RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 UBXN2AP68543 259 aa18.28■□□□□ 0.52
MSH5-208ENST00000429846 ATP8B2P98198 1209 aa18.28■□□□□ 0.52
MSH5-208ENST00000429846 PRKCZQ05513 592 aa18.28■□□□□ 0.52
MSH5-208ENST00000429846 OS9Q13438 667 aaPredicted RBP18.28■□□□□ 0.52
MSH5-208ENST00000429846 TTC39AQ5SRH9 613 aa18.28■□□□□ 0.52
MSH5-208ENST00000429846 TEX11Q8IYF3 940 aa18.28■□□□□ 0.52
MSH5-208ENST00000429846 SLAIN1Q8ND83 568 aa18.28■□□□□ 0.52
MSH5-208ENST00000429846 ZNF512BQ96KM6 892 aaPredicted RBP18.28■□□□□ 0.52
MSH5-208ENST00000429846 DHX36Q9H2U1 1008 aaKnown RBP18.28■□□□□ 0.52
MSH5-208ENST00000429846 SIPA1L1O43166 1804 aa18.28■□□□□ 0.52
MSH5-208ENST00000429846 SLURP2P0DP57 97 aa18.27■□□□□ 0.52
MSH5-208ENST00000429846 NAA16Q6N069 864 aaPredicted RBP18.27■□□□□ 0.52
MSH5-208ENST00000429846 MYO5AQ9Y4I1 1855 aaKnown RBP18.26■□□□□ 0.51
MSH5-208ENST00000429846 FAM196BA6NMK8 535 aa18.26■□□□□ 0.51
MSH5-208ENST00000429846 SURF6O75683 361 aaKnown RBP18.26■□□□□ 0.51
MSH5-208ENST00000429846 CAP2P40123 477 aa18.26■□□□□ 0.51
MSH5-208ENST00000429846 HNRNPUQ00839 825 aaKnown RBP eCLIP18.26■□□□□ 0.51
MSH5-208ENST00000429846 MTFR1Q15390 333 aa18.26■□□□□ 0.51
MSH5-208ENST00000429846 HABP4Q5JVS0 413 aaKnown RBP18.26■□□□□ 0.51
MSH5-208ENST00000429846 ZNF280CQ8ND82 737 aa18.26■□□□□ 0.51
MSH5-208ENST00000429846 DBNDD2Q9BQY9 259 aa18.26■□□□□ 0.51
MSH5-208ENST00000429846 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.26■□□□□ 0.51
MSH5-208ENST00000429846 PI4KBQ9UBF8 816 aa18.26■□□□□ 0.51
MSH5-208ENST00000429846 NOP58Q9Y2X3 529 aaKnown RBP18.26■□□□□ 0.51
MSH5-208ENST00000429846 GJB1P08034 283 aa18.25■□□□□ 0.51
MSH5-208ENST00000429846 GJA8P48165 433 aa18.25■□□□□ 0.51
MSH5-208ENST00000429846 PABPC4Q13310 644 aaKnown RBP eCLIP18.25■□□□□ 0.51
MSH5-208ENST00000429846 IRF5Q13568 498 aa18.25■□□□□ 0.51
MSH5-208ENST00000429846 FAM110CQ1W6H9 321 aa18.25■□□□□ 0.51
MSH5-208ENST00000429846 ITPRIPQ8IWB1 547 aa18.25■□□□□ 0.51
MSH5-208ENST00000429846 SH3RF3Q8TEJ3 882 aaPredicted RBP18.25■□□□□ 0.51
MSH5-208ENST00000429846 SHISA4Q96DD7 197 aa18.25■□□□□ 0.51
MSH5-208ENST00000429846 AS3MTQ9HBK9 375 aa18.25■□□□□ 0.51
MSH5-208ENST00000429846 AATFQ9NY61 560 aaKnown RBP eCLIP18.25■□□□□ 0.51
MSH5-208ENST00000429846 BIN2Q9UBW5 565 aaPredicted RBP18.25■□□□□ 0.51
MSH5-208ENST00000429846 USP17L5A8MUK1 530 aa18.24■□□□□ 0.51
MSH5-208ENST00000429846 TNPO2O14787 897 aaKnown RBP18.24■□□□□ 0.51
MSH5-208ENST00000429846 CCL5P13501 91 aa18.24■□□□□ 0.51
MSH5-208ENST00000429846 PPP4CP60510 307 aa18.24■□□□□ 0.51
MSH5-208ENST00000429846 CCDC84Q86UT8 332 aaPredicted RBP18.24■□□□□ 0.51
MSH5-208ENST00000429846 PXYLP1Q8TE99 480 aa18.24■□□□□ 0.51
MSH5-208ENST00000429846 SNRKQ9NRH2 765 aa18.24■□□□□ 0.51
MSH5-208ENST00000429846 ADCY3O60266 1144 aa18.23■□□□□ 0.51
MSH5-208ENST00000429846 CYP2E1P05181 493 aaPredicted RBP18.23■□□□□ 0.51
MSH5-208ENST00000429846 CAPN2P17655 700 aa18.23■□□□□ 0.51
MSH5-208ENST00000429846 GCLCP48506 637 aaPredicted RBP18.23■□□□□ 0.51
MSH5-208ENST00000429846 FLT3LGP49771 235 aa18.23■□□□□ 0.51
MSH5-208ENST00000429846 SPP2Q13103 211 aa18.23■□□□□ 0.51
MSH5-208ENST00000429846 SH3D19Q5HYK7 790 aa18.23■□□□□ 0.51
MSH5-208ENST00000429846 TREML2Q5T2D2 321 aa18.23■□□□□ 0.51
MSH5-208ENST00000429846 CERS3Q8IU89 383 aa18.23■□□□□ 0.51
MSH5-208ENST00000429846 ANKRD13CQ8N6S4 541 aa18.23■□□□□ 0.51
MSH5-208ENST00000429846 RNF208Q9H0X6 261 aa18.23■□□□□ 0.51
MSH5-208ENST00000429846 C1orf115Q9H7X2 142 aa18.23■□□□□ 0.51
MSH5-208ENST00000429846 GABRQQ9UN88 632 aa18.23■□□□□ 0.51
MSH5-208ENST00000429846 CEP290O15078 2479 aa18.23■□□□□ 0.51
MSH5-208ENST00000429846 FLT1P17948 1338 aa18.23■□□□□ 0.51
MSH5-208ENST00000429846 DOCK3Q8IZD9 2030 aa18.22■□□□□ 0.51
MSH5-208ENST00000429846 ZBTB7BO15156 539 aaPredicted RBP18.22■□□□□ 0.51
MSH5-208ENST00000429846 ASNSP08243 561 aa18.22■□□□□ 0.51
MSH5-208ENST00000429846 HMGCS2P54868 508 aa18.22■□□□□ 0.51
MSH5-208ENST00000429846 TMED8Q6PL24 325 aaPredicted RBP18.22■□□□□ 0.51
MSH5-208ENST00000429846 COA7Q96BR5 231 aa18.22■□□□□ 0.51
MSH5-208ENST00000429846 GINM1Q9NU53 330 aa18.22■□□□□ 0.51
MSH5-208ENST00000429846 DBNLQ9UJU6 430 aaKnown RBP18.22■□□□□ 0.51
MSH5-208ENST00000429846 ZAP70P43403 619 aa18.21■□□□□ 0.51
MSH5-208ENST00000429846 ADGRA1Q86SQ6 560 aa18.21■□□□□ 0.51
MSH5-208ENST00000429846 METTL16Q86W50 562 aaKnown RBP18.21■□□□□ 0.51
MSH5-208ENST00000429846 FOXP4Q8IVH2 680 aaPredicted RBP18.21■□□□□ 0.51
MSH5-208ENST00000429846 TGFBRAP1Q8WUH2 860 aa18.21■□□□□ 0.51
MSH5-208ENST00000429846 WDR18Q9BV38 432 aa18.21■□□□□ 0.51
MSH5-208ENST00000429846 TRIM34Q9BYJ4 488 aa18.21■□□□□ 0.51
MSH5-208ENST00000429846 MYH1P12882 1939 aa18.21■□□□□ 0.51
MSH5-208ENST00000429846 HLA-DOAP06340 250 aa18.2■□□□□ 0.5
MSH5-208ENST00000429846 RLBP1P12271 317 aa18.2■□□□□ 0.5
MSH5-208ENST00000429846 RRP1BQ14684 758 aaKnown RBP18.2■□□□□ 0.5
MSH5-208ENST00000429846 ERC1Q8IUD2 1116 aa18.2■□□□□ 0.5
MSH5-208ENST00000429846 MAPKAPK5Q8IW41 473 aa18.2■□□□□ 0.5
MSH5-208ENST00000429846 CRACR2BQ8N4Y2 399 aaPredicted RBP18.2■□□□□ 0.5
MSH5-208ENST00000429846 U2AF1L4Q8WU68 220 aaKnown RBP18.2■□□□□ 0.5
MSH5-208ENST00000429846 HTATIP2Q9BUP3 242 aa18.2■□□□□ 0.5
MSH5-208ENST00000429846 ZBED9Q6R2W3 1325 aa18.2■□□□□ 0.5
MSH5-208ENST00000429846 BACE1P56817 501 aa18.19■□□□□ 0.5
MSH5-208ENST00000429846 CEP85Q6P2H3 762 aa18.19■□□□□ 0.5
MSH5-208ENST00000429846 UBE2Q1Q7Z7E8 422 aa18.19■□□□□ 0.5
MSH5-208ENST00000429846 UNC93B1Q9H1C4 597 aa18.19■□□□□ 0.5
MSH5-208ENST00000429846 ASCC2Q9H1I8 757 aaPredicted RBP18.19■□□□□ 0.5
MSH5-208ENST00000429846 DNAJC18Q9H819 358 aa18.19■□□□□ 0.5
MSH5-208ENST00000429846 C19orf81C9J6K1 198 aa18.18■□□□□ 0.5
MSH5-208ENST00000429846 INHAP05111 366 aa18.18■□□□□ 0.5
MSH5-208ENST00000429846 MTMR2Q13614 643 aa18.18■□□□□ 0.5
MSH5-208ENST00000429846 EAF2Q96CJ1 260 aaPredicted RBP18.18■□□□□ 0.5
MSH5-208ENST00000429846 CCDC8Q9H0W5 538 aaPredicted RBP18.18■□□□□ 0.5
MSH5-208ENST00000429846 PIH1D3Q9NQM4 214 aaKnown RBP18.18■□□□□ 0.5
MSH5-208ENST00000429846 TLR7Q9NYK1 1049 aaKnown RBP18.18■□□□□ 0.5
MSH5-208ENST00000429846 TMOD4Q9NZQ9 345 aa18.18■□□□□ 0.5
MSH5-208ENST00000429846 IDH1O75874 414 aaKnown RBP18.17■□□□□ 0.5
MSH5-208ENST00000429846 SGPL1O95470 568 aa18.17■□□□□ 0.5
MSH5-208ENST00000429846 ELNP15502 786 aa18.17■□□□□ 0.5
MSH5-208ENST00000429846 CYP7A1P22680 504 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms