RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 METTL16Q86W50 562 aaKnown RBP20.2■□□□□ 0.82
VRK2-204ENST00000428021 SCYL3Q8IZE3 742 aa20.2■□□□□ 0.82
VRK2-204ENST00000428021 CFHR5Q9BXR6 569 aa20.2■□□□□ 0.82
VRK2-204ENST00000428021 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.2■□□□□ 0.82
VRK2-204ENST00000428021 R3HDMLQ9H3Y0 253 aa20.2■□□□□ 0.82
VRK2-204ENST00000428021 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.2■□□□□ 0.82
VRK2-204ENST00000428021 MX1P20591 662 aa20.19■□□□□ 0.82
VRK2-204ENST00000428021 USP5P45974 858 aa20.19■□□□□ 0.82
VRK2-204ENST00000428021 UBE3CQ15386 1083 aa20.19■□□□□ 0.82
VRK2-204ENST00000428021 LCORLQ8N3X6 602 aa20.19■□□□□ 0.82
VRK2-204ENST00000428021 KBTBD3Q8NAB2 608 aa20.19■□□□□ 0.82
VRK2-204ENST00000428021 HERC5Q9UII4 1024 aaKnown RBP20.19■□□□□ 0.82
VRK2-204ENST00000428021 DOCK1Q14185 1865 aa20.18■□□□□ 0.82
VRK2-204ENST00000428021 CCL15-CCL14A0A0B4J2E2 113 aa20.18■□□□□ 0.82
VRK2-204ENST00000428021 GLRX3O76003 335 aaKnown RBP20.18■□□□□ 0.82
VRK2-204ENST00000428021 ALDH1A1P00352 501 aa20.18■□□□□ 0.82
VRK2-204ENST00000428021 CCL15Q16663 113 aa20.18■□□□□ 0.82
VRK2-204ENST00000428021 FOXP4Q8IVH2 680 aaPredicted RBP20.18■□□□□ 0.82
VRK2-204ENST00000428021 DNAJC18Q9H819 358 aa20.18■□□□□ 0.82
VRK2-204ENST00000428021 STAP2Q9UGK3 403 aa20.18■□□□□ 0.82
VRK2-204ENST00000428021 KCNH4Q9UQ05 1017 aa20.18■□□□□ 0.82
VRK2-204ENST00000428021 DDX60LQ5H9U9 1706 aaKnown RBP20.17■□□□□ 0.82
VRK2-204ENST00000428021 ERC2O15083 957 aa20.17■□□□□ 0.82
VRK2-204ENST00000428021 PTPRAP18433 802 aa20.17■□□□□ 0.82
VRK2-204ENST00000428021 SNAPC2Q13487 334 aa20.17■□□□□ 0.82
VRK2-204ENST00000428021 CRNKL1Q9BZJ0 848 aaKnown RBP20.17■□□□□ 0.82
VRK2-204ENST00000428021 ARMT1Q9H993 441 aa20.17■□□□□ 0.82
VRK2-204ENST00000428021 PICK1Q9NRD5 415 aa20.17■□□□□ 0.82
VRK2-204ENST00000428021 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.17■□□□□ 0.82
VRK2-204ENST00000428021 ZBTB47Q9UFB7 747 aaPredicted RBP20.17■□□□□ 0.82
VRK2-204ENST00000428021 PHIPQ8WWQ0 1821 aa20.17■□□□□ 0.82
VRK2-204ENST00000428021 MBD4O95243 580 aa20.16■□□□□ 0.82
VRK2-204ENST00000428021 CETPP11597 493 aa20.16■□□□□ 0.82
VRK2-204ENST00000428021 SLC4A8Q2Y0W8 1093 aa20.16■□□□□ 0.82
VRK2-204ENST00000428021 ZSCAN25Q6NSZ9 544 aa20.16■□□□□ 0.82
VRK2-204ENST00000428021 TNS4Q8IZW8 715 aa20.16■□□□□ 0.82
VRK2-204ENST00000428021 LNPKQ9C0E8 428 aa20.16■□□□□ 0.82
VRK2-204ENST00000428021 PUS7LQ9H0K6 701 aaKnown RBP20.16■□□□□ 0.82
VRK2-204ENST00000428021 PRKAB2O43741 272 aa20.15■□□□□ 0.82
VRK2-204ENST00000428021 CAP2P40123 477 aa20.15■□□□□ 0.82
VRK2-204ENST00000428021 PDE1AP54750 535 aa20.15■□□□□ 0.82
VRK2-204ENST00000428021 MOGSQ13724 837 aa20.15■□□□□ 0.82
VRK2-204ENST00000428021 NOM1Q5C9Z4 860 aaKnown RBP20.15■□□□□ 0.82
VRK2-204ENST00000428021 OTUD7BQ6GQQ9 843 aa20.15■□□□□ 0.82
VRK2-204ENST00000428021 B4GALNT3Q6L9W6 998 aa20.15■□□□□ 0.82
VRK2-204ENST00000428021 FAM43AQ8N2R8 423 aa20.15■□□□□ 0.82
VRK2-204ENST00000428021 SDR42E1Q8WUS8 393 aa20.15■□□□□ 0.82
VRK2-204ENST00000428021 AFG3L2Q9Y4W6 797 aa20.15■□□□□ 0.82
VRK2-204ENST00000428021 ZHX2Q9Y6X8 837 aa20.15■□□□□ 0.82
VRK2-204ENST00000428021 ATAD5Q96QE3 1844 aa20.15■□□□□ 0.82
VRK2-204ENST00000428021 NAV1Q8NEY1 1877 aa20.15■□□□□ 0.82
VRK2-204ENST00000428021 GPR25O00155 361 aa20.14■□□□□ 0.81
VRK2-204ENST00000428021 CXCL11O14625 94 aa20.14■□□□□ 0.81
VRK2-204ENST00000428021 HLA-DOAP06340 250 aa20.14■□□□□ 0.81
VRK2-204ENST00000428021 JAG1P78504 1218 aa20.14■□□□□ 0.81
VRK2-204ENST00000428021 NUCB1Q02818 461 aa20.14■□□□□ 0.81
VRK2-204ENST00000428021 CCDC84Q86UT8 332 aaPredicted RBP20.14■□□□□ 0.81
VRK2-204ENST00000428021 DCP1AQ9NPI6 582 aaPredicted RBP20.14■□□□□ 0.81
VRK2-204ENST00000428021 BTBD19C9JJ37 291 aa20.13■□□□□ 0.81
VRK2-204ENST00000428021 RNF113AO15541 343 aaKnown RBP20.13■□□□□ 0.81
VRK2-204ENST00000428021 PLCD1P51178 756 aa20.13■□□□□ 0.81
VRK2-204ENST00000428021 EVX2Q03828 476 aa20.13■□□□□ 0.81
VRK2-204ENST00000428021 CRHR2Q13324 411 aa20.13■□□□□ 0.81
VRK2-204ENST00000428021 CHD1LQ86WJ1 897 aa20.13■□□□□ 0.81
VRK2-204ENST00000428021 CRACR2BQ8N4Y2 399 aaPredicted RBP20.13■□□□□ 0.81
VRK2-204ENST00000428021 ZNF296Q8WUU4 475 aaPredicted RBP20.13■□□□□ 0.81
VRK2-204ENST00000428021 OSBP2Q969R2 916 aa20.13■□□□□ 0.81
VRK2-204ENST00000428021 EHD4Q9H223 541 aa20.13■□□□□ 0.81
VRK2-204ENST00000428021 PTPRFP10586 1907 aa20.12■□□□□ 0.81
VRK2-204ENST00000428021 SHROOM1Q2M3G4 852 aaPredicted RBP20.12■□□□□ 0.81
VRK2-204ENST00000428021 TTC6Q86TZ1 520 aa20.12■□□□□ 0.81
VRK2-204ENST00000428021 MCM9Q9NXL9 1143 aa20.12■□□□□ 0.81
VRK2-204ENST00000428021 SERPINB13Q9UIV8 391 aa20.12■□□□□ 0.81
VRK2-204ENST00000428021 ZFYP08048 801 aaPredicted RBP20.11■□□□□ 0.81
VRK2-204ENST00000428021 TATDN1Q6P1N9 297 aa20.11■□□□□ 0.81
VRK2-204ENST00000428021 APPBP2Q92624 585 aa20.11■□□□□ 0.81
VRK2-204ENST00000428021 STRBPQ96SI9 672 aaKnown RBP20.11■□□□□ 0.81
VRK2-204ENST00000428021 ZCCHC17Q9NP64 241 aaKnown RBP20.11■□□□□ 0.81
VRK2-204ENST00000428021 ATP8A2Q9NTI2 1148 aa20.11■□□□□ 0.81
VRK2-204ENST00000428021 BAZ2AQ9UIF9 1905 aaKnown RBP20.11■□□□□ 0.81
VRK2-204ENST00000428021 A0A0G2JLL6 359 aaPredicted RBP20.1■□□□□ 0.81
VRK2-204ENST00000428021 POLR3DP05423 398 aaPredicted RBP20.1■□□□□ 0.81
VRK2-204ENST00000428021 CYP2D6P10635 497 aa20.1■□□□□ 0.81
VRK2-204ENST00000428021 GABPAQ06546 454 aa20.1■□□□□ 0.81
VRK2-204ENST00000428021 GPAT2Q6NUI2 795 aa20.1■□□□□ 0.81
VRK2-204ENST00000428021 PRRT2Q7Z6L0 340 aaPredicted RBP20.1■□□□□ 0.81
VRK2-204ENST00000428021 TRIM34Q9BYJ4 488 aa20.1■□□□□ 0.81
VRK2-204ENST00000428021 TRIM75PA6NK02 468 aa20.09■□□□□ 0.81
VRK2-204ENST00000428021 GDF11O95390 407 aa20.09■□□□□ 0.81
VRK2-204ENST00000428021 TAF1CQ15572 869 aaPredicted RBP20.09■□□□□ 0.81
VRK2-204ENST00000428021 ANKRD23Q86SG2 305 aa20.09■□□□□ 0.81
VRK2-204ENST00000428021 PLEKHM2Q8IWE5 1019 aa20.09■□□□□ 0.81
VRK2-204ENST00000428021 FSD1Q9BTV5 496 aa20.09■□□□□ 0.81
VRK2-204ENST00000428021 SLC4A4Q9Y6R1 1079 aa20.09■□□□□ 0.81
VRK2-204ENST00000428021 USP17L5A8MUK1 530 aa20.08■□□□□ 0.81
VRK2-204ENST00000428021 SMIM22K7EJ46 135 aa20.08■□□□□ 0.81
VRK2-204ENST00000428021 M0R2C6 588 aa20.08■□□□□ 0.81
VRK2-204ENST00000428021 FKTNO75072 461 aa20.08■□□□□ 0.81
VRK2-204ENST00000428021 ASNSP08243 561 aa20.08■□□□□ 0.81
VRK2-204ENST00000428021 SHMT1P34896 483 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms