RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 ECM29Q5VYK3 1845 aa9.95□□□□□ -0.82
SH3D19-204ENST00000427414 ELP1O95163 1332 aa9.94□□□□□ -0.82
SH3D19-204ENST00000427414 LARGE1O95461 756 aa9.94□□□□□ -0.82
SH3D19-204ENST00000427414 KLRK1P26718 216 aa9.94□□□□□ -0.82
SH3D19-204ENST00000427414 SLFNL1Q499Z3 407 aa9.94□□□□□ -0.82
SH3D19-204ENST00000427414 TBC1D10CQ8IV04 446 aa9.94□□□□□ -0.82
SH3D19-204ENST00000427414 C17orf53Q8N3J3 647 aaPredicted RBP9.94□□□□□ -0.82
SH3D19-204ENST00000427414 ERICH2A1L162 156 aa9.94□□□□□ -0.82
SH3D19-204ENST00000427414 CPA1P15085 419 aa9.94□□□□□ -0.82
SH3D19-204ENST00000427414 PDE4BQ07343 736 aa9.94□□□□□ -0.82
SH3D19-204ENST00000427414 SCRN1Q12765 414 aa9.94□□□□□ -0.82
SH3D19-204ENST00000427414 STRIP1Q5VSL9 837 aa9.94□□□□□ -0.82
SH3D19-204ENST00000427414 NSUN7Q8NE18 718 aaKnown RBP9.94□□□□□ -0.82
SH3D19-204ENST00000427414 WASF1Q92558 559 aa9.94□□□□□ -0.82
SH3D19-204ENST00000427414 DCP1AQ9NPI6 582 aaPredicted RBP9.94□□□□□ -0.82
SH3D19-204ENST00000427414 MTMR6Q9Y217 621 aa9.94□□□□□ -0.82
SH3D19-204ENST00000427414 SLX4Q8IY92 1834 aa9.93□□□□□ -0.82
SH3D19-204ENST00000427414 GADD45BO75293 160 aaPredicted RBP9.93□□□□□ -0.82
SH3D19-204ENST00000427414 GTF2F1P35269 517 aaKnown RBP eCLIP9.93□□□□□ -0.82
SH3D19-204ENST00000427414 TPRNQ4KMQ1 711 aa9.93□□□□□ -0.82
SH3D19-204ENST00000427414 LARP1BQ659C4 914 aaKnown RBP9.93□□□□□ -0.82
SH3D19-204ENST00000427414 CTR9Q6PD62 1173 aa9.93□□□□□ -0.82
SH3D19-204ENST00000427414 SYNE3Q6ZMZ3 975 aa9.93□□□□□ -0.82
SH3D19-204ENST00000427414 ADGRA1Q86SQ6 560 aa9.93□□□□□ -0.82
SH3D19-204ENST00000427414 FAM184AQ8NB25 1140 aa9.93□□□□□ -0.82
SH3D19-204ENST00000427414 ADCY5O95622 1261 aa9.93□□□□□ -0.82
SH3D19-204ENST00000427414 UVSSAQ2YD98 709 aa9.93□□□□□ -0.82
SH3D19-204ENST00000427414 LY9Q9HBG7 655 aa9.93□□□□□ -0.82
SH3D19-204ENST00000427414 BRCA1P38398 1863 aaKnown RBP9.93□□□□□ -0.82
SH3D19-204ENST00000427414 C6orf229H3BNL8 230 aa9.92□□□□□ -0.82
SH3D19-204ENST00000427414 DDAH1O94760 285 aa9.92□□□□□ -0.82
SH3D19-204ENST00000427414 PRDX5P30044 214 aa9.92□□□□□ -0.82
SH3D19-204ENST00000427414 C12orf60Q5U649 245 aa9.92□□□□□ -0.82
SH3D19-204ENST00000427414 CCDC24Q8N4L8 307 aa9.92□□□□□ -0.82
SH3D19-204ENST00000427414 RBM28Q9NW13 759 aaKnown RBP9.92□□□□□ -0.82
SH3D19-204ENST00000427414 MORC2Q9Y6X9 1032 aaPredicted RBP9.92□□□□□ -0.82
SH3D19-204ENST00000427414 PLIN4Q96Q06 1357 aa9.92□□□□□ -0.82
SH3D19-204ENST00000427414 PLCB2Q00722 1185 aa9.92□□□□□ -0.82
SH3D19-204ENST00000427414 USP48Q86UV5 1035 aa9.92□□□□□ -0.82
SH3D19-204ENST00000427414 IQCA1Q86XH1 822 aa9.92□□□□□ -0.82
SH3D19-204ENST00000427414 GTPBP4Q9BZE4 634 aaKnown RBP9.92□□□□□ -0.82
SH3D19-204ENST00000427414 ZSWIM5Q9P217 1185 aa9.92□□□□□ -0.82
SH3D19-204ENST00000427414 HPS5Q9UPZ3 1129 aa9.92□□□□□ -0.82
SH3D19-204ENST00000427414 NEDD4P46934 1319 aa9.92□□□□□ -0.82
SH3D19-204ENST00000427414 NOVP48745 357 aa9.91□□□□□ -0.82
SH3D19-204ENST00000427414 APOBRQ0VD83 1088 aa9.91□□□□□ -0.82
SH3D19-204ENST00000427414 SEC23AQ15436 765 aa9.91□□□□□ -0.82
SH3D19-204ENST00000427414 APOA5Q6Q788 366 aa9.91□□□□□ -0.82
SH3D19-204ENST00000427414 DGKHQ86XP1 1220 aa9.91□□□□□ -0.82
SH3D19-204ENST00000427414 SCAND2PQ9GZW5 306 aaPredicted RBP9.91□□□□□ -0.82
SH3D19-204ENST00000427414 KLF18A0A0U1RQI7 1052 aa9.91□□□□□ -0.82
SH3D19-204ENST00000427414 SPDYE4A6NLX3 237 aa9.91□□□□□ -0.82
SH3D19-204ENST00000427414 CHAF1AQ13111 956 aaPredicted RBP9.91□□□□□ -0.82
SH3D19-204ENST00000427414 WTAPQ15007 396 aa9.91□□□□□ -0.82
SH3D19-204ENST00000427414 CCDC93Q567U6 631 aa9.91□□□□□ -0.82
SH3D19-204ENST00000427414 TMEM67Q5HYA8 995 aa9.91□□□□□ -0.82
SH3D19-204ENST00000427414 MFSD14BQ5SR56 506 aa9.91□□□□□ -0.82
SH3D19-204ENST00000427414 CYB5R4Q7L1T6 521 aa9.91□□□□□ -0.82
SH3D19-204ENST00000427414 TTLL6Q8N841 843 aa9.91□□□□□ -0.82
SH3D19-204ENST00000427414 MTFR1LQ9H019 292 aa9.91□□□□□ -0.82
SH3D19-204ENST00000427414 CCDC69A6NI79 296 aa9.9□□□□□ -0.82
SH3D19-204ENST00000427414 ZBTB43O43298 467 aa9.9□□□□□ -0.82
SH3D19-204ENST00000427414 PRKAB2O43741 272 aa9.9□□□□□ -0.82
SH3D19-204ENST00000427414 LETM1O95202 739 aaPredicted RBP9.9□□□□□ -0.82
SH3D19-204ENST00000427414 IFNAR1P17181 557 aa9.9□□□□□ -0.82
SH3D19-204ENST00000427414 SMARCA1P28370 1054 aa9.9□□□□□ -0.82
SH3D19-204ENST00000427414 HAND2P61296 217 aa9.9□□□□□ -0.82
SH3D19-204ENST00000427414 PDCL2Q8N4E4 241 aa9.9□□□□□ -0.82
SH3D19-204ENST00000427414 MIGA1Q8NAN2 632 aa9.9□□□□□ -0.82
SH3D19-204ENST00000427414 ZDHHC15Q96MV8 337 aa9.9□□□□□ -0.82
SH3D19-204ENST00000427414 SWAP70Q9UH65 585 aa9.9□□□□□ -0.82
SH3D19-204ENST00000427414 SERPINA10Q9UK55 444 aa9.9□□□□□ -0.82
SH3D19-204ENST00000427414 CFAP45Q9UL16 551 aa9.9□□□□□ -0.82
SH3D19-204ENST00000427414 MYH1P12882 1939 aa9.9□□□□□ -0.82
SH3D19-204ENST00000427414 BAZ2AQ9UIF9 1905 aaKnown RBP9.9□□□□□ -0.82
SH3D19-204ENST00000427414 PTPDC1A2A3K4 754 aa9.9□□□□□ -0.82
SH3D19-204ENST00000427414 WTIPA6NIX2 430 aaPredicted RBP9.9□□□□□ -0.82
SH3D19-204ENST00000427414 B4E1Z4 1266 aa9.9□□□□□ -0.82
SH3D19-204ENST00000427414 IFIT3O14879 490 aaKnown RBP9.9□□□□□ -0.82
SH3D19-204ENST00000427414 KIF20AO95235 890 aa9.9□□□□□ -0.82
SH3D19-204ENST00000427414 CTDNEP1O95476 244 aa9.9□□□□□ -0.82
SH3D19-204ENST00000427414 METAP2P50579 478 aaKnown RBP eCLIP9.9□□□□□ -0.82
SH3D19-204ENST00000427414 BRAPQ7Z569 592 aa9.9□□□□□ -0.82
SH3D19-204ENST00000427414 NECAB1Q8N987 351 aa9.9□□□□□ -0.82
SH3D19-204ENST00000427414 ZSCAN10Q96SZ4 725 aaPredicted RBP9.9□□□□□ -0.82
SH3D19-204ENST00000427414 UBAC1Q9BSL1 405 aa9.9□□□□□ -0.82
SH3D19-204ENST00000427414 EHD4Q9H223 541 aa9.9□□□□□ -0.82
SH3D19-204ENST00000427414 IQSEC3Q9UPP2 1182 aaPredicted RBP9.9□□□□□ -0.82
SH3D19-204ENST00000427414 SLC12A7Q9Y666 1083 aa9.9□□□□□ -0.82
SH3D19-204ENST00000427414 LTBP3Q9NS15 1303 aa9.9□□□□□ -0.82
SH3D19-204ENST00000427414 RHBDL3P58872 404 aa9.89□□□□□ -0.83
SH3D19-204ENST00000427414 DYNLL1P63167 89 aaKnown RBP9.89□□□□□ -0.83
SH3D19-204ENST00000427414 KRT85P78386 507 aa9.89□□□□□ -0.83
SH3D19-204ENST00000427414 ILDR1Q86SU0 546 aaPredicted RBP9.89□□□□□ -0.83
SH3D19-204ENST00000427414 SPTLC3Q9NUV7 552 aa9.89□□□□□ -0.83
SH3D19-204ENST00000427414 AATFQ9NY61 560 aaKnown RBP eCLIP9.89□□□□□ -0.83
SH3D19-204ENST00000427414 CD2APQ9Y5K6 639 aa9.89□□□□□ -0.83
SH3D19-204ENST00000427414 GOLGA8BA8MQT2 603 aa9.89□□□□□ -0.83
SH3D19-204ENST00000427414 USP17L12C9JPN9 530 aa9.89□□□□□ -0.83
SH3D19-204ENST00000427414 USP17L21D6R901 530 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms