RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 DLEC1Q9Y238 1755 aa16.25■□□□□ 0.19
APOBEC3D-202ENST00000427494 CCDC196A0A1B0GTZ2 297 aa16.24■□□□□ 0.19
APOBEC3D-202ENST00000427494 A0A1W2PQ27 194 aa16.24■□□□□ 0.19
APOBEC3D-202ENST00000427494 A0A1W2PQ64 194 aa16.24■□□□□ 0.19
APOBEC3D-202ENST00000427494 A0A1W2PQD8 194 aa16.24■□□□□ 0.19
APOBEC3D-202ENST00000427494 USP17L12C9JPN9 530 aa16.24■□□□□ 0.19
APOBEC3D-202ENST00000427494 USP17L21D6R901 530 aa16.24■□□□□ 0.19
APOBEC3D-202ENST00000427494 UBE2Q2LH0YL09 131 aa16.24■□□□□ 0.19
APOBEC3D-202ENST00000427494 ZBTB22O15209 634 aa16.24■□□□□ 0.19
APOBEC3D-202ENST00000427494 TRIM37O94972 964 aa16.24■□□□□ 0.19
APOBEC3D-202ENST00000427494 PLCB2Q00722 1185 aa16.24■□□□□ 0.19
APOBEC3D-202ENST00000427494 ADALQ6DHV7 355 aa16.24■□□□□ 0.19
APOBEC3D-202ENST00000427494 TRIM22Q8IYM9 498 aa16.24■□□□□ 0.19
APOBEC3D-202ENST00000427494 ENGASEQ8NFI3 743 aa16.24■□□□□ 0.19
APOBEC3D-202ENST00000427494 ZSCAN10Q96SZ4 725 aaPredicted RBP16.24■□□□□ 0.19
APOBEC3D-202ENST00000427494 PRDM1O75626 825 aa16.24■□□□□ 0.19
APOBEC3D-202ENST00000427494 TMED8Q6PL24 325 aaPredicted RBP16.24■□□□□ 0.19
APOBEC3D-202ENST00000427494 ZNF804AQ7Z570 1209 aa16.24■□□□□ 0.19
APOBEC3D-202ENST00000427494 FANCBQ8NB91 859 aa16.24■□□□□ 0.19
APOBEC3D-202ENST00000427494 DCP1AQ9NPI6 582 aaPredicted RBP16.24■□□□□ 0.19
APOBEC3D-202ENST00000427494 PCP11498 1178 aaKnown RBP16.23■□□□□ 0.19
APOBEC3D-202ENST00000427494 WDR66Q8TBY9 1149 aa16.23■□□□□ 0.19
APOBEC3D-202ENST00000427494 GPR101Q96P66 508 aaPredicted RBP16.23■□□□□ 0.19
APOBEC3D-202ENST00000427494 ATP8A2Q9NTI2 1148 aa16.23■□□□□ 0.19
APOBEC3D-202ENST00000427494 MYH6P13533 1939 aa16.23■□□□□ 0.19
APOBEC3D-202ENST00000427494 LDHBP07195 334 aaKnown RBP16.22■□□□□ 0.19
APOBEC3D-202ENST00000427494 FGRP09769 529 aa16.22■□□□□ 0.19
APOBEC3D-202ENST00000427494 GUCY1A2P33402 732 aa16.22■□□□□ 0.19
APOBEC3D-202ENST00000427494 GPSM2P81274 684 aa16.22■□□□□ 0.19
APOBEC3D-202ENST00000427494 CRY2Q49AN0 593 aa16.22■□□□□ 0.19
APOBEC3D-202ENST00000427494 NBPF11Q86T75 865 aa16.22■□□□□ 0.19
APOBEC3D-202ENST00000427494 CMTR1Q8N1G2 835 aaKnown RBP16.22■□□□□ 0.19
APOBEC3D-202ENST00000427494 CCDC82Q8N4S0 544 aa16.22■□□□□ 0.19
APOBEC3D-202ENST00000427494 ENAHQ8N8S7 591 aaPredicted RBP16.22■□□□□ 0.19
APOBEC3D-202ENST00000427494 TDRD7Q8NHU6 1098 aaKnown RBP16.22■□□□□ 0.19
APOBEC3D-202ENST00000427494 RBM17Q96I25 401 aaKnown RBP16.22■□□□□ 0.19
APOBEC3D-202ENST00000427494 CBX8Q9HC52 389 aa16.22■□□□□ 0.19
APOBEC3D-202ENST00000427494 A0A1B0GVL5 298 aa16.22■□□□□ 0.19
APOBEC3D-202ENST00000427494 U2AF2P26368 475 aaKnown RBP eCLIP16.22■□□□□ 0.19
APOBEC3D-202ENST00000427494 IFIT1BQ5T764 474 aaKnown RBP16.22■□□□□ 0.19
APOBEC3D-202ENST00000427494 LUZP1Q86V48 1076 aa16.22■□□□□ 0.19
APOBEC3D-202ENST00000427494 IQCA1Q86XH1 822 aa16.22■□□□□ 0.19
APOBEC3D-202ENST00000427494 FMR1NBQ8N0W7 255 aaPredicted RBP16.22■□□□□ 0.19
APOBEC3D-202ENST00000427494 CRACR2BQ8N4Y2 399 aaPredicted RBP16.22■□□□□ 0.19
APOBEC3D-202ENST00000427494 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.22■□□□□ 0.19
APOBEC3D-202ENST00000427494 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.22■□□□□ 0.19
APOBEC3D-202ENST00000427494 ARPP21Q9UBL0 812 aaPredicted RBP16.22■□□□□ 0.19
APOBEC3D-202ENST00000427494 ZKSCAN5Q9Y2L8 839 aa16.22■□□□□ 0.19
APOBEC3D-202ENST00000427494 UFL1O94874 794 aa16.21■□□□□ 0.19
APOBEC3D-202ENST00000427494 DEXIO95424 95 aa16.21■□□□□ 0.19
APOBEC3D-202ENST00000427494 SLC3A2P08195 630 aaKnown RBP16.21■□□□□ 0.19
APOBEC3D-202ENST00000427494 CYP2D6P10635 497 aa16.21■□□□□ 0.19
APOBEC3D-202ENST00000427494 EVX2Q03828 476 aa16.21■□□□□ 0.19
APOBEC3D-202ENST00000427494 SLC39A14Q15043 492 aa16.21■□□□□ 0.19
APOBEC3D-202ENST00000427494 C15orf52Q6ZUT6 534 aaKnown RBP16.21■□□□□ 0.19
APOBEC3D-202ENST00000427494 CATIPQ7Z7H3 387 aa16.21■□□□□ 0.19
APOBEC3D-202ENST00000427494 DNAJC25Q9H1X3 360 aa16.21■□□□□ 0.19
APOBEC3D-202ENST00000427494 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.21■□□□□ 0.19
APOBEC3D-202ENST00000427494 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.2■□□□□ 0.18
APOBEC3D-202ENST00000427494 AP5Z1O43299 807 aa16.2■□□□□ 0.18
APOBEC3D-202ENST00000427494 MMP1P03956 469 aa16.2■□□□□ 0.18
APOBEC3D-202ENST00000427494 NDUFA8P51970 172 aa16.2■□□□□ 0.18
APOBEC3D-202ENST00000427494 DDR1Q08345 913 aa16.2■□□□□ 0.18
APOBEC3D-202ENST00000427494 SAFBQ15424 915 aaKnown RBP eCLIP16.2■□□□□ 0.18
APOBEC3D-202ENST00000427494 ORC4O43929 436 aa16.2■□□□□ 0.18
APOBEC3D-202ENST00000427494 GSTO1P78417 241 aa16.2■□□□□ 0.18
APOBEC3D-202ENST00000427494 PPP2R5BQ15173 497 aa16.2■□□□□ 0.18
APOBEC3D-202ENST00000427494 SBK1Q52WX2 424 aa16.2■□□□□ 0.18
APOBEC3D-202ENST00000427494 KCNJ14Q9UNX9 436 aa16.2■□□□□ 0.18
APOBEC3D-202ENST00000427494 ATP2B4P23634 1241 aa16.19■□□□□ 0.18
APOBEC3D-202ENST00000427494 MARCKSP29966 332 aaPredicted RBP16.19■□□□□ 0.18
APOBEC3D-202ENST00000427494 ZNF165P49910 485 aa16.19■□□□□ 0.18
APOBEC3D-202ENST00000427494 STX1AQ16623 288 aa16.19■□□□□ 0.18
APOBEC3D-202ENST00000427494 GGA1Q9UJY5 639 aa16.19■□□□□ 0.18
APOBEC3D-202ENST00000427494 NAV1Q8NEY1 1877 aa16.19■□□□□ 0.18
APOBEC3D-202ENST00000427494 POLRMTO00411 1230 aaKnown RBP16.18■□□□□ 0.18
APOBEC3D-202ENST00000427494 IGSF3O75054 1194 aa16.18■□□□□ 0.18
APOBEC3D-202ENST00000427494 CAVIN2O95810 425 aa16.18■□□□□ 0.18
APOBEC3D-202ENST00000427494 USP5P45974 858 aa16.18■□□□□ 0.18
APOBEC3D-202ENST00000427494 PDE4BQ07343 736 aa16.18■□□□□ 0.18
APOBEC3D-202ENST00000427494 TXNRD1Q16881 649 aa16.18■□□□□ 0.18
APOBEC3D-202ENST00000427494 AXDND1Q5T1B0 1012 aaPredicted RBP16.18■□□□□ 0.18
APOBEC3D-202ENST00000427494 NOSTRINQ8IVI9 506 aa16.18■□□□□ 0.18
APOBEC3D-202ENST00000427494 DIS3L2Q8IYB7 885 aaKnown RBP16.18■□□□□ 0.18
APOBEC3D-202ENST00000427494 MAP3K14Q99558 947 aa16.18■□□□□ 0.18
APOBEC3D-202ENST00000427494 MCM9Q9NXL9 1143 aa16.18■□□□□ 0.18
APOBEC3D-202ENST00000427494 BTBD18B2RXH4 712 aa16.18■□□□□ 0.18
APOBEC3D-202ENST00000427494 WDHD1O75717 1129 aaPredicted RBP16.18■□□□□ 0.18
APOBEC3D-202ENST00000427494 USP17L8P0C7I0 530 aa16.18■□□□□ 0.18
APOBEC3D-202ENST00000427494 CALM1P0DP23 149 aa16.18■□□□□ 0.18
APOBEC3D-202ENST00000427494 CALM2P0DP24 149 aa16.18■□□□□ 0.18
APOBEC3D-202ENST00000427494 CALM3P0DP25 149 aa16.18■□□□□ 0.18
APOBEC3D-202ENST00000427494 AKAP17AQ02040 695 aaKnown RBP16.18■□□□□ 0.18
APOBEC3D-202ENST00000427494 PTPAQ15257 358 aa16.18■□□□□ 0.18
APOBEC3D-202ENST00000427494 GRIK5Q16478 980 aa16.18■□□□□ 0.18
APOBEC3D-202ENST00000427494 SLC4A8Q2Y0W8 1093 aa16.18■□□□□ 0.18
APOBEC3D-202ENST00000427494 FAM47AQ5JRC9 791 aa16.18■□□□□ 0.18
APOBEC3D-202ENST00000427494 MPNDQ8N594 471 aa16.18■□□□□ 0.18
APOBEC3D-202ENST00000427494 JMYQ8N9B5 988 aa16.18■□□□□ 0.18
APOBEC3D-202ENST00000427494 SH3RF3Q8TEJ3 882 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms