RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 CCDC87Q9NVE4 849 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 UBE4BO95155 1302 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 GBP2P32456 591 aaPredicted RBP4.26□□□□□ -1.73
SHPRH-205ENST00000433355 TMOD4Q9NZQ9 345 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 CALCOCO1Q9P1Z2 691 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 COL2A1P02458 1487 aaPredicted RBP4.26□□□□□ -1.73
SHPRH-205ENST00000433355 ABCA3Q99758 1704 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 IGHDP01880 384 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 XRCC6P12956 609 aaKnown RBP eCLIP4.26□□□□□ -1.73
SHPRH-205ENST00000433355 SSRP1Q08945 709 aaKnown RBP4.26□□□□□ -1.73
SHPRH-205ENST00000433355 SLC39A14Q15043 492 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 PTPN14Q15678 1187 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 LEMD3Q9Y2U8 911 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 LOC102724159A0A0B4J2E5 919 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 PRPF40AO75400 957 aaKnown RBP4.26□□□□□ -1.73
SHPRH-205ENST00000433355 LONP1P36776 959 aaKnown RBP4.26□□□□□ -1.73
SHPRH-205ENST00000433355 WTAPQ15007 396 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 BRD3Q15059 726 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 PWP2Q15269 919 aaKnown RBP4.26□□□□□ -1.73
SHPRH-205ENST00000433355 CLIP2Q9UDT6 1046 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 GOLGA4Q13439 2230 aaKnown RBP4.26□□□□□ -1.73
SHPRH-205ENST00000433355 ZMYM2Q9UBW7 1377 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 DDB1Q16531 1140 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 MICALCLQ6ZW33 695 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 KRT222Q8N1A0 295 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 ANKRD35Q8N283 1001 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 C3orf20Q8ND61 904 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 ERO1AQ96HE7 468 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 CCDC43Q96MW1 224 aaKnown RBP4.26□□□□□ -1.73
SHPRH-205ENST00000433355 APPP05067 770 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 PSMD2Q13200 908 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 GBP6Q6ZN66 633 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 NBPF11Q86T75 865 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 CALML4Q96GE6 196 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 LSG1Q9H089 658 aaKnown RBP4.26□□□□□ -1.73
SHPRH-205ENST00000433355 XDHP47989 1333 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 ORC4O43929 436 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 CYLC1P35663 651 aaPredicted RBP4.26□□□□□ -1.73
SHPRH-205ENST00000433355 PDE4CQ08493 712 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 RASA3Q14644 834 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 SPA17Q15506 151 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 XAGE3Q8WTP9 111 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 TIPINQ9BVW5 301 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 C6orf50Q9HD87 102 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 CWC27Q6UX04 472 aaKnown RBP4.26□□□□□ -1.73
SHPRH-205ENST00000433355 DDX46Q7L014 1031 aaKnown RBP4.26□□□□□ -1.73
SHPRH-205ENST00000433355 RCOR1Q9UKL0 485 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 PES1O00541 588 aaKnown RBP4.26□□□□□ -1.73
SHPRH-205ENST00000433355 SYKP43405 635 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 TYRO3Q06418 890 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 C15orf52Q6ZUT6 534 aaKnown RBP4.26□□□□□ -1.73
SHPRH-205ENST00000433355 KRT26Q7Z3Y9 468 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 GTF3C2Q8WUA4 911 aaPredicted RBP4.26□□□□□ -1.73
SHPRH-205ENST00000433355 NLRP3Q96P20 1036 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 OSBPL5Q9H0X9 879 aaPredicted RBP4.26□□□□□ -1.73
SHPRH-205ENST00000433355 RBM8AQ9Y5S9 174 aaKnown RBP4.26□□□□□ -1.73
SHPRH-205ENST00000433355 EIF3CLB5ME19 914 aaKnown RBP4.25□□□□□ -1.73
SHPRH-205ENST00000433355 KRT18P05783 430 aaKnown RBP4.25□□□□□ -1.73
SHPRH-205ENST00000433355 RTN1Q16799 776 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 MYSM1Q5VVJ2 828 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 TAX1BP1Q86VP1 789 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 EIF3CQ99613 913 aaKnown RBP4.25□□□□□ -1.73
SHPRH-205ENST00000433355 CARNS1A5YM72 827 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 WDHD1O75717 1129 aaPredicted RBP4.25□□□□□ -1.73
SHPRH-205ENST00000433355 CDK17Q00537 523 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 AP3B2Q13367 1082 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 HOMER1Q86YM7 354 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 C10orf67Q8IYJ2 551 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 ZC3H15Q8WU90 426 aaKnown RBP4.25□□□□□ -1.73
SHPRH-205ENST00000433355 HAUS4Q9H6D7 363 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 TIAM2Q8IVF5 1701 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 SMAPO00193 183 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 BBOX1O75936 387 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 GLE1Q53GS7 698 aaKnown RBP4.25□□□□□ -1.73
SHPRH-205ENST00000433355 SYCE1Q8N0S2 351 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 TRIM11Q96F44 468 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 BSDC1Q9NW68 430 aaPredicted RBP4.25□□□□□ -1.73
SHPRH-205ENST00000433355 LRP2BPQ9P2M1 347 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 TRMT112Q9UI30 125 aaKnown RBP4.25□□□□□ -1.73
SHPRH-205ENST00000433355 H7C1W4 665 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 TOP1P11387 765 aaKnown RBP4.25□□□□□ -1.73
SHPRH-205ENST00000433355 GJB2P29033 226 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 MTMR3Q13615 1198 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 CFAP58Q5T655 872 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 RNF10Q8N5U6 811 aaKnown RBP4.25□□□□□ -1.73
SHPRH-205ENST00000433355 NUP133Q8WUM0 1156 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 CUL5Q93034 780 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 MYH10P35580 1976 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 EIF1ADQ8N9N8 165 aaKnown RBP4.25□□□□□ -1.73
SHPRH-205ENST00000433355 BRF1Q92994 677 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 DHTKD1Q96HY7 919 aaPredicted RBP4.25□□□□□ -1.73
SHPRH-205ENST00000433355 SPC24Q8NBT2 197 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 FERMT1Q9BQL6 677 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 METTL14Q9HCE5 456 aaKnown RBP4.25□□□□□ -1.73
SHPRH-205ENST00000433355 RASAL2Q9UJF2 1139 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 CCDC151A5D8V7 595 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 RABGGTAQ92696 567 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 NCAPGQ9BPX3 1015 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 SYCE3A1L190 88 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 LRRC63Q05C16 580 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms