RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 SUPT20HL2P0C7V6 817 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 POLR2MP0CAP2 368 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 ZNF18P17022 549 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 CRKLP46109 303 aaKnown RBP5.08□□□□□ -1.6
LRRK2-204ENST00000430804 METAP2P50579 478 aaKnown RBP eCLIP5.08□□□□□ -1.6
LRRK2-204ENST00000430804 BFSP2Q13515 415 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 SPDYE2Q495Y8 402 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 CWC27Q6UX04 472 aaKnown RBP5.08□□□□□ -1.6
LRRK2-204ENST00000430804 CFAP36Q96G28 342 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 MAK16Q9BXY0 300 aaKnown RBP5.08□□□□□ -1.6
LRRK2-204ENST00000430804 CCDC8Q9H0W5 538 aaPredicted RBP5.08□□□□□ -1.6
LRRK2-204ENST00000430804 SLC52A2Q9HAB3 445 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 IL1RAPL2Q9NP60 686 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 ECHDC1Q9NTX5 307 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 SLC4A7Q9Y6M7 1214 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 SUPT6HQ7KZ85 1726 aaKnown RBP5.08□□□□□ -1.6
LRRK2-204ENST00000430804 CLRN2A0PK11 232 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 GOLGA6L9A6NEM1 432 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 HEXIM1O94992 359 aaKnown RBP5.08□□□□□ -1.6
LRRK2-204ENST00000430804 IL6STP40189 918 aaPredicted RBP5.08□□□□□ -1.6
LRRK2-204ENST00000430804 RTN1Q16799 776 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 BTBD8Q5XKL5 378 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 PUS7Q96PZ0 661 aaKnown RBP5.08□□□□□ -1.6
LRRK2-204ENST00000430804 SRPK1Q96SB4 655 aaKnown RBP5.08□□□□□ -1.6
LRRK2-204ENST00000430804 GBA2Q9HCG7 927 aaPredicted RBP5.08□□□□□ -1.6
LRRK2-204ENST00000430804 DYRK4Q9NR20 520 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 AKT3Q9Y243 479 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 TRIM17Q9Y577 477 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 RTL1A6NKG5 1358 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 EIF3DO15371 548 aaKnown RBP eCLIP5.07□□□□□ -1.6
LRRK2-204ENST00000430804 BCAR3O75815 825 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 CFBP00751 764 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 TNNC2P02585 160 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 RPLP2P05387 115 aaKnown RBP5.07□□□□□ -1.6
LRRK2-204ENST00000430804 FCER1AP12319 257 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 CIITAP33076 1130 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 PDZD4Q76G19 769 aaPredicted RBP5.07□□□□□ -1.6
LRRK2-204ENST00000430804 MAGEB6Q8N7X4 407 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 MNS1Q8NEH6 495 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 LPIN2Q92539 896 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 KIFAP3Q92845 792 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 JAKMIP1Q96N16 626 aaKnown RBP5.07□□□□□ -1.6
LRRK2-204ENST00000430804 TSEN34Q9BSV6 310 aaKnown RBP5.07□□□□□ -1.6
LRRK2-204ENST00000430804 PARP2Q9UGN5 583 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 IPPQ9Y573 584 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 ERBB4Q15303 1308 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 ADGRF5Q8IZF2 1346 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 KAT6BQ8WYB5 2073 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 ASNSP08243 561 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 RAG1P15918 1043 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 ICA1Q05084 483 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 Q3C1V9 767 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 ALDH1L2Q3SY69 923 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 ARHGAP15Q53QZ3 475 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 HSP90B2PQ58FF3 399 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 ZNF790Q6PG37 636 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 TTC1Q99614 292 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.07□□□□□ -1.6
LRRK2-204ENST00000430804 DDX49Q9Y6V7 483 aaKnown RBP5.07□□□□□ -1.6
LRRK2-204ENST00000430804 GPATCH8Q9UKJ3 1502 aaKnown RBP5.07□□□□□ -1.6
LRRK2-204ENST00000430804 PI4K2BG5E9Z4 385 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 NAA30Q147X3 362 aaPredicted RBP5.07□□□□□ -1.6
LRRK2-204ENST00000430804 PI4K2BQ8TCG2 481 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 NCAPGQ9BPX3 1015 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.07□□□□□ -1.6
LRRK2-204ENST00000430804 EHD2Q9NZN4 543 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 CGNQ9P2M7 1197 aaKnown RBP5.07□□□□□ -1.6
LRRK2-204ENST00000430804 ZNRF3Q9ULT6 936 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 FAM169AQ9Y6X4 670 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 GOLGA6L10A0A0M3HER8 536 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 TRIM75PA6NK02 468 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 GIPC1O14908 333 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 PRMT3O60678 531 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 FDX1P10109 184 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 RGS2P41220 211 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 KRT85P78386 507 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 USP17L2Q6R6M4 530 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 ADAT2Q7Z6V5 191 aaKnown RBP5.07□□□□□ -1.6
LRRK2-204ENST00000430804 FAM160B2Q86V87 743 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 ATRIPQ8WXE1 791 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 PHKBQ93100 1093 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 TBC1D2Q9BYX2 928 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 TSPYL1Q9H0U9 437 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 TXNDC16Q9P2K2 825 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 FRMD4BQ9Y2L6 1034 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 PCDHA1Q9Y5I3 950 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 CCND2P30279 289 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 ARPP19P56211 112 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 LARP1BQ659C4 914 aaKnown RBP5.07□□□□□ -1.6
LRRK2-204ENST00000430804 RSRC2Q7L4I2 434 aaKnown RBP5.07□□□□□ -1.6
LRRK2-204ENST00000430804 RYBPQ8N488 228 aaPredicted RBP5.07□□□□□ -1.6
LRRK2-204ENST00000430804 DDX17Q92841 729 aaKnown RBP5.07□□□□□ -1.6
LRRK2-204ENST00000430804 DDX21Q9NR30 783 aaKnown RBP eCLIP5.07□□□□□ -1.6
LRRK2-204ENST00000430804 HMG20BQ9P0W2 317 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 JAG2Q9Y219 1238 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 NPATQ14207 1427 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 RALGAPBQ86X10 1494 aa5.07□□□□□ -1.6
LRRK2-204ENST00000430804 SOCS7O14512 581 aa5.06□□□□□ -1.6
LRRK2-204ENST00000430804 CAPN9O14815 690 aa5.06□□□□□ -1.6
LRRK2-204ENST00000430804 EPHX2P34913 555 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms