RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 UBAC1Q9BSL1 405 aa14.26□□□□□ -0.13
CDH3-202ENST00000429102 PARP3Q9Y6F1 533 aa14.26□□□□□ -0.13
CDH3-202ENST00000429102 ADD2P35612 726 aa14.25□□□□□ -0.13
CDH3-202ENST00000429102 NOSTRINQ8IVI9 506 aa14.25□□□□□ -0.13
CDH3-202ENST00000429102 IGSF22Q8N9C0 903 aa14.25□□□□□ -0.13
CDH3-202ENST00000429102 RAI14Q9P0K7 980 aa14.25□□□□□ -0.13
CDH3-202ENST00000429102 NALCNQ8IZF0 1738 aa14.25□□□□□ -0.13
CDH3-202ENST00000429102 MRPS25P82663 173 aaKnown RBP14.25□□□□□ -0.13
CDH3-202ENST00000429102 SMC1AQ14683 1233 aaKnown RBP14.25□□□□□ -0.13
CDH3-202ENST00000429102 PTPAQ15257 358 aa14.25□□□□□ -0.13
CDH3-202ENST00000429102 IFNL3Q8IZI9 196 aa14.25□□□□□ -0.13
CDH3-202ENST00000429102 CCDC102AQ96A19 550 aa14.25□□□□□ -0.13
CDH3-202ENST00000429102 V9GY48 417 aaPredicted RBP14.25□□□□□ -0.13
CDH3-202ENST00000429102 ZMYND10O75800 440 aa14.24□□□□□ -0.13
CDH3-202ENST00000429102 RBL2Q08999 1139 aa14.24□□□□□ -0.13
CDH3-202ENST00000429102 SPECC1LQ69YQ0 1117 aa14.24□□□□□ -0.13
CDH3-202ENST00000429102 SMIM5Q71RC9 77 aa14.24□□□□□ -0.13
CDH3-202ENST00000429102 C19orf44Q9H6X5 657 aa14.24□□□□□ -0.13
CDH3-202ENST00000429102 ARFGAP3Q9NP61 516 aa14.24□□□□□ -0.13
CDH3-202ENST00000429102 HSPA2P54652 639 aa14.24□□□□□ -0.13
CDH3-202ENST00000429102 BICDL1Q6ZP65 573 aa14.24□□□□□ -0.13
CDH3-202ENST00000429102 VPS18Q9P253 973 aa14.24□□□□□ -0.13
CDH3-202ENST00000429102 ENC1O14682 589 aa14.24□□□□□ -0.13
CDH3-202ENST00000429102 H2AFXP16104 143 aaPredicted RBP14.24□□□□□ -0.13
CDH3-202ENST00000429102 TOB1P50616 345 aaPredicted RBP14.24□□□□□ -0.13
CDH3-202ENST00000429102 CERS3Q8IU89 383 aa14.24□□□□□ -0.13
CDH3-202ENST00000429102 LCORLQ8N3X6 602 aa14.24□□□□□ -0.13
CDH3-202ENST00000429102 TTLL11Q8NHH1 800 aa14.24□□□□□ -0.13
CDH3-202ENST00000429102 L2HGDHQ9H9P8 463 aa14.24□□□□□ -0.13
CDH3-202ENST00000429102 JCADQ9P266 1359 aa14.24□□□□□ -0.13
CDH3-202ENST00000429102 ARHGAP6O43182 974 aa14.23□□□□□ -0.13
CDH3-202ENST00000429102 CAPZA3Q96KX2 299 aa14.23□□□□□ -0.13
CDH3-202ENST00000429102 LY9Q9HBG7 655 aa14.23□□□□□ -0.13
CDH3-202ENST00000429102 HOOK1Q9UJC3 728 aaKnown RBP14.23□□□□□ -0.13
CDH3-202ENST00000429102 TADA3O75528 432 aa14.23□□□□□ -0.13
CDH3-202ENST00000429102 CASP14P31944 242 aa14.23□□□□□ -0.13
CDH3-202ENST00000429102 RESP18Q5W5W9 173 aa14.23□□□□□ -0.13
CDH3-202ENST00000429102 NUP88Q99567 741 aaPredicted RBP14.23□□□□□ -0.13
CDH3-202ENST00000429102 TACC3Q9Y6A5 838 aa14.23□□□□□ -0.13
CDH3-202ENST00000429102 CACNA1FO60840 1977 aa14.23□□□□□ -0.13
CDH3-202ENST00000429102 ADGRL3Q9HAR2 1447 aa14.23□□□□□ -0.13
CDH3-202ENST00000429102 EARS2Q5JPH6 523 aaKnown RBP14.23□□□□□ -0.13
CDH3-202ENST00000429102 TC2NQ8N9U0 490 aa14.23□□□□□ -0.13
CDH3-202ENST00000429102 IGDCC4Q8TDY8 1250 aa14.23□□□□□ -0.13
CDH3-202ENST00000429102 SLF1Q9BQI6 1058 aa14.23□□□□□ -0.13
CDH3-202ENST00000429102 EPB41L4AQ9HCS5 686 aaPredicted RBP14.23□□□□□ -0.13
CDH3-202ENST00000429102 FAM217BQ9NTX9 383 aaPredicted RBP14.23□□□□□ -0.13
CDH3-202ENST00000429102 TAB2Q9NYJ8 693 aa14.23□□□□□ -0.13
CDH3-202ENST00000429102 CTNND2Q9UQB3 1225 aa14.23□□□□□ -0.13
CDH3-202ENST00000429102 N4BP3O15049 544 aa14.22□□□□□ -0.13
CDH3-202ENST00000429102 CUTAO60888 179 aa14.22□□□□□ -0.13
CDH3-202ENST00000429102 EVX2Q03828 476 aa14.22□□□□□ -0.13
CDH3-202ENST00000429102 C10orf67Q8IYJ2 551 aa14.22□□□□□ -0.13
CDH3-202ENST00000429102 MAP3K14Q99558 947 aa14.22□□□□□ -0.13
CDH3-202ENST00000429102 TOPAZ1Q8N9V7 1692 aa14.22□□□□□ -0.13
CDH3-202ENST00000429102 TULP1O00294 542 aaPredicted RBP14.22□□□□□ -0.13
CDH3-202ENST00000429102 IKBKBO14920 756 aa14.22□□□□□ -0.13
CDH3-202ENST00000429102 N4BP1O75113 896 aaKnown RBP14.22□□□□□ -0.13
CDH3-202ENST00000429102 SART3Q15020 963 aaKnown RBP14.22□□□□□ -0.13
CDH3-202ENST00000429102 CCDC93Q567U6 631 aa14.22□□□□□ -0.13
CDH3-202ENST00000429102 PCMTD1Q96MG8 357 aaPredicted RBP14.22□□□□□ -0.13
CDH3-202ENST00000429102 STRBPQ96SI9 672 aaKnown RBP14.22□□□□□ -0.13
CDH3-202ENST00000429102 GUCA1BQ9UMX6 200 aa14.22□□□□□ -0.13
CDH3-202ENST00000429102 WNT7AO00755 349 aa14.22□□□□□ -0.13
CDH3-202ENST00000429102 MCM7P33993 719 aa14.22□□□□□ -0.13
CDH3-202ENST00000429102 MAP3K12Q12852 859 aa14.22□□□□□ -0.13
CDH3-202ENST00000429102 TRIM34Q9BYJ4 488 aa14.22□□□□□ -0.13
CDH3-202ENST00000429102 PDE11AQ9HCR9 933 aa14.22□□□□□ -0.13
CDH3-202ENST00000429102 ZBTB1Q9Y2K1 713 aa14.22□□□□□ -0.13
CDH3-202ENST00000429102 NCAPD2Q15021 1401 aa14.22□□□□□ -0.13
CDH3-202ENST00000429102 LTN1O94822 1766 aa14.21□□□□□ -0.13
CDH3-202ENST00000429102 FAM170AA1A519 330 aa14.21□□□□□ -0.13
CDH3-202ENST00000429102 CYP7A1P22680 504 aa14.21□□□□□ -0.13
CDH3-202ENST00000429102 DNA2P51530 1060 aa14.21□□□□□ -0.13
CDH3-202ENST00000429102 KCNQ4P56696 695 aa14.21□□□□□ -0.13
CDH3-202ENST00000429102 RASGRF1Q13972 1273 aa14.21□□□□□ -0.13
CDH3-202ENST00000429102 RRAGBQ5VZM2 374 aa14.21□□□□□ -0.13
CDH3-202ENST00000429102 RAD9BQ6WBX8 426 aa14.21□□□□□ -0.13
CDH3-202ENST00000429102 TEX13AQ9BXU3 409 aaPredicted RBP14.21□□□□□ -0.13
CDH3-202ENST00000429102 TRIM10Q9UDY6 481 aa14.21□□□□□ -0.13
CDH3-202ENST00000429102 AKR1B15C9JRZ8 316 aaPredicted RBP14.21□□□□□ -0.13
CDH3-202ENST00000429102 CCP110O43303 1012 aa14.21□□□□□ -0.13
CDH3-202ENST00000429102 IRX5P78411 483 aaPredicted RBP14.21□□□□□ -0.13
CDH3-202ENST00000429102 UIMC1Q96RL1 719 aa14.21□□□□□ -0.13
CDH3-202ENST00000429102 TUBE1Q9UJT0 475 aa14.21□□□□□ -0.13
CDH3-202ENST00000429102 LRRC37A3O60309 1634 aa14.21□□□□□ -0.13
CDH3-202ENST00000429102 NMT2O60551 498 aa14.21□□□□□ -0.14
CDH3-202ENST00000429102 CD44P16070 742 aaKnown RBP14.21□□□□□ -0.14
CDH3-202ENST00000429102 SPATA5Q8NB90 893 aa14.21□□□□□ -0.14
CDH3-202ENST00000429102 RGS22Q8NE09 1264 aa14.21□□□□□ -0.14
CDH3-202ENST00000429102 ACSBG1Q96GR2 724 aa14.21□□□□□ -0.14
CDH3-202ENST00000429102 DRC1Q96MC2 740 aa14.21□□□□□ -0.14
CDH3-202ENST00000429102 GPR108Q9NPR9 543 aa14.21□□□□□ -0.14
CDH3-202ENST00000429102 KIF5CO60282 957 aa14.2□□□□□ -0.14
CDH3-202ENST00000429102 PDE8BO95263 885 aa14.2□□□□□ -0.14
CDH3-202ENST00000429102 CHMP4BP1P59074 171 aa14.2□□□□□ -0.14
CDH3-202ENST00000429102 FAM47AQ5JRC9 791 aa14.2□□□□□ -0.14
CDH3-202ENST00000429102 CC2D1AQ6P1N0 951 aaPredicted RBP14.2□□□□□ -0.14
CDH3-202ENST00000429102 A0A087X0B3 334 aa14.2□□□□□ -0.14
CDH3-202ENST00000429102 PLEKHA8P1O95397 391 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms