RNA–Protein interactions for RNA: ENST00000428895.1

BX088651.4-202, humanhuman

TSL 1 (best) BASIC

Gene BX088651.4, Length 1,479 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BX088651.4-202ENST00000428895 COL2A1P02458 1487 aaPredicted RBP15.47■□□□□ 0.07
BX088651.4-202ENST00000428895 MCMDC2Q4G0Z9 681 aa15.47■□□□□ 0.07
BX088651.4-202ENST00000428895 BMP2KLQ5H9B9 411 aa15.47■□□□□ 0.07
BX088651.4-202ENST00000428895 HOOK2Q96ED9 719 aa15.47■□□□□ 0.07
BX088651.4-202ENST00000428895 DCP1AQ9NPI6 582 aaPredicted RBP15.47■□□□□ 0.07
BX088651.4-202ENST00000428895 ATP8A2Q9NTI2 1148 aa15.47■□□□□ 0.07
BX088651.4-202ENST00000428895 UBE2Q2LH0YL09 131 aa15.46■□□□□ 0.07
BX088651.4-202ENST00000428895 APPP05067 770 aa15.46■□□□□ 0.07
BX088651.4-202ENST00000428895 SLURP2P0DP57 97 aa15.46■□□□□ 0.07
BX088651.4-202ENST00000428895 LBX1P52954 281 aa15.46■□□□□ 0.07
BX088651.4-202ENST00000428895 MAP3K11Q16584 847 aa15.46■□□□□ 0.07
BX088651.4-202ENST00000428895 LDLRAD1Q5T700 205 aa15.46■□□□□ 0.07
BX088651.4-202ENST00000428895 ARMC9Q7Z3E5 817 aa15.46■□□□□ 0.07
BX088651.4-202ENST00000428895 DDRGK1Q96HY6 314 aa15.46■□□□□ 0.07
BX088651.4-202ENST00000428895 DHX36Q9H2U1 1008 aaKnown RBP15.46■□□□□ 0.07
BX088651.4-202ENST00000428895 MCM9Q9NXL9 1143 aa15.46■□□□□ 0.07
BX088651.4-202ENST00000428895 ATAD5Q96QE3 1844 aa15.46■□□□□ 0.07
BX088651.4-202ENST00000428895 USP2O75604 605 aaPredicted RBP15.46■□□□□ 0.06
BX088651.4-202ENST00000428895 POLR3DP05423 398 aaPredicted RBP15.46■□□□□ 0.06
BX088651.4-202ENST00000428895 GNAT2P19087 354 aa15.46■□□□□ 0.06
BX088651.4-202ENST00000428895 KIF23Q02241 960 aaPredicted RBP15.46■□□□□ 0.06
BX088651.4-202ENST00000428895 DCAF15Q66K64 600 aa15.46■□□□□ 0.06
BX088651.4-202ENST00000428895 ZNF589Q86UQ0 364 aaPredicted RBP15.46■□□□□ 0.06
BX088651.4-202ENST00000428895 REM2Q8IYK8 340 aaPredicted RBP15.46■□□□□ 0.06
BX088651.4-202ENST00000428895 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.46■□□□□ 0.06
BX088651.4-202ENST00000428895 PI4KBQ9UBF8 816 aa15.46■□□□□ 0.06
BX088651.4-202ENST00000428895 FAM196BA6NMK8 535 aa15.45■□□□□ 0.06
BX088651.4-202ENST00000428895 GSG1L2A8MUP6 293 aa15.45■□□□□ 0.06
BX088651.4-202ENST00000428895 HLA-DOAP06340 250 aa15.45■□□□□ 0.06
BX088651.4-202ENST00000428895 CHMLP26374 656 aa15.45■□□□□ 0.06
BX088651.4-202ENST00000428895 IREB2P48200 963 aaKnown RBP15.45■□□□□ 0.06
BX088651.4-202ENST00000428895 PATL2C9JE40 543 aaKnown RBP15.44■□□□□ 0.06
BX088651.4-202ENST00000428895 USP17L12C9JPN9 530 aa15.44■□□□□ 0.06
BX088651.4-202ENST00000428895 USP17L21D6R901 530 aa15.44■□□□□ 0.06
BX088651.4-202ENST00000428895 TDO2P48775 406 aa15.44■□□□□ 0.06
BX088651.4-202ENST00000428895 PLCD1P51178 756 aa15.44■□□□□ 0.06
BX088651.4-202ENST00000428895 VPS53Q5VIR6 699 aa15.44■□□□□ 0.06
BX088651.4-202ENST00000428895 CRACR2BQ8N4Y2 399 aaPredicted RBP15.44■□□□□ 0.06
BX088651.4-202ENST00000428895 WRNIP1Q96S55 665 aa15.44■□□□□ 0.06
BX088651.4-202ENST00000428895 ZNF341Q9BYN7 854 aa15.44■□□□□ 0.06
BX088651.4-202ENST00000428895 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.44■□□□□ 0.06
BX088651.4-202ENST00000428895 CCDC171Q6TFL3 1326 aa15.44■□□□□ 0.06
BX088651.4-202ENST00000428895 CASP8AP2Q9UKL3 1982 aa15.44■□□□□ 0.06
BX088651.4-202ENST00000428895 CYP2D7A0A087X1C5 515 aa15.43■□□□□ 0.06
BX088651.4-202ENST00000428895 UNCXA6NJT0 531 aa15.43■□□□□ 0.06
BX088651.4-202ENST00000428895 CYP2D6P10635 497 aa15.43■□□□□ 0.06
BX088651.4-202ENST00000428895 MFAP1P55081 439 aaKnown RBP15.43■□□□□ 0.06
BX088651.4-202ENST00000428895 EVX2Q03828 476 aa15.43■□□□□ 0.06
BX088651.4-202ENST00000428895 TTC6Q86TZ1 520 aa15.43■□□□□ 0.06
BX088651.4-202ENST00000428895 AMOTL1Q8IY63 956 aa15.43■□□□□ 0.06
BX088651.4-202ENST00000428895 IFNL3Q8IZI9 196 aa15.43■□□□□ 0.06
BX088651.4-202ENST00000428895 TRIM34Q9BYJ4 488 aa15.43■□□□□ 0.06
BX088651.4-202ENST00000428895 NACAP1Q9BZK3 213 aa15.43■□□□□ 0.06
BX088651.4-202ENST00000428895 EPB41L4AQ9HCS5 686 aaPredicted RBP15.43■□□□□ 0.06
BX088651.4-202ENST00000428895 SAGE1Q9NXZ1 904 aa15.43■□□□□ 0.06
BX088651.4-202ENST00000428895 DOCK1Q14185 1865 aa15.42■□□□□ 0.06
BX088651.4-202ENST00000428895 GIMAP6Q6P9H5 292 aa15.42■□□□□ 0.06
BX088651.4-202ENST00000428895 CTR9Q6PD62 1173 aa15.42■□□□□ 0.06
BX088651.4-202ENST00000428895 FOXP4Q8IVH2 680 aaPredicted RBP15.42■□□□□ 0.06
BX088651.4-202ENST00000428895 RUFY2Q8WXA3 655 aa15.42■□□□□ 0.06
BX088651.4-202ENST00000428895 CLMNQ96JQ2 1002 aa15.42■□□□□ 0.06
BX088651.4-202ENST00000428895 IL25Q9H293 177 aa15.42■□□□□ 0.06
BX088651.4-202ENST00000428895 MINDY4BA8MYZ0 360 aa15.41■□□□□ 0.06
BX088651.4-202ENST00000428895 FOXP2O15409 715 aa15.41■□□□□ 0.06
BX088651.4-202ENST00000428895 TBC1D12O60347 775 aa15.41■□□□□ 0.06
BX088651.4-202ENST00000428895 HSPD1P10809 573 aaKnown RBP15.41■□□□□ 0.06
BX088651.4-202ENST00000428895 INPP5BP32019 993 aa15.41■□□□□ 0.06
BX088651.4-202ENST00000428895 MAP3K10Q02779 954 aa15.41■□□□□ 0.06
BX088651.4-202ENST00000428895 ANKRD13AQ8IZ07 590 aa15.41■□□□□ 0.06
BX088651.4-202ENST00000428895 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.41■□□□□ 0.06
BX088651.4-202ENST00000428895 ZKSCAN4Q969J2 545 aaPredicted RBP15.41■□□□□ 0.06
BX088651.4-202ENST00000428895 NAPBQ9H115 298 aa15.41■□□□□ 0.06
BX088651.4-202ENST00000428895 ARPP21Q9UBL0 812 aaPredicted RBP15.41■□□□□ 0.06
BX088651.4-202ENST00000428895 HERC5Q9UII4 1024 aaKnown RBP15.41■□□□□ 0.06
BX088651.4-202ENST00000428895 SERPINB13Q9UIV8 391 aa15.41■□□□□ 0.06
BX088651.4-202ENST00000428895 SMIM22K7EJ46 135 aa15.4■□□□□ 0.06
BX088651.4-202ENST00000428895 MAP3K9P80192 1104 aa15.4■□□□□ 0.06
BX088651.4-202ENST00000428895 VGLL4Q14135 290 aa15.4■□□□□ 0.06
BX088651.4-202ENST00000428895 C12orf60Q5U649 245 aa15.4■□□□□ 0.06
BX088651.4-202ENST00000428895 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.4■□□□□ 0.06
BX088651.4-202ENST00000428895 DNAJC18Q9H819 358 aa15.4■□□□□ 0.06
BX088651.4-202ENST00000428895 TSKSQ9UJT2 592 aa15.4■□□□□ 0.06
BX088651.4-202ENST00000428895 ZNF112Q9UJU3 913 aa15.4■□□□□ 0.06
BX088651.4-202ENST00000428895 RAD50Q92878 1312 aa15.4■□□□□ 0.06
BX088651.4-202ENST00000428895 PHF20L1A8MW92 1017 aa15.4■□□□□ 0.06
BX088651.4-202ENST00000428895 METTL16Q86W50 562 aaKnown RBP15.4■□□□□ 0.06
BX088651.4-202ENST00000428895 STK11IPQ8N1F8 1099 aa15.4■□□□□ 0.06
BX088651.4-202ENST00000428895 SLC10A4Q96EP9 437 aa15.4■□□□□ 0.06
BX088651.4-202ENST00000428895 DYNLL2Q96FJ2 89 aa15.4■□□□□ 0.06
BX088651.4-202ENST00000428895 EHD4Q9H223 541 aa15.4■□□□□ 0.06
BX088651.4-202ENST00000428895 ELP3Q9H9T3 547 aa15.4■□□□□ 0.06
BX088651.4-202ENST00000428895 RNF186Q9NXI6 227 aa15.4■□□□□ 0.06
BX088651.4-202ENST00000428895 CSADQ9Y600 493 aa15.4■□□□□ 0.06
BX088651.4-202ENST00000428895 LAMA4Q16363 1823 aa15.39■□□□□ 0.05
BX088651.4-202ENST00000428895 PHIPQ8WWQ0 1821 aa15.39■□□□□ 0.05
BX088651.4-202ENST00000428895 SGSM2O43147 1006 aa15.39■□□□□ 0.05
BX088651.4-202ENST00000428895 CDC45O75419 566 aa15.39■□□□□ 0.05
BX088651.4-202ENST00000428895 FGAP02671 866 aa15.39■□□□□ 0.05
BX088651.4-202ENST00000428895 SBK1Q52WX2 424 aa15.39■□□□□ 0.05
BX088651.4-202ENST00000428895 SPRYD7Q5W111 196 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms