RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 TMEM238LA0A1B0GVL6 79 aa4.05□□□□□ -1.76
CDC40-204ENST00000431461 CPNE3O75131 537 aaKnown RBP4.05□□□□□ -1.76
CDC40-204ENST00000431461 PRPF40BQ6NWY9 871 aaKnown RBP4.05□□□□□ -1.76
CDC40-204ENST00000431461 FAM214BQ7L5A3 538 aa4.05□□□□□ -1.76
CDC40-204ENST00000431461 HEXIM2Q96MH2 286 aaKnown RBP4.05□□□□□ -1.76
CDC40-204ENST00000431461 ZCCHC4Q9H5U6 513 aa4.05□□□□□ -1.76
CDC40-204ENST00000431461 CARS2Q9HA77 564 aaKnown RBP4.05□□□□□ -1.76
CDC40-204ENST00000431461 ABCB6Q9NP58 842 aa4.05□□□□□ -1.76
CDC40-204ENST00000431461 EGFL7Q9UHF1 273 aa4.05□□□□□ -1.76
CDC40-204ENST00000431461 ETV2O00321 342 aaPredicted RBP4.04□□□□□ -1.76
CDC40-204ENST00000431461 ICMTO60725 284 aa4.04□□□□□ -1.76
CDC40-204ENST00000431461 ABL1P00519 1130 aa4.04□□□□□ -1.76
CDC40-204ENST00000431461 GSTP1P09211 210 aaKnown RBP4.04□□□□□ -1.76
CDC40-204ENST00000431461 FAAP100Q0VG06 881 aa4.04□□□□□ -1.76
CDC40-204ENST00000431461 NFIXQ14938 502 aa4.04□□□□□ -1.76
CDC40-204ENST00000431461 ERICH6BQ5W0A0 696 aa4.04□□□□□ -1.76
CDC40-204ENST00000431461 KCNN1Q92952 543 aa4.04□□□□□ -1.76
CDC40-204ENST00000431461 DNAJC25Q9H1X3 360 aa4.04□□□□□ -1.76
CDC40-204ENST00000431461 WDR26Q9H7D7 661 aa4.04□□□□□ -1.76
CDC40-204ENST00000431461 NPHS2Q9NP85 383 aa4.04□□□□□ -1.76
CDC40-204ENST00000431461 ANO2Q9NQ90 1003 aa4.04□□□□□ -1.76
CDC40-204ENST00000431461 RTEL1Q9NZ71 1219 aa4.04□□□□□ -1.76
CDC40-204ENST00000431461 BRPF3Q9ULD4 1205 aa4.04□□□□□ -1.76
CDC40-204ENST00000431461 A0A0G2JLL6 359 aaPredicted RBP4.03□□□□□ -1.76
CDC40-204ENST00000431461 NEFMP07197 916 aa4.03□□□□□ -1.76
CDC40-204ENST00000431461 KRTAP10-2P60368 255 aa4.03□□□□□ -1.76
CDC40-204ENST00000431461 PDE3BQ13370 1112 aa4.03□□□□□ -1.76
CDC40-204ENST00000431461 ZNF211Q13398 564 aaPredicted RBP4.03□□□□□ -1.76
CDC40-204ENST00000431461 ZC3H12AQ5D1E8 599 aaKnown RBP4.03□□□□□ -1.76
CDC40-204ENST00000431461 PDZD3Q86UT5 571 aa4.03□□□□□ -1.76
CDC40-204ENST00000431461 NPAS4Q8IUM7 802 aa4.03□□□□□ -1.76
CDC40-204ENST00000431461 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.03□□□□□ -1.76
CDC40-204ENST00000431461 SPACA3Q8IXA5 215 aa4.03□□□□□ -1.76
CDC40-204ENST00000431461 ISL2Q96A47 359 aa4.03□□□□□ -1.76
CDC40-204ENST00000431461 CCDC74AQ96AQ1 378 aa4.03□□□□□ -1.76
CDC40-204ENST00000431461 KCNC2Q96PR1 638 aa4.03□□□□□ -1.76
CDC40-204ENST00000431461 CITED4Q96RK1 184 aa4.03□□□□□ -1.76
CDC40-204ENST00000431461 FAM129BQ96TA1 746 aa4.03□□□□□ -1.76
CDC40-204ENST00000431461 IRF2BPLQ9H1B7 796 aa4.03□□□□□ -1.76
CDC40-204ENST00000431461 TRAK1Q9UPV9 953 aa4.03□□□□□ -1.76
CDC40-204ENST00000431461 SUPT5HO00267 1087 aaKnown RBP4.02□□□□□ -1.77
CDC40-204ENST00000431461 ADRB1P08588 477 aa4.02□□□□□ -1.77
CDC40-204ENST00000431461 ERVK-24P63145 666 aa4.02□□□□□ -1.77
CDC40-204ENST00000431461 ORC1Q13415 861 aa4.02□□□□□ -1.77
CDC40-204ENST00000431461 HOMEZQ8IX15 550 aa4.02□□□□□ -1.77
CDC40-204ENST00000431461 CCDC82Q8N4S0 544 aa4.02□□□□□ -1.77
CDC40-204ENST00000431461 RNF214Q8ND24 703 aa4.02□□□□□ -1.77
CDC40-204ENST00000431461 KCNB2Q92953 911 aa4.02□□□□□ -1.77
CDC40-204ENST00000431461 C19orf73Q9NVV2 129 aa4.02□□□□□ -1.77
CDC40-204ENST00000431461 PATL2C9JE40 543 aaKnown RBP4.01□□□□□ -1.77
CDC40-204ENST00000431461 RBAK-RBAKDNI3L0D1 243 aa4.01□□□□□ -1.77
CDC40-204ENST00000431461 RAC2P15153 192 aa4.01□□□□□ -1.77
CDC40-204ENST00000431461 BMP7P18075 431 aa4.01□□□□□ -1.77
CDC40-204ENST00000431461 PPP2R3AQ06190 1150 aa4.01□□□□□ -1.77
CDC40-204ENST00000431461 GRM2Q14416 872 aa4.01□□□□□ -1.77
CDC40-204ENST00000431461 NKPD1Q17RQ9 610 aa4.01□□□□□ -1.77
CDC40-204ENST00000431461 PRRT2Q7Z6L0 340 aaPredicted RBP4.01□□□□□ -1.77
CDC40-204ENST00000431461 MARCH10Q8NA82 808 aaPredicted RBP4.01□□□□□ -1.77
CDC40-204ENST00000431461 ATP13A1Q9HD20 1204 aa4.01□□□□□ -1.77
CDC40-204ENST00000431461 TMEM39AQ9NV64 488 aa4.01□□□□□ -1.77
CDC40-204ENST00000431461 CSADQ9Y600 493 aa4.01□□□□□ -1.77
CDC40-204ENST00000431461 GNAT3A8MTJ3 354 aa4□□□□□ -1.77
CDC40-204ENST00000431461 OVOL3O00110 214 aa4□□□□□ -1.77
CDC40-204ENST00000431461 EIF1AYO14602 144 aaKnown RBP4□□□□□ -1.77
CDC40-204ENST00000431461 NDUFB5O43674 189 aa4□□□□□ -1.77
CDC40-204ENST00000431461 GADD45BO75293 160 aaPredicted RBP4□□□□□ -1.77
CDC40-204ENST00000431461 XRCC5P13010 732 aaKnown RBP4□□□□□ -1.77
CDC40-204ENST00000431461 ARNTP27540 789 aa4□□□□□ -1.77
CDC40-204ENST00000431461 ARHGAP4P98171 946 aa4□□□□□ -1.77
CDC40-204ENST00000431461 NFKB2Q00653 900 aa4□□□□□ -1.77
CDC40-204ENST00000431461 CDKAL1Q5VV42 579 aa4□□□□□ -1.77
CDC40-204ENST00000431461 B4GALNT3Q6L9W6 998 aa4□□□□□ -1.77
CDC40-204ENST00000431461 UBE3DQ7Z6J8 389 aa4□□□□□ -1.77
CDC40-204ENST00000431461 TMEM151BQ8IW70 566 aa4□□□□□ -1.77
CDC40-204ENST00000431461 ABHD4Q8TB40 342 aa4□□□□□ -1.77
CDC40-204ENST00000431461 BAHD1Q8TBE0 780 aaPredicted RBP4□□□□□ -1.77
CDC40-204ENST00000431461 PPP4R2Q9NY27 417 aa4□□□□□ -1.77
CDC40-204ENST00000431461 CACNA2D2Q9NY47 1150 aa4□□□□□ -1.77
CDC40-204ENST00000431461 CNTNAP4Q9C0A0 1308 aa3.99□□□□□ -1.77
CDC40-204ENST00000431461 ARID3CA6NKF2 412 aa3.99□□□□□ -1.77
CDC40-204ENST00000431461 CELA3BP08861 270 aa3.99□□□□□ -1.77
CDC40-204ENST00000431461 TCERG1LQ5VWI1 586 aa3.99□□□□□ -1.77
CDC40-204ENST00000431461 DTHD1Q6ZMT9 781 aa3.99□□□□□ -1.77
CDC40-204ENST00000431461 GLYCTKQ8IVS8 523 aa3.99□□□□□ -1.77
CDC40-204ENST00000431461 PRDM10Q9NQV6 1147 aa3.99□□□□□ -1.77
CDC40-204ENST00000431461 GPN3Q9UHW5 284 aaPredicted RBP3.99□□□□□ -1.77
CDC40-204ENST00000431461 USTQ9Y2C2 406 aa3.99□□□□□ -1.77
CDC40-204ENST00000431461 CARNS1A5YM72 827 aa3.98□□□□□ -1.77
CDC40-204ENST00000431461 H3BS24 57 aa3.98□□□□□ -1.77
CDC40-204ENST00000431461 PEX10O60683 326 aa3.98□□□□□ -1.77
CDC40-204ENST00000431461 SEMA7AO75326 666 aa3.98□□□□□ -1.77
CDC40-204ENST00000431461 EOMESO95936 686 aa3.98□□□□□ -1.77
CDC40-204ENST00000431461 ERVFC1P60507 584 aa3.98□□□□□ -1.77
CDC40-204ENST00000431461 RING1Q06587 406 aa3.98□□□□□ -1.77
CDC40-204ENST00000431461 ZNF252P-AS1Q0IIN9 211 aa3.98□□□□□ -1.77
CDC40-204ENST00000431461 ZXDCQ2QGD7 858 aaPredicted RBP3.98□□□□□ -1.77
CDC40-204ENST00000431461 SKOR2Q2VWA4 1001 aaPredicted RBP3.98□□□□□ -1.77
CDC40-204ENST00000431461 ZNF385BQ569K4 471 aa3.98□□□□□ -1.77
CDC40-204ENST00000431461 C22orf34Q6ZV56 151 aa3.98□□□□□ -1.77
CDC40-204ENST00000431461 SULF2Q8IWU5 870 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms