RNA–Protein interactions for RNA: ENST00000429927.6

CDKL2-202, Transcript of cyclin dependent kinase like 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDKL2, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL2-202ENST00000429927 USP17L8P0C7I0 530 aa13.25□□□□□ -0.29
CDKL2-202ENST00000429927 SLC5A1P13866 664 aa13.25□□□□□ -0.29
CDKL2-202ENST00000429927 SFPQP23246 707 aaKnown RBP eCLIP13.25□□□□□ -0.29
CDKL2-202ENST00000429927 DNA2P51530 1060 aa13.25□□□□□ -0.29
CDKL2-202ENST00000429927 GYS2P54840 703 aa13.25□□□□□ -0.29
CDKL2-202ENST00000429927 SIK1P57059 783 aa13.25□□□□□ -0.29
CDKL2-202ENST00000429927 FMR1Q06787 632 aaKnown RBP eCLIP13.25□□□□□ -0.29
CDKL2-202ENST00000429927 CPLX2Q6PUV4 134 aaKnown RBP13.25□□□□□ -0.29
CDKL2-202ENST00000429927 NBPF11Q86T75 865 aa13.25□□□□□ -0.29
CDKL2-202ENST00000429927 FAM217BQ9NTX9 383 aaPredicted RBP13.25□□□□□ -0.29
CDKL2-202ENST00000429927 KCNH3Q9ULD8 1083 aa13.25□□□□□ -0.29
CDKL2-202ENST00000429927 PXDNLA1KZ92 1463 aa13.25□□□□□ -0.29
CDKL2-202ENST00000429927 SEC31AO94979 1220 aaKnown RBP13.24□□□□□ -0.29
CDKL2-202ENST00000429927 IL6STP40189 918 aaPredicted RBP13.24□□□□□ -0.29
CDKL2-202ENST00000429927 GRIK5Q16478 980 aa13.24□□□□□ -0.29
CDKL2-202ENST00000429927 TDRD7Q8NHU6 1098 aaKnown RBP13.24□□□□□ -0.29
CDKL2-202ENST00000429927 LY9Q9HBG7 655 aa13.24□□□□□ -0.29
CDKL2-202ENST00000429927 RBAK-RBAKDNI3L0D1 243 aa13.24□□□□□ -0.29
CDKL2-202ENST00000429927 SH2B2O14492 632 aaPredicted RBP13.24□□□□□ -0.29
CDKL2-202ENST00000429927 ENOX2Q16206 610 aaKnown RBP13.24□□□□□ -0.29
CDKL2-202ENST00000429927 ADALQ6DHV7 355 aa13.24□□□□□ -0.29
CDKL2-202ENST00000429927 SECISBP2LQ93073 1101 aaKnown RBP13.24□□□□□ -0.29
CDKL2-202ENST00000429927 ZNF274Q96GC6 653 aaPredicted RBP13.24□□□□□ -0.29
CDKL2-202ENST00000429927 GDAP1L1Q96MZ0 367 aa13.24□□□□□ -0.29
CDKL2-202ENST00000429927 NAA16Q6N069 864 aaPredicted RBP13.24□□□□□ -0.29
CDKL2-202ENST00000429927 PIK3AP1Q6ZUJ8 805 aa13.24□□□□□ -0.29
CDKL2-202ENST00000429927 MARCH10Q8NA82 808 aaPredicted RBP13.24□□□□□ -0.29
CDKL2-202ENST00000429927 ANKRD7Q92527 254 aa13.24□□□□□ -0.29
CDKL2-202ENST00000429927 NOL10Q9BSC4 688 aaKnown RBP13.24□□□□□ -0.29
CDKL2-202ENST00000429927 ANKIB1Q9P2G1 1089 aa13.24□□□□□ -0.29
CDKL2-202ENST00000429927 RSPH14Q9UHP6 348 aa13.24□□□□□ -0.29
CDKL2-202ENST00000429927 RIMBP2O15034 1052 aa13.23□□□□□ -0.29
CDKL2-202ENST00000429927 TEX33O43247 280 aa13.23□□□□□ -0.29
CDKL2-202ENST00000429927 CAPN2P17655 700 aa13.23□□□□□ -0.29
CDKL2-202ENST00000429927 BMP6P22004 513 aa13.23□□□□□ -0.29
CDKL2-202ENST00000429927 PUM3Q15397 648 aaKnown RBP13.23□□□□□ -0.29
CDKL2-202ENST00000429927 AXDND1Q5T1B0 1012 aaPredicted RBP13.23□□□□□ -0.29
CDKL2-202ENST00000429927 IGDCC4Q8TDY8 1250 aa13.23□□□□□ -0.29
CDKL2-202ENST00000429927 CSRNP2Q9H175 543 aa13.23□□□□□ -0.29
CDKL2-202ENST00000429927 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.23□□□□□ -0.29
CDKL2-202ENST00000429927 TNKSO95271 1327 aa13.23□□□□□ -0.29
CDKL2-202ENST00000429927 USP17L3A6NCW0 530 aa13.23□□□□□ -0.29
CDKL2-202ENST00000429927 USP17L4A6NCW7 530 aa13.23□□□□□ -0.29
CDKL2-202ENST00000429927 USP17L1Q7RTZ2 530 aa13.23□□□□□ -0.29
CDKL2-202ENST00000429927 METTL16Q86W50 562 aaKnown RBP13.23□□□□□ -0.29
CDKL2-202ENST00000429927 NEK11Q8NG66 645 aa13.23□□□□□ -0.29
CDKL2-202ENST00000429927 HPS3Q969F9 1004 aa13.23□□□□□ -0.29
CDKL2-202ENST00000429927 NGLY1Q96IV0 654 aa13.23□□□□□ -0.29
CDKL2-202ENST00000429927 ABL1P00519 1130 aa13.23□□□□□ -0.29
CDKL2-202ENST00000429927 HNRNPH2P55795 449 aaKnown RBP13.23□□□□□ -0.29
CDKL2-202ENST00000429927 TSGA10IPQ3SY00 556 aa13.23□□□□□ -0.29
CDKL2-202ENST00000429927 GPATCH11Q8N954 259 aa13.23□□□□□ -0.29
CDKL2-202ENST00000429927 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.23□□□□□ -0.29
CDKL2-202ENST00000429927 VPS16Q9H269 839 aa13.23□□□□□ -0.29
CDKL2-202ENST00000429927 DDX41Q9UJV9 622 aaKnown RBP13.23□□□□□ -0.29
CDKL2-202ENST00000429927 NFE2L3Q9Y4A8 694 aa13.23□□□□□ -0.29
CDKL2-202ENST00000429927 ELP1O95163 1332 aa13.22□□□□□ -0.29
CDKL2-202ENST00000429927 JCADQ9P266 1359 aa13.22□□□□□ -0.29
CDKL2-202ENST00000429927 TOB1P50616 345 aaPredicted RBP13.22□□□□□ -0.29
CDKL2-202ENST00000429927 SAFBQ15424 915 aaKnown RBP eCLIP13.22□□□□□ -0.29
CDKL2-202ENST00000429927 KIF18AQ8NI77 898 aa13.22□□□□□ -0.29
CDKL2-202ENST00000429927 CCDC34Q96HJ3 373 aa13.22□□□□□ -0.29
CDKL2-202ENST00000429927 MCM9Q9NXL9 1143 aa13.22□□□□□ -0.29
CDKL2-202ENST00000429927 PUF60Q9UHX1 559 aaKnown RBP13.22□□□□□ -0.29
CDKL2-202ENST00000429927 TNS3Q68CZ2 1445 aa13.22□□□□□ -0.29
CDKL2-202ENST00000429927 GNPATO15228 680 aa13.22□□□□□ -0.29
CDKL2-202ENST00000429927 AKNAD1Q5T1N1 836 aa13.22□□□□□ -0.29
CDKL2-202ENST00000429927 LPIN2Q92539 896 aa13.22□□□□□ -0.29
CDKL2-202ENST00000429927 SCAF8Q9UPN6 1271 aaKnown RBP13.22□□□□□ -0.29
CDKL2-202ENST00000429927 CCZ1BP86790 482 aa13.21□□□□□ -0.29
CDKL2-202ENST00000429927 CCZ1P86791 482 aaPredicted RBP13.21□□□□□ -0.29
CDKL2-202ENST00000429927 ZNF654Q8IZM8 581 aa13.21□□□□□ -0.29
CDKL2-202ENST00000429927 SHISA4Q96DD7 197 aa13.21□□□□□ -0.29
CDKL2-202ENST00000429927 MXD3Q9BW11 206 aa13.21□□□□□ -0.29
CDKL2-202ENST00000429927 ZCCHC17Q9NP64 241 aaKnown RBP13.21□□□□□ -0.29
CDKL2-202ENST00000429927 RTEL1Q9NZ71 1219 aa13.21□□□□□ -0.29
CDKL2-202ENST00000429927 A0A087X0B3 334 aa13.21□□□□□ -0.29
CDKL2-202ENST00000429927 MAGEB6P1A0A0J9YX57 407 aa13.21□□□□□ -0.29
CDKL2-202ENST00000429927 PICALMQ13492 652 aa13.21□□□□□ -0.29
CDKL2-202ENST00000429927 TEX35Q5T0J7 233 aa13.21□□□□□ -0.29
CDKL2-202ENST00000429927 TBC1D9BQ66K14 1250 aa13.21□□□□□ -0.29
CDKL2-202ENST00000429927 E4F1Q66K89 784 aaPredicted RBP13.21□□□□□ -0.29
CDKL2-202ENST00000429927 MAPKAPK5Q8IW41 473 aa13.21□□□□□ -0.29
CDKL2-202ENST00000429927 CSF1RP07333 972 aa13.21□□□□□ -0.3
CDKL2-202ENST00000429927 TOP1P11387 765 aaKnown RBP13.21□□□□□ -0.3
CDKL2-202ENST00000429927 PPARAQ07869 468 aa13.21□□□□□ -0.3
CDKL2-202ENST00000429927 RAD51AP2Q09MP3 1159 aa13.21□□□□□ -0.3
CDKL2-202ENST00000429927 PTPROQ16827 1216 aa13.21□□□□□ -0.3
CDKL2-202ENST00000429927 TRIM22Q8IYM9 498 aa13.21□□□□□ -0.3
CDKL2-202ENST00000429927 TSPY2A6NKD2 308 aa13.2□□□□□ -0.3
CDKL2-202ENST00000429927 PATL2C9JE40 543 aaKnown RBP13.2□□□□□ -0.3
CDKL2-202ENST00000429927 IFIT1BQ5T764 474 aaKnown RBP13.2□□□□□ -0.3
CDKL2-202ENST00000429927 STAG2Q8N3U4 1231 aa13.2□□□□□ -0.3
CDKL2-202ENST00000429927 SPTLC3Q9NUV7 552 aa13.2□□□□□ -0.3
CDKL2-202ENST00000429927 TAL1P17542 331 aaPredicted RBP13.2□□□□□ -0.3
CDKL2-202ENST00000429927 USP5P45974 858 aa13.2□□□□□ -0.3
CDKL2-202ENST00000429927 CARD6Q9BX69 1037 aa13.2□□□□□ -0.3
CDKL2-202ENST00000429927 NAT10Q9H0A0 1025 aaKnown RBP13.2□□□□□ -0.3
CDKL2-202ENST00000429927 CCDC87Q9NVE4 849 aa13.2□□□□□ -0.3
CDKL2-202ENST00000429927 FAM196BA6NMK8 535 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms