RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 SHROOM1Q2M3G4 852 aaPredicted RBP15.28■□□□□ 0.04
SMPD4-204ENST00000430682 SLFNL1Q499Z3 407 aa15.28■□□□□ 0.04
SMPD4-204ENST00000430682 DNAJC18Q9H819 358 aa15.28■□□□□ 0.04
SMPD4-204ENST00000430682 AFG3L2Q9Y4W6 797 aa15.28■□□□□ 0.04
SMPD4-204ENST00000430682 TRIM17Q9Y577 477 aa15.28■□□□□ 0.04
SMPD4-204ENST00000430682 NAV1Q8NEY1 1877 aa15.28■□□□□ 0.04
SMPD4-204ENST00000430682 LOC285556D6RIA3 1793 aa15.28■□□□□ 0.04
SMPD4-204ENST00000430682 FLT1P17948 1338 aa15.27■□□□□ 0.04
SMPD4-204ENST00000430682 CTNND1O60716 968 aaKnown RBP15.27■□□□□ 0.04
SMPD4-204ENST00000430682 RAB11FIP3O75154 756 aa15.27■□□□□ 0.04
SMPD4-204ENST00000430682 CHGBP05060 677 aa15.27■□□□□ 0.04
SMPD4-204ENST00000430682 CTGFP29279 349 aa15.27■□□□□ 0.04
SMPD4-204ENST00000430682 SLC4A8Q2Y0W8 1093 aa15.27■□□□□ 0.04
SMPD4-204ENST00000430682 FBXO46Q6PJ61 603 aaPredicted RBP15.27■□□□□ 0.04
SMPD4-204ENST00000430682 CLASRPQ8N2M8 674 aaKnown RBP15.27■□□□□ 0.04
SMPD4-204ENST00000430682 YTHDC1Q96MU7 727 aaKnown RBP15.27■□□□□ 0.04
SMPD4-204ENST00000430682 ARHGAP39Q9C0H5 1083 aa15.27■□□□□ 0.04
SMPD4-204ENST00000430682 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.27■□□□□ 0.044e-6■■□□□ 13.5
SMPD4-204ENST00000430682 ZFYVE28Q9HCC9 887 aa15.27■□□□□ 0.04
SMPD4-204ENST00000430682 SAP30BPQ9UHR5 308 aaKnown RBP15.27■□□□□ 0.04
SMPD4-204ENST00000430682 PALD1Q9ULE6 856 aa15.27■□□□□ 0.04
SMPD4-204ENST00000430682 PDHXO00330 501 aa15.26■□□□□ 0.03
SMPD4-204ENST00000430682 TLR2O60603 784 aa15.26■□□□□ 0.03
SMPD4-204ENST00000430682 BAG3O95817 575 aa15.26■□□□□ 0.03
SMPD4-204ENST00000430682 PKN2Q16513 984 aaKnown RBP15.26■□□□□ 0.03
SMPD4-204ENST00000430682 ANKRD23Q86SG2 305 aa15.26■□□□□ 0.03
SMPD4-204ENST00000430682 PCDHB15Q9Y5E8 787 aa15.26■□□□□ 0.03
SMPD4-204ENST00000430682 A0A0G2JLL6 359 aaPredicted RBP15.25■□□□□ 0.03
SMPD4-204ENST00000430682 GOLIM4O00461 696 aa15.25■□□□□ 0.03
SMPD4-204ENST00000430682 CXCL11O14625 94 aa15.25■□□□□ 0.03
SMPD4-204ENST00000430682 ECM2O94769 699 aaPredicted RBP15.25■□□□□ 0.03
SMPD4-204ENST00000430682 IFIT2P09913 472 aaKnown RBP15.25■□□□□ 0.03
SMPD4-204ENST00000430682 EVX2Q03828 476 aa15.25■□□□□ 0.03
SMPD4-204ENST00000430682 C17orf99Q6UX52 265 aa15.25■□□□□ 0.03
SMPD4-204ENST00000430682 PRRT2Q7Z6L0 340 aaPredicted RBP15.25■□□□□ 0.03
SMPD4-204ENST00000430682 METTL16Q86W50 562 aaKnown RBP15.25■□□□□ 0.03
SMPD4-204ENST00000430682 ERO1AQ96HE7 468 aa15.25■□□□□ 0.03
SMPD4-204ENST00000430682 DNAJC2Q99543 621 aaKnown RBP15.25■□□□□ 0.03
SMPD4-204ENST00000430682 RIOK1Q9BRS2 568 aaKnown RBP15.25■□□□□ 0.03
SMPD4-204ENST00000430682 NOL10Q9BSC4 688 aaKnown RBP15.25■□□□□ 0.03
SMPD4-204ENST00000430682 ZCCHC17Q9NP64 241 aaKnown RBP15.25■□□□□ 0.03
SMPD4-204ENST00000430682 CPA4Q9UI42 421 aa15.25■□□□□ 0.03
SMPD4-204ENST00000430682 PTPN22Q9Y2R2 807 aa15.25■□□□□ 0.03
SMPD4-204ENST00000430682 TCRBV5S4A2TA0A5A2 114 aa15.24■□□□□ 0.03
SMPD4-204ENST00000430682 CYP2C8P10632 490 aa15.24■□□□□ 0.03
SMPD4-204ENST00000430682 PDE6AP16499 860 aa15.24■□□□□ 0.03
SMPD4-204ENST00000430682 PLCG2P16885 1265 aa15.24■□□□□ 0.03
SMPD4-204ENST00000430682 CAP2P40123 477 aa15.24■□□□□ 0.03
SMPD4-204ENST00000430682 RRP1P56182 461 aaKnown RBP15.24■□□□□ 0.03
SMPD4-204ENST00000430682 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.24■□□□□ 0.03
SMPD4-204ENST00000430682 BOLA2Q9H3K6 86 aa15.24■□□□□ 0.03
SMPD4-204ENST00000430682 CHMP4BQ9H444 224 aaKnown RBP15.24■□□□□ 0.03
SMPD4-204ENST00000430682 DCTPP1Q9H773 170 aa15.24■□□□□ 0.03
SMPD4-204ENST00000430682 EFCC1Q9HA90 598 aa15.24■□□□□ 0.03
SMPD4-204ENST00000430682 PICK1Q9NRD5 415 aa15.24■□□□□ 0.03
SMPD4-204ENST00000430682 RBBP6Q7Z6E9 1792 aaKnown RBP15.24■□□□□ 0.03
SMPD4-204ENST00000430682 MYH8P13535 1937 aa15.23■□□□□ 0.03
SMPD4-204ENST00000430682 TRIM75PA6NK02 468 aa15.23■□□□□ 0.03
SMPD4-204ENST00000430682 MAP3K12Q12852 859 aa15.23■□□□□ 0.03
SMPD4-204ENST00000430682 PI4KBQ9UBF8 816 aa15.23■□□□□ 0.03
SMPD4-204ENST00000430682 ZNF532Q9HCE3 1301 aa15.22■□□□□ 0.03
SMPD4-204ENST00000430682 IGSF3O75054 1194 aa15.22■□□□□ 0.03
SMPD4-204ENST00000430682 ATP5JP18859 108 aa15.22■□□□□ 0.03
SMPD4-204ENST00000430682 SPP2Q13103 211 aa15.22■□□□□ 0.03
SMPD4-204ENST00000430682 TREML2Q5T2D2 321 aa15.22■□□□□ 0.03
SMPD4-204ENST00000430682 SLC9C2Q5TAH2 1124 aa15.22■□□□□ 0.03
SMPD4-204ENST00000430682 GADL1Q6ZQY3 521 aa15.22■□□□□ 0.03
SMPD4-204ENST00000430682 LRRCC1Q9C099 1032 aa15.22■□□□□ 0.03
SMPD4-204ENST00000430682 DHX36Q9H2U1 1008 aaKnown RBP15.22■□□□□ 0.03
SMPD4-204ENST00000430682 HERC5Q9UII4 1024 aaKnown RBP15.22■□□□□ 0.03
SMPD4-204ENST00000430682 GDF11O95390 407 aa15.21■□□□□ 0.03
SMPD4-204ENST00000430682 BCRP11274 1271 aa15.21■□□□□ 0.03
SMPD4-204ENST00000430682 LACTBP83111 547 aaPredicted RBP15.21■□□□□ 0.03
SMPD4-204ENST00000430682 TSHZ3Q63HK5 1081 aa15.21■□□□□ 0.03
SMPD4-204ENST00000430682 CRBNQ96SW2 442 aa15.21■□□□□ 0.03
SMPD4-204ENST00000430682 HAUS7Q99871 368 aa15.21■□□□□ 0.03
SMPD4-204ENST00000430682 PAG1Q9NWQ8 432 aa15.21■□□□□ 0.03
SMPD4-204ENST00000430682 PTCH2Q9Y6C5 1203 aa15.21■□□□□ 0.03
SMPD4-204ENST00000430682 SMIM22K7EJ46 135 aa15.2■□□□□ 0.02
SMPD4-204ENST00000430682 PLCD1P51178 756 aa15.2■□□□□ 0.02
SMPD4-204ENST00000430682 MLLT1Q03111 559 aaPredicted RBP15.2■□□□□ 0.02
SMPD4-204ENST00000430682 TTF1Q15361 905 aaPredicted RBP15.2■□□□□ 0.02
SMPD4-204ENST00000430682 FOXP4Q8IVH2 680 aaPredicted RBP15.2■□□□□ 0.02
SMPD4-204ENST00000430682 LCORLQ8N3X6 602 aa15.2■□□□□ 0.02
SMPD4-204ENST00000430682 TRIM47Q96LD4 638 aa15.2■□□□□ 0.02
SMPD4-204ENST00000430682 MAGEB6P1A0A0J9YX57 407 aa15.19■□□□□ 0.02
SMPD4-204ENST00000430682 USP17L5A8MUK1 530 aa15.19■□□□□ 0.02
SMPD4-204ENST00000430682 PRKAB2O43741 272 aa15.19■□□□□ 0.02
SMPD4-204ENST00000430682 ADD2P35612 726 aa15.19■□□□□ 0.02
SMPD4-204ENST00000430682 USP5P45974 858 aa15.19■□□□□ 0.02
SMPD4-204ENST00000430682 HMGCS2P54868 508 aa15.19■□□□□ 0.02
SMPD4-204ENST00000430682 FASTKD5Q7L8L6 764 aaKnown RBP15.19■□□□□ 0.02
SMPD4-204ENST00000430682 ZNF280CQ8ND82 737 aa15.19■□□□□ 0.02
SMPD4-204ENST00000430682 OTUD7AQ8TE49 926 aaPredicted RBP15.19■□□□□ 0.02
SMPD4-204ENST00000430682 ARMT1Q9H993 441 aa15.19■□□□□ 0.02
SMPD4-204ENST00000430682 PLXNB2O15031 1838 aa15.18■□□□□ 0.02
SMPD4-204ENST00000430682 POTEFA5A3E0 1075 aa15.18■□□□□ 0.02
SMPD4-204ENST00000430682 CYP2D6P10635 497 aa15.18■□□□□ 0.02
SMPD4-204ENST00000430682 CRACR2BQ8N4Y2 399 aaPredicted RBP15.18■□□□□ 0.02
SMPD4-204ENST00000430682 SDR42E1Q8WUS8 393 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms