RNA–Protein interactions for RNA: ENST00000432213.1

SEC13-212, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-212ENST00000432213 GNAI2P04899 355 aa17.54■□□□□ 0.4
SEC13-212ENST00000432213 RLBP1P12271 317 aa17.54■□□□□ 0.4
SEC13-212ENST00000432213 FLT3LGP49771 235 aa17.54■□□□□ 0.4
SEC13-212ENST00000432213 SPTY2D1Q68D10 685 aaPredicted RBP17.54■□□□□ 0.4
SEC13-212ENST00000432213 ANKRD13CQ8N6S4 541 aa17.54■□□□□ 0.4
SEC13-212ENST00000432213 RAI14Q9P0K7 980 aa17.54■□□□□ 0.4
SEC13-212ENST00000432213 AGTPBP1Q9UPW5 1226 aa17.54■□□□□ 0.4
SEC13-212ENST00000432213 GJA8P48165 433 aa17.53■□□□□ 0.4
SEC13-212ENST00000432213 FASTKD5Q7L8L6 764 aaKnown RBP17.53■□□□□ 0.4
SEC13-212ENST00000432213 RNF208Q9H0X6 261 aa17.53■□□□□ 0.4
SEC13-212ENST00000432213 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.53■□□□□ 0.4
SEC13-212ENST00000432213 FRMPD3Q5JV73 1810 aa17.52■□□□□ 0.4
SEC13-212ENST00000432213 TBC1D12O60347 775 aa17.52■□□□□ 0.4
SEC13-212ENST00000432213 NPM3O75607 178 aaKnown RBP17.52■□□□□ 0.4
SEC13-212ENST00000432213 INHAP05111 366 aa17.52■□□□□ 0.4
SEC13-212ENST00000432213 CYP2E1P05181 493 aaPredicted RBP17.52■□□□□ 0.4
SEC13-212ENST00000432213 HMGCS2P54868 508 aa17.52■□□□□ 0.4
SEC13-212ENST00000432213 SPP2Q13103 211 aa17.52■□□□□ 0.4
SEC13-212ENST00000432213 PIH1D3Q9NQM4 214 aaKnown RBP17.52■□□□□ 0.4
SEC13-212ENST00000432213 AATFQ9NY61 560 aaKnown RBP eCLIP17.52■□□□□ 0.4
SEC13-212ENST00000432213 HDAC5Q9UQL6 1122 aa17.52■□□□□ 0.4
SEC13-212ENST00000432213 SLC45A1Q9Y2W3 748 aa17.52■□□□□ 0.4
SEC13-212ENST00000432213 NDUFB9Q9Y6M9 179 aa17.52■□□□□ 0.4
SEC13-212ENST00000432213 ADCY3O60266 1144 aa17.51■□□□□ 0.39
SEC13-212ENST00000432213 GJB1P08034 283 aa17.51■□□□□ 0.39
SEC13-212ENST00000432213 TNNI3KQ59H18 835 aa17.51■□□□□ 0.39
SEC13-212ENST00000432213 SLF2Q8IX21 1173 aa17.51■□□□□ 0.39
SEC13-212ENST00000432213 TEX11Q8IYF3 940 aa17.51■□□□□ 0.39
SEC13-212ENST00000432213 NAV1Q8NEY1 1877 aa17.51■□□□□ 0.39
SEC13-212ENST00000432213 FPGT-TNNI3KV9GXZ4 949 aa17.51■□□□□ 0.39
SEC13-212ENST00000432213 SZT2Q5T011 3432 aa17.51■□□□□ 0.39
SEC13-212ENST00000432213 HOXD10P28358 340 aa17.5■□□□□ 0.39
SEC13-212ENST00000432213 CAP2P40123 477 aa17.5■□□□□ 0.39
SEC13-212ENST00000432213 TRIM32Q13049 653 aa17.5■□□□□ 0.39
SEC13-212ENST00000432213 G3BP1Q13283 466 aaKnown RBP eCLIP17.5■□□□□ 0.39
SEC13-212ENST00000432213 GORABQ5T7V8 394 aa17.5■□□□□ 0.39
SEC13-212ENST00000432213 POTEEQ6S8J3 1075 aa17.5■□□□□ 0.39
SEC13-212ENST00000432213 CHRDL2Q6WN34 429 aa17.5■□□□□ 0.39
SEC13-212ENST00000432213 SLAIN1Q8ND83 568 aa17.5■□□□□ 0.39
SEC13-212ENST00000432213 SSH3Q8TE77 659 aa17.5■□□□□ 0.39
SEC13-212ENST00000432213 SMCR8Q8TEV9 937 aaPredicted RBP17.5■□□□□ 0.39
SEC13-212ENST00000432213 U2AF1L4Q8WU68 220 aaKnown RBP17.5■□□□□ 0.39
SEC13-212ENST00000432213 BIN2Q9UBW5 565 aaPredicted RBP17.5■□□□□ 0.39
SEC13-212ENST00000432213 DBNLQ9UJU6 430 aaKnown RBP17.5■□□□□ 0.39
SEC13-212ENST00000432213 RANBP2P49792 3224 aaKnown RBP17.49■□□□□ 0.39
SEC13-212ENST00000432213 FLT1P17948 1338 aa17.49■□□□□ 0.39
SEC13-212ENST00000432213 TNPO2O14787 897 aaKnown RBP17.49■□□□□ 0.39
SEC13-212ENST00000432213 ZAP70P43403 619 aa17.49■□□□□ 0.39
SEC13-212ENST00000432213 DYNLL1P63167 89 aaKnown RBP17.49■□□□□ 0.39
SEC13-212ENST00000432213 MAPKAPK5Q8IW41 473 aa17.49■□□□□ 0.39
SEC13-212ENST00000432213 ZNF280CQ8ND82 737 aa17.49■□□□□ 0.39
SEC13-212ENST00000432213 LRP2BPQ9P2M1 347 aa17.49■□□□□ 0.39
SEC13-212ENST00000432213 RBM27Q9P2N5 1060 aaKnown RBP17.49■□□□□ 0.39
SEC13-212ENST00000432213 GDF11O95390 407 aa17.48■□□□□ 0.39
SEC13-212ENST00000432213 GSTO1P78417 241 aa17.48■□□□□ 0.39
SEC13-212ENST00000432213 DIS3LQ8TF46 1054 aaKnown RBP17.48■□□□□ 0.39
SEC13-212ENST00000432213 TGFBRAP1Q8WUH2 860 aa17.48■□□□□ 0.39
SEC13-212ENST00000432213 ASCC2Q9H1I8 757 aaPredicted RBP17.48■□□□□ 0.39
SEC13-212ENST00000432213 SAP30BPQ9UHR5 308 aaKnown RBP17.48■□□□□ 0.39
SEC13-212ENST00000432213 TAOK2Q9UL54 1235 aa17.48■□□□□ 0.39
SEC13-212ENST00000432213 IPO8O15397 1037 aaKnown RBP17.47■□□□□ 0.39
SEC13-212ENST00000432213 FARP2O94887 1054 aaPredicted RBP17.47■□□□□ 0.39
SEC13-212ENST00000432213 LDHCP07864 332 aa17.47■□□□□ 0.39
SEC13-212ENST00000432213 UQCRFS1P1P0C7P4 283 aa17.47■□□□□ 0.39
SEC13-212ENST00000432213 ATP8B2P98198 1209 aa17.47■□□□□ 0.39
SEC13-212ENST00000432213 IRF5Q13568 498 aa17.47■□□□□ 0.39
SEC13-212ENST00000432213 MTMR2Q13614 643 aa17.47■□□□□ 0.39
SEC13-212ENST00000432213 FAM110CQ1W6H9 321 aa17.47■□□□□ 0.39
SEC13-212ENST00000432213 TTC39AQ5SRH9 613 aa17.47■□□□□ 0.39
SEC13-212ENST00000432213 ZKSCAN2Q63HK3 967 aa17.47■□□□□ 0.39
SEC13-212ENST00000432213 NAA16Q6N069 864 aaPredicted RBP17.47■□□□□ 0.39
SEC13-212ENST00000432213 PROCA1Q8NCQ7 364 aaPredicted RBP17.47■□□□□ 0.39
SEC13-212ENST00000432213 DPF3Q92784 378 aa17.47■□□□□ 0.39
SEC13-212ENST00000432213 DEFB118Q96PH6 123 aa17.47■□□□□ 0.39
SEC13-212ENST00000432213 CCDC8Q9H0W5 538 aaPredicted RBP17.47■□□□□ 0.39
SEC13-212ENST00000432213 PRO3102Q9H379 93 aa17.47■□□□□ 0.39
SEC13-212ENST00000432213 TXNRD2Q9NNW7 524 aa17.47■□□□□ 0.39
SEC13-212ENST00000432213 PAK6Q9NQU5 681 aaPredicted RBP17.47■□□□□ 0.39
SEC13-212ENST00000432213 PALD1Q9ULE6 856 aa17.47■□□□□ 0.39
SEC13-212ENST00000432213 SURF6O75683 361 aaKnown RBP17.46■□□□□ 0.39
SEC13-212ENST00000432213 SGPL1O95470 568 aa17.46■□□□□ 0.39
SEC13-212ENST00000432213 EVX2Q03828 476 aa17.46■□□□□ 0.39
SEC13-212ENST00000432213 SH3D19Q5HYK7 790 aa17.46■□□□□ 0.39
SEC13-212ENST00000432213 EAF2Q96CJ1 260 aaPredicted RBP17.46■□□□□ 0.39
SEC13-212ENST00000432213 ANTXR1Q9H6X2 564 aa17.46■□□□□ 0.39
SEC13-212ENST00000432213 GPR108Q9NPR9 543 aa17.46■□□□□ 0.39
SEC13-212ENST00000432213 GJD2Q9UKL4 321 aa17.46■□□□□ 0.39
SEC13-212ENST00000432213 USP17L5A8MUK1 530 aa17.45■□□□□ 0.38
SEC13-212ENST00000432213 PPP4CP60510 307 aa17.45■□□□□ 0.38
SEC13-212ENST00000432213 UBXN2AP68543 259 aa17.45■□□□□ 0.38
SEC13-212ENST00000432213 METTL16Q86W50 562 aaKnown RBP17.45■□□□□ 0.38
SEC13-212ENST00000432213 PXYLP1Q8TE99 480 aa17.45■□□□□ 0.38
SEC13-212ENST00000432213 ZBTB7BO15156 539 aaPredicted RBP17.44■□□□□ 0.38
SEC13-212ENST00000432213 MNX1P50219 401 aaPredicted RBP17.44■□□□□ 0.38
SEC13-212ENST00000432213 MIGA1Q8NAN2 632 aa17.44■□□□□ 0.38
SEC13-212ENST00000432213 NKX2-3Q8TAU0 364 aa17.44■□□□□ 0.38
SEC13-212ENST00000432213 CRISPLD2Q9H0B8 497 aa17.44■□□□□ 0.38
SEC13-212ENST00000432213 HERC5Q9UII4 1024 aaKnown RBP17.44■□□□□ 0.38
SEC13-212ENST00000432213 RLFQ13129 1914 aa17.44■□□□□ 0.38
SEC13-212ENST00000432213 MYH8P13535 1937 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms