RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 TBC1D2Q9BYX2 928 aa8.33□□□□□ -1.08
CNOT4-206ENST00000428680 AP5M1Q9H0R1 490 aa8.33□□□□□ -1.08
CNOT4-206ENST00000428680 RBM19Q9Y4C8 960 aaKnown RBP8.33□□□□□ -1.08
CNOT4-206ENST00000428680 PHACTR2O75167 634 aa8.32□□□□□ -1.08
CNOT4-206ENST00000428680 MAGEB6Q8N7X4 407 aa8.32□□□□□ -1.08
CNOT4-206ENST00000428680 C22orf23Q9BZE7 217 aa8.32□□□□□ -1.08
CNOT4-206ENST00000428680 CNNM2Q9H8M5 875 aa8.32□□□□□ -1.08
CNOT4-206ENST00000428680 HOMER2Q9NSB8 354 aa8.32□□□□□ -1.08
CNOT4-206ENST00000428680 XDHP47989 1333 aa8.32□□□□□ -1.08
CNOT4-206ENST00000428680 ZBTB22O15209 634 aa8.32□□□□□ -1.08
CNOT4-206ENST00000428680 CALM1P0DP23 149 aa8.32□□□□□ -1.08
CNOT4-206ENST00000428680 CALM2P0DP24 149 aa8.32□□□□□ -1.08
CNOT4-206ENST00000428680 CALM3P0DP25 149 aa8.32□□□□□ -1.08
CNOT4-206ENST00000428680 SCNN1DP51172 638 aa8.32□□□□□ -1.08
CNOT4-206ENST00000428680 NCAPG2Q86XI2 1143 aa8.32□□□□□ -1.08
CNOT4-206ENST00000428680 EVI5LQ96CN4 794 aa8.32□□□□□ -1.08
CNOT4-206ENST00000428680 DEF6Q9H4E7 631 aa8.32□□□□□ -1.08
CNOT4-206ENST00000428680 CLRN2A0PK11 232 aa8.32□□□□□ -1.08
CNOT4-206ENST00000428680 NR1I2O75469 434 aa8.32□□□□□ -1.08
CNOT4-206ENST00000428680 NAPAP54920 295 aa8.32□□□□□ -1.08
CNOT4-206ENST00000428680 HEATR3Q7Z4Q2 680 aa8.32□□□□□ -1.08
CNOT4-206ENST00000428680 USP37Q86T82 979 aa8.32□□□□□ -1.08
CNOT4-206ENST00000428680 ZNF354CQ86Y25 554 aa8.32□□□□□ -1.08
CNOT4-206ENST00000428680 ANKRD35Q8N283 1001 aa8.32□□□□□ -1.08
CNOT4-206ENST00000428680 NCOA7Q8NI08 942 aa8.32□□□□□ -1.08
CNOT4-206ENST00000428680 MTIF3Q9H2K0 278 aaKnown RBP8.32□□□□□ -1.08
CNOT4-206ENST00000428680 ZBTB21Q9ULJ3 1066 aa8.32□□□□□ -1.08
CNOT4-206ENST00000428680 WDR33Q9C0J8 1336 aaKnown RBP8.32□□□□□ -1.08
CNOT4-206ENST00000428680 PCCAP05165 728 aaPredicted RBP8.31□□□□□ -1.08
CNOT4-206ENST00000428680 UBA7P41226 1012 aa8.31□□□□□ -1.08
CNOT4-206ENST00000428680 SLC1A4P43007 532 aa8.31□□□□□ -1.08
CNOT4-206ENST00000428680 FCHSD1Q86WN1 690 aa8.31□□□□□ -1.08
CNOT4-206ENST00000428680 DNAJC5GQ8N7S2 189 aa8.31□□□□□ -1.08
CNOT4-206ENST00000428680 RNF169Q8NCN4 708 aa8.31□□□□□ -1.08
CNOT4-206ENST00000428680 DBNDD1Q9H9R9 158 aa8.31□□□□□ -1.08
CNOT4-206ENST00000428680 ANGEL1Q9UNK9 670 aaKnown RBP8.31□□□□□ -1.08
CNOT4-206ENST00000428680 STX6O43752 255 aa8.31□□□□□ -1.08
CNOT4-206ENST00000428680 TAF5LO75529 589 aa8.31□□□□□ -1.08
CNOT4-206ENST00000428680 C7orf43Q8WVR3 580 aa8.31□□□□□ -1.08
CNOT4-206ENST00000428680 COA7Q96BR5 231 aa8.31□□□□□ -1.08
CNOT4-206ENST00000428680 PNMA3Q9UL41 463 aa8.31□□□□□ -1.08
CNOT4-206ENST00000428680 FANCIQ9NVI1 1328 aa8.31□□□□□ -1.08
CNOT4-206ENST00000428680 MYCLP12524 364 aaPredicted RBP8.31□□□□□ -1.08
CNOT4-206ENST00000428680 KRT26Q7Z3Y9 468 aa8.31□□□□□ -1.08
CNOT4-206ENST00000428680 ZSCAN31Q96LW9 406 aaPredicted RBP8.31□□□□□ -1.08
CNOT4-206ENST00000428680 DACH1Q9UI36 760 aa8.31□□□□□ -1.08
CNOT4-206ENST00000428680 SUGT1Q9Y2Z0 365 aa8.31□□□□□ -1.08
CNOT4-206ENST00000428680 RAD50Q92878 1312 aa8.31□□□□□ -1.08
CNOT4-206ENST00000428680 CHD1LQ86WJ1 897 aa8.31□□□□□ -1.08
CNOT4-206ENST00000428680 CCDC144CPQ8IYA2 1237 aa8.31□□□□□ -1.08
CNOT4-206ENST00000428680 RRP36Q96EU6 259 aaKnown RBP8.31□□□□□ -1.08
CNOT4-206ENST00000428680 TSG101Q99816 390 aa8.31□□□□□ -1.08
CNOT4-206ENST00000428680 GOPCQ9HD26 462 aa8.31□□□□□ -1.08
CNOT4-206ENST00000428680 GPRC5DQ9NZD1 345 aa8.31□□□□□ -1.08
CNOT4-206ENST00000428680 PUF60Q9UHX1 559 aaKnown RBP8.31□□□□□ -1.08
CNOT4-206ENST00000428680 RASSF7Q02833 373 aa8.3□□□□□ -1.08
CNOT4-206ENST00000428680 NBPF15Q8N660 670 aa8.3□□□□□ -1.08
CNOT4-206ENST00000428680 FAM212AQ96EL1 285 aa8.3□□□□□ -1.08
CNOT4-206ENST00000428680 IMPG2Q9BZV3 1241 aa8.3□□□□□ -1.08
CNOT4-206ENST00000428680 COA1Q9GZY4 146 aa8.3□□□□□ -1.08
CNOT4-206ENST00000428680 PRC1O43663 620 aa8.3□□□□□ -1.08
CNOT4-206ENST00000428680 SMARCE1Q969G3 411 aa8.3□□□□□ -1.08
CNOT4-206ENST00000428680 C8orf76Q96K31 380 aa8.3□□□□□ -1.08
CNOT4-206ENST00000428680 CIZ1Q9ULV3 898 aaPredicted RBP8.3□□□□□ -1.08
CNOT4-206ENST00000428680 MED23Q9ULK4 1368 aa8.3□□□□□ -1.08
CNOT4-206ENST00000428680 DDX11L8A8MPP1 907 aa8.3□□□□□ -1.08
CNOT4-206ENST00000428680 SMARCA5O60264 1052 aaPredicted RBP8.3□□□□□ -1.08
CNOT4-206ENST00000428680 ZEB2O60315 1214 aa8.3□□□□□ -1.08
CNOT4-206ENST00000428680 NTSR2O95665 410 aa8.3□□□□□ -1.08
CNOT4-206ENST00000428680 ABI1Q8IZP0 508 aa8.3□□□□□ -1.08
CNOT4-206ENST00000428680 CHURC1Q8WUH1 139 aa8.3□□□□□ -1.08
CNOT4-206ENST00000428680 GLG1Q92896 1179 aa8.3□□□□□ -1.08
CNOT4-206ENST00000428680 PKD2L1Q9P0L9 805 aa8.3□□□□□ -1.08
CNOT4-206ENST00000428680 LRRC37AA6NMS7 1700 aa8.3□□□□□ -1.08
CNOT4-206ENST00000428680 PABPN1LA6NDY0 278 aaKnown RBP8.3□□□□□ -1.08
CNOT4-206ENST00000428680 CASTP20810 708 aaKnown RBP8.3□□□□□ -1.08
CNOT4-206ENST00000428680 DNM2P50570 870 aa8.3□□□□□ -1.08
CNOT4-206ENST00000428680 HSP90AA2PQ14568 343 aaPredicted RBP8.3□□□□□ -1.08
CNOT4-206ENST00000428680 C15orf52Q6ZUT6 534 aaKnown RBP8.3□□□□□ -1.08
CNOT4-206ENST00000428680 ZBTB38Q8NAP3 1195 aaPredicted RBP8.3□□□□□ -1.08
CNOT4-206ENST00000428680 RAET1EQ8TD07 263 aa8.3□□□□□ -1.08
CNOT4-206ENST00000428680 CFHR5Q9BXR6 569 aa8.3□□□□□ -1.08
CNOT4-206ENST00000428680 WBP1LQ9NX94 342 aa8.3□□□□□ -1.08
CNOT4-206ENST00000428680 MYH14Q7Z406 1995 aaKnown RBP8.29□□□□□ -1.08
CNOT4-206ENST00000428680 ANAPC15P60006 121 aa8.29□□□□□ -1.08
CNOT4-206ENST00000428680 RABEP1Q15276 862 aa8.29□□□□□ -1.08
CNOT4-206ENST00000428680 TCERG1LQ5VWI1 586 aa8.29□□□□□ -1.08
CNOT4-206ENST00000428680 COMMD10Q9Y6G5 202 aa8.29□□□□□ -1.08
CNOT4-206ENST00000428680 TRPM7Q96QT4 1865 aa8.29□□□□□ -1.08
CNOT4-206ENST00000428680 PAPPA2Q9BXP8 1791 aa8.29□□□□□ -1.08
CNOT4-206ENST00000428680 MANSC4A6NHS7 340 aaPredicted RBP8.29□□□□□ -1.08
CNOT4-206ENST00000428680 EYA2O00167 538 aa8.29□□□□□ -1.08
CNOT4-206ENST00000428680 CHL1O00533 1208 aa8.29□□□□□ -1.08
CNOT4-206ENST00000428680 FIBPO43427 364 aa8.29□□□□□ -1.08
CNOT4-206ENST00000428680 KCNA4P22459 653 aa8.29□□□□□ -1.08
CNOT4-206ENST00000428680 ELMSAN1Q6PJG2 1045 aa8.29□□□□□ -1.08
CNOT4-206ENST00000428680 FAM193BQ96PV7 902 aaPredicted RBP8.29□□□□□ -1.08
CNOT4-206ENST00000428680 NACA2Q9H009 215 aa8.29□□□□□ -1.08
CNOT4-206ENST00000428680 USP16Q9Y5T5 823 aa8.29□□□□□ -1.08
CNOT4-206ENST00000428680 ADAMTSL1Q8N6G6 1762 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms