 1065 aa7.44□□□□□ -1.22
PTPN4-205ENST00000433888 CAP2P40123 477 aa7.44□□□□□ -1.22
PTPN4-205ENST00000433888 PICK1Q9NRD5 415 aa7.44□□□□□ -1.22
PTPN4-205ENST00000433888 CDK8P49336 464 aa7.43□□□□□ -1.22
PTPN4-205ENST00000433888 CLCN7P51798 805 aa7.43□□□□□ -1.22
PTPN4-205ENST00000433888 ATP2B2Q01814 1243 aa7.43□□□□□ -1.22
PTPN4-205ENST00000433888 ZP2Q05996 745 aa7.43□□□□□ -1.22
PTPN4-205ENST00000433888 KCNA1Q09470 495 aa7.43□□□□□ -1.22
PTPN4-205ENST00000433888 LCE1DQ5T752 114 aa7.43□□□□□ -1.22
PTPN4-205ENST00000433888 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.43□□□□□ -1.22
PTPN4-205ENST00000433888 C22orf34Q6ZV56 151 aa7.43□□□□□ -1.22
PTPN4-205ENST00000433888 ELMO3Q96BJ8 720 aa7.43□□□□□ -1.22
PTPN4-205ENST00000433888 PLPPR2Q96GM1 343 aa7.43□□□□□ -1.22
PTPN4-205ENST00000433888 WNT10AQ9GZT5 417 aa7.43□□□□□ -1.22
PTPN4-205ENST00000433888 SEMA3GQ9NS98 782 aa7.43□□□□□ -1.22
PTPN4-205ENST00000433888 MAPK8IP1Q9UQF2 711 aa7.43□□□□□ -1.22
PTPN4-205ENST00000433888 PRR33A8MZF0 331 aa7.42□□□□□ -1.22
PTPN4-205ENST00000433888 RBAK-RBAKDNI3L0D1 243 aa7.42□□□□□ -1.22
PTPN4-205ENST00000433888 LDHBP07195 334 aaKnown RBP7.42□□□□□ -1.22
PTPN4-205ENST00000433888 IKZF1Q13422 519 aa7.42□□□□□ -1.22
PTPN4-205ENST00000433888 NKG7Q16617 165 aa7.42□□□□□ -1.22
PTPN4-205ENST00000433888 FRMD6Q96NE9 622 aa7.42□□□□□ -1.22
PTPN4-205ENST00000433888 FOXQ1Q9C009 403 aa7.42□□□□□ -1.22
PTPN4-205ENST00000433888 PRDM5Q9NQX1 630 aaPredicted RBP7.42□□□□□ -1.22
PTPN4-205ENST00000433888 LMCD1Q9NZU5 365 aa7.42□□□□□ -1.22
PTPN4-205ENST00000433888 SNCAIPQ9Y6H5 919 aa7.42□□□□□ -1.22
PTPN4-205ENST00000433888 FARP2O94887 1054 aaPredicted RBP7.41□□□□□ -1.22
PTPN4-205ENST00000433888 ZNF865P0CJ78 1059 aaPredicted RBP7.41□□□□□ -1.22
PTPN4-205ENST00000433888 MESP2Q0VG99 397 aa7.41□□□□□ -1.22
PTPN4-205ENST00000433888 HDXQ7Z353 690 aa7.41□□□□□ -1.22
PTPN4-205ENST00000433888 RIN3Q8TB24 985 aa7.41□□□□□ -1.22
PTPN4-205ENST00000433888 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.41□□□□□ -1.22
PTPN4-205ENST00000433888 CTNND2Q9UQB3 1225 aa7.41□□□□□ -1.22
PTPN4-205ENST00000433888 PRAMEF27A3QJZ7 478 aa7.4□□□□□ -1.22
PTPN4-205ENST00000433888 ZNF503-AS2A6NEH8 195 aa7.4□□□□□ -1.22
PTPN4-205ENST00000433888 GNAT3A8MTJ3 354 aa7.4□□□□□ -1.22
PTPN4-205ENST00000433888 ZNF124Q15973 351 aa7.4□□□□□ -1.22
PTPN4-205ENST00000433888 MFSD2AQ8NA29 543 aa7.4□□□□□ -1.22
PTPN4-205ENST00000433888 ST14Q9Y5Y6 855 aa7.4□□□□□ -1.22
PTPN4-205ENST00000433888 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.39□□□□□ -1.23
PTPN4-205ENST00000433888 GFRA2O00451 464 aa7.39□□□□□ -1.23
PTPN4-205ENST00000433888 TTBK2Q6IQ55 1244 aa7.39□□□□□ -1.23
PTPN4-205ENST00000433888 HSPA12BQ96MM6 686 aa7.39□□□□□ -1.23
PTPN4-205ENST00000433888 RNF19AQ9NV58 838 aa7.39□□□□□ -1.23
PTPN4-205ENST00000433888 TTF2Q9UNY4 1162 aaKnown RBP7.39□□□□□ -1.23
PTPN4-205ENST00000433888 GNA15P30679 374 aa7.38□□□□□ -1.23
PTPN4-205ENST00000433888 RPS26P62854 115 aaKnown RBP7.38□□□□□ -1.23
PTPN4-205ENST00000433888 WIPI1Q5MNZ9 446 aaPredicted RBP7.38□□□□□ -1.23
PTPN4-205ENST00000433888 SFRP5Q5T4F7 317 aa7.38□□□□□ -1.23
PTPN4-205ENST00000433888 FYB2Q5VWT5 728 aa7.38□□□□□ -1.23
PTPN4-205ENST00000433888 ZSWIM9Q86XI8 627 aa7.38□□□□□ -1.23
PTPN4-205ENST00000433888 ATP13A1Q9HD20 1204 aa7.38□□□□□ -1.23
PTPN4-205ENST00000433888 C19orf73Q9NVV2 129 aa7.38□□□□□ -1.23
PTPN4-205ENST00000433888 PCDHB5Q9Y5E4 795 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms