RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 LEO1Q8WVC0 666 aaPredicted RBP6.39□□□□□ -1.39
HERC4-206ENST00000427635 N4BP2L2Q92802 583 aaPredicted RBP6.39□□□□□ -1.39
HERC4-206ENST00000427635 TEKT1Q969V4 418 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 TRIM56Q9BRZ2 755 aaKnown RBP6.39□□□□□ -1.39
HERC4-206ENST00000427635 CHPF2Q9P2E5 772 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 CCPG1Q9ULG6 757 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 LIMCH1Q9UPQ0 1083 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 PTPREP23469 700 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 DTHD1Q6ZMT9 781 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 COPS6Q7L5N1 327 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 PANK2Q9BZ23 570 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 ZSCAN16Q9H4T2 348 aaPredicted RBP6.39□□□□□ -1.39
HERC4-206ENST00000427635 SFMBT1Q9UHJ3 866 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 XPOTO43592 962 aaKnown RBP6.39□□□□□ -1.39
HERC4-206ENST00000427635 URI1O94763 535 aaPredicted RBP6.39□□□□□ -1.39
HERC4-206ENST00000427635 FMNL1O95466 1100 aaPredicted RBP6.39□□□□□ -1.39
HERC4-206ENST00000427635 RARSP54136 660 aaKnown RBP6.39□□□□□ -1.39
HERC4-206ENST00000427635 FBXW4P57775 412 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 PPFIA1Q13136 1202 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 PTPN14Q15678 1187 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 CLUL1Q15846 466 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 GIMAP6Q6P9H5 292 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 TAOK1Q7L7X3 1001 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 MIGA1Q8NAN2 632 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 TSPYL2Q9H2G4 693 aaPredicted RBP6.39□□□□□ -1.39
HERC4-206ENST00000427635 TMX1Q9H3N1 280 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 TPCN1Q9ULQ1 816 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 CAPN9O14815 690 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 SCP2P22307 547 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 GSDMDP57764 484 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 MCCD1P59942 119 aaPredicted RBP6.39□□□□□ -1.39
HERC4-206ENST00000427635 LMBR1LQ6UX01 489 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 SV2BQ7L1I2 683 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 TBC1D22AQ8WUA7 517 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 CHURC1Q8WUH1 139 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 DCAF5Q96JK2 942 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 TTLL3Q9Y4R7 772 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 DPYSL4O14531 572 aa6.38□□□□□ -1.39
HERC4-206ENST00000427635 SLC12A2P55011 1212 aa6.38□□□□□ -1.39
HERC4-206ENST00000427635 SPAG1Q07617 926 aa6.38□□□□□ -1.39
HERC4-206ENST00000427635 TCP10Q12799 353 aa6.38□□□□□ -1.39
HERC4-206ENST00000427635 PTPROQ16827 1216 aa6.38□□□□□ -1.39
HERC4-206ENST00000427635 DEPTORQ8TB45 409 aa6.38□□□□□ -1.39
HERC4-206ENST00000427635 PPP2R3CQ969Q6 453 aa6.38□□□□□ -1.39
HERC4-206ENST00000427635 IPO11Q9UI26 975 aaKnown RBP6.38□□□□□ -1.39
HERC4-206ENST00000427635 WDR17Q8IZU2 1322 aa6.38□□□□□ -1.39
HERC4-206ENST00000427635 PI4KAP2A4QPH2 592 aa6.38□□□□□ -1.39
HERC4-206ENST00000427635 NFKBIAP25963 317 aa6.38□□□□□ -1.39
HERC4-206ENST00000427635 IFRD2Q12894 506 aaPredicted RBP6.38□□□□□ -1.39
HERC4-206ENST00000427635 MCMDC2Q4G0Z9 681 aa6.38□□□□□ -1.39
HERC4-206ENST00000427635 PALM2Q8IXS6 379 aa6.38□□□□□ -1.39
HERC4-206ENST00000427635 GPR161Q8N6U8 529 aaKnown RBP6.38□□□□□ -1.39
HERC4-206ENST00000427635 PI4KAP1Q8N8J0 262 aa6.38□□□□□ -1.39
HERC4-206ENST00000427635 DDX19AQ9NUU7 478 aaKnown RBP6.38□□□□□ -1.39
HERC4-206ENST00000427635 SWAP70Q9UH65 585 aa6.38□□□□□ -1.39
HERC4-206ENST00000427635 EMILIN1Q9Y6C2 1016 aa6.38□□□□□ -1.39
HERC4-206ENST00000427635 NCOA1Q15788 1441 aa6.38□□□□□ -1.39
HERC4-206ENST00000427635 MCM7P33993 719 aa6.38□□□□□ -1.39
HERC4-206ENST00000427635 SYKP43405 635 aa6.38□□□□□ -1.39
HERC4-206ENST00000427635 PPP2R5DQ14738 602 aa6.38□□□□□ -1.39
HERC4-206ENST00000427635 ZKSCAN8Q15776 578 aaPredicted RBP6.38□□□□□ -1.39
HERC4-206ENST00000427635 BBS5Q8N3I7 341 aa6.38□□□□□ -1.39
HERC4-206ENST00000427635 CHMP6Q96FZ7 201 aa6.38□□□□□ -1.39
HERC4-206ENST00000427635 HINFPQ9BQA5 517 aa6.38□□□□□ -1.39
HERC4-206ENST00000427635 FAM107BQ9H098 131 aa6.38□□□□□ -1.39
HERC4-206ENST00000427635 CLSTN2Q9H4D0 955 aa6.38□□□□□ -1.39
HERC4-206ENST00000427635 NSD2O96028 1365 aa6.38□□□□□ -1.39
HERC4-206ENST00000427635 TNNC2P02585 160 aa6.38□□□□□ -1.39
HERC4-206ENST00000427635 IREB2P48200 963 aaKnown RBP6.38□□□□□ -1.39
HERC4-206ENST00000427635 KCTD2Q14681 263 aa6.38□□□□□ -1.39
HERC4-206ENST00000427635 ANKRD35Q8N283 1001 aa6.38□□□□□ -1.39
HERC4-206ENST00000427635 SKA2Q8WVK7 121 aaPredicted RBP6.38□□□□□ -1.39
HERC4-206ENST00000427635 THUMPD2Q9BTF0 503 aaKnown RBP6.38□□□□□ -1.39
HERC4-206ENST00000427635 MTIF3Q9H2K0 278 aaKnown RBP6.38□□□□□ -1.39
HERC4-206ENST00000427635 TACC1O75410 805 aa6.38□□□□□ -1.39
HERC4-206ENST00000427635 CDR2Q01850 454 aa6.38□□□□□ -1.39
HERC4-206ENST00000427635 NCAPH2Q6IBW4 605 aa6.38□□□□□ -1.39
HERC4-206ENST00000427635 PDZD4Q76G19 769 aaPredicted RBP6.38□□□□□ -1.39
HERC4-206ENST00000427635 NUCKS1Q9H1E3 243 aaKnown RBP6.38□□□□□ -1.39
HERC4-206ENST00000427635 PAG1Q9NWQ8 432 aa6.38□□□□□ -1.39
HERC4-206ENST00000427635 MAGI1Q96QZ7 1491 aaPredicted RBP6.38□□□□□ -1.39
HERC4-206ENST00000427635 TESPA1A2RU30 521 aaPredicted RBP6.37□□□□□ -1.39
HERC4-206ENST00000427635 SPDYE2BA6NHP3 402 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 TLR3O15455 904 aaKnown RBP6.37□□□□□ -1.39
HERC4-206ENST00000427635 SPDYE6P0CI01 402 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 SLC39A6Q13433 755 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 TSTA3Q13630 321 aaPredicted RBP6.37□□□□□ -1.39
HERC4-206ENST00000427635 UAP1Q16222 522 aaPredicted RBP6.37□□□□□ -1.39
HERC4-206ENST00000427635 USH1GQ495M9 461 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 TMC6Q7Z403 805 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 SESTD1Q86VW0 696 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 YAF2Q8IY57 180 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 ATP6V1E2Q96A05 226 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 MTRF1LQ9UGC7 380 aaKnown RBP6.37□□□□□ -1.39
HERC4-206ENST00000427635 SLC12A6Q9UHW9 1150 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 A6NJR5 290 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 PPP1R2P41236 205 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 PSMD2Q13200 908 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 C9orf131Q5VYM1 1079 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 TSPAN18Q96SJ8 248 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms