RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 BRD3Q15059 726 aa8.52□□□□□ -1.05
LINC01108-201ENST00000427276 SLC9C2Q5TAH2 1124 aa8.52□□□□□ -1.05
LINC01108-201ENST00000427276 TTC19Q6DKK2 380 aaPredicted RBP8.52□□□□□ -1.05
LINC01108-201ENST00000427276 NUTM2AQ8IVF1 878 aaPredicted RBP8.52□□□□□ -1.05
LINC01108-201ENST00000427276 GSPT2Q8IYD1 628 aaKnown RBP8.52□□□□□ -1.05
LINC01108-201ENST00000427276 PRDM16Q9HAZ2 1276 aa8.52□□□□□ -1.05
LINC01108-201ENST00000427276 KCND1Q9NSA2 647 aa8.52□□□□□ -1.05
LINC01108-201ENST00000427276 DACH1Q9UI36 760 aa8.52□□□□□ -1.05
LINC01108-201ENST00000427276 CDC23Q9UJX2 597 aa8.52□□□□□ -1.05
LINC01108-201ENST00000427276 SALL1Q9NSC2 1324 aa8.52□□□□□ -1.05
LINC01108-201ENST00000427276 CDKL5O76039 1030 aa8.52□□□□□ -1.05
LINC01108-201ENST00000427276 MATR3P43243 847 aaKnown RBP eCLIP8.52□□□□□ -1.05
LINC01108-201ENST00000427276 KCNJ6P48051 423 aa8.52□□□□□ -1.05
LINC01108-201ENST00000427276 ANTXR2P58335 489 aa8.52□□□□□ -1.05
LINC01108-201ENST00000427276 SSRP1Q08945 709 aaKnown RBP8.52□□□□□ -1.05
LINC01108-201ENST00000427276 NR5A1Q13285 461 aa8.52□□□□□ -1.05
LINC01108-201ENST00000427276 SCARF1Q14162 830 aa8.52□□□□□ -1.05
LINC01108-201ENST00000427276 RSRC2Q7L4I2 434 aaKnown RBP8.52□□□□□ -1.05
LINC01108-201ENST00000427276 RASSF8Q8NHQ8 419 aa8.52□□□□□ -1.05
LINC01108-201ENST00000427276 SMARCC1Q92922 1105 aaPredicted RBP8.52□□□□□ -1.05
LINC01108-201ENST00000427276 ACBD3Q9H3P7 528 aa8.52□□□□□ -1.05
LINC01108-201ENST00000427276 TFR2Q9UP52 801 aa8.52□□□□□ -1.05
LINC01108-201ENST00000427276 A0A0G2JS52 829 aa8.51□□□□□ -1.05
LINC01108-201ENST00000427276 CLSTN1O94985 981 aa8.51□□□□□ -1.05
LINC01108-201ENST00000427276 MUM1L1Q5H9M0 696 aa8.51□□□□□ -1.05
LINC01108-201ENST00000427276 TTLL7Q6ZT98 887 aa8.51□□□□□ -1.05
LINC01108-201ENST00000427276 TMEM139Q8IV31 216 aa8.51□□□□□ -1.05
LINC01108-201ENST00000427276 DIS3L2Q8IYB7 885 aaKnown RBP8.51□□□□□ -1.05
LINC01108-201ENST00000427276 KIFC2Q96AC6 838 aa8.51□□□□□ -1.05
LINC01108-201ENST00000427276 PCMTD1Q96MG8 357 aaPredicted RBP8.51□□□□□ -1.05
LINC01108-201ENST00000427276 CABP5Q9NP86 173 aa8.51□□□□□ -1.05
LINC01108-201ENST00000427276 TUBE1Q9UJT0 475 aa8.51□□□□□ -1.05
LINC01108-201ENST00000427276 ANGEL1Q9UNK9 670 aaKnown RBP8.51□□□□□ -1.05
LINC01108-201ENST00000427276 SLC12A7Q9Y666 1083 aa8.51□□□□□ -1.05
LINC01108-201ENST00000427276 NEDD4P46934 1319 aa8.51□□□□□ -1.05
LINC01108-201ENST00000427276 EIF3CLB5ME19 914 aaKnown RBP8.51□□□□□ -1.05
LINC01108-201ENST00000427276 SRGAP2O75044 1071 aa8.51□□□□□ -1.05
LINC01108-201ENST00000427276 SNRPA1P09661 255 aaKnown RBP8.51□□□□□ -1.05
LINC01108-201ENST00000427276 IL15P40933 162 aaPredicted RBP8.51□□□□□ -1.05
LINC01108-201ENST00000427276 CABP4P57796 275 aa8.51□□□□□ -1.05
LINC01108-201ENST00000427276 CTR9Q6PD62 1173 aa8.51□□□□□ -1.05
LINC01108-201ENST00000427276 NOA1Q8NC60 698 aaKnown RBP8.51□□□□□ -1.05
LINC01108-201ENST00000427276 XAGE2Q96GT9 111 aa8.51□□□□□ -1.05
LINC01108-201ENST00000427276 EIF3CQ99613 913 aaKnown RBP8.51□□□□□ -1.05
LINC01108-201ENST00000427276 DEF6Q9H4E7 631 aa8.51□□□□□ -1.05
LINC01108-201ENST00000427276 ANKZF1Q9H8Y5 726 aa8.51□□□□□ -1.05
LINC01108-201ENST00000427276 AXIN2Q9Y2T1 843 aa8.51□□□□□ -1.05
LINC01108-201ENST00000427276 CACNA1FO60840 1977 aa8.51□□□□□ -1.05
LINC01108-201ENST00000427276 SPATA31D1Q6ZQQ2 1576 aa8.51□□□□□ -1.05
LINC01108-201ENST00000427276 EYA2O00167 538 aa8.51□□□□□ -1.05
LINC01108-201ENST00000427276 CTDSPL2Q05D32 466 aa8.51□□□□□ -1.05
LINC01108-201ENST00000427276 BEND6Q5SZJ8 279 aaPredicted RBP8.51□□□□□ -1.05
LINC01108-201ENST00000427276 CYB5R4Q7L1T6 521 aa8.51□□□□□ -1.05
LINC01108-201ENST00000427276 FCHSD1Q86WN1 690 aa8.51□□□□□ -1.05
LINC01108-201ENST00000427276 KCNH5Q8NCM2 988 aa8.51□□□□□ -1.05
LINC01108-201ENST00000427276 CCDC148Q8NFR7 591 aa8.51□□□□□ -1.05
LINC01108-201ENST00000427276 CRACR2AQ9BSW2 395 aa8.51□□□□□ -1.05
LINC01108-201ENST00000427276 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.51□□□□□ -1.05
LINC01108-201ENST00000427276 TEX13AQ9BXU3 409 aaPredicted RBP8.51□□□□□ -1.05
LINC01108-201ENST00000427276 BLZF1Q9H2G9 400 aa8.51□□□□□ -1.05
LINC01108-201ENST00000427276 TAB2Q9NYJ8 693 aa8.51□□□□□ -1.05
LINC01108-201ENST00000427276 HDAC6Q9UBN7 1215 aa8.51□□□□□ -1.05
LINC01108-201ENST00000427276 TRIM10Q9UDY6 481 aa8.51□□□□□ -1.05
LINC01108-201ENST00000427276 ADGRG1Q9Y653 693 aa8.51□□□□□ -1.05
LINC01108-201ENST00000427276 A1BGP04217 495 aa8.5□□□□□ -1.05
LINC01108-201ENST00000427276 FAM43BQ6ZT52 329 aaPredicted RBP8.5□□□□□ -1.05
LINC01108-201ENST00000427276 TEX2Q8IWB9 1127 aa8.5□□□□□ -1.05
LINC01108-201ENST00000427276 TRIM22Q8IYM9 498 aa8.5□□□□□ -1.05
LINC01108-201ENST00000427276 NAPGQ99747 312 aaPredicted RBP8.5□□□□□ -1.05
LINC01108-201ENST00000427276 POLD4Q9HCU8 107 aa8.5□□□□□ -1.05
LINC01108-201ENST00000427276 CWC25Q9NXE8 425 aaPredicted RBP8.5□□□□□ -1.05
LINC01108-201ENST00000427276 PCDHB6Q9Y5E3 794 aa8.5□□□□□ -1.05
LINC01108-201ENST00000427276 PTPRUQ92729 1446 aa8.5□□□□□ -1.05
LINC01108-201ENST00000427276 RNF40O75150 1001 aa8.5□□□□□ -1.05
LINC01108-201ENST00000427276 TATP17735 454 aaPredicted RBP8.5□□□□□ -1.05
LINC01108-201ENST00000427276 GUCY1A2P33402 732 aa8.5□□□□□ -1.05
LINC01108-201ENST00000427276 LIG3P49916 1009 aa8.5□□□□□ -1.05
LINC01108-201ENST00000427276 DNA2P51530 1060 aa8.5□□□□□ -1.05
LINC01108-201ENST00000427276 TSR1Q2NL82 804 aaKnown RBP8.5□□□□□ -1.05
LINC01108-201ENST00000427276 METTL24Q5JXM2 366 aa8.5□□□□□ -1.05
LINC01108-201ENST00000427276 RESP18Q5W5W9 173 aa8.5□□□□□ -1.05
LINC01108-201ENST00000427276 APOA5Q6Q788 366 aa8.5□□□□□ -1.05
LINC01108-201ENST00000427276 ATG9AQ7Z3C6 839 aa8.5□□□□□ -1.05
LINC01108-201ENST00000427276 MB21D2Q8IYB1 491 aaPredicted RBP8.5□□□□□ -1.05
LINC01108-201ENST00000427276 HELBQ8NG08 1087 aaPredicted RBP8.5□□□□□ -1.05
LINC01108-201ENST00000427276 NKX2-3Q8TAU0 364 aa8.5□□□□□ -1.05
LINC01108-201ENST00000427276 ORAI2Q96SN7 254 aa8.5□□□□□ -1.05
LINC01108-201ENST00000427276 CTNND2Q9UQB3 1225 aa8.5□□□□□ -1.05
LINC01108-201ENST00000427276 RGPD8O14715 1765 aaPredicted RBP8.5□□□□□ -1.05
LINC01108-201ENST00000427276 ZNF142P52746 1687 aaPredicted RBP8.49□□□□□ -1.05
LINC01108-201ENST00000427276 ADAMTS13Q76LX8 1427 aa8.49□□□□□ -1.05
LINC01108-201ENST00000427276 CHRNA2Q15822 529 aa8.49□□□□□ -1.05
LINC01108-201ENST00000427276 MLKLQ8NB16 471 aa8.49□□□□□ -1.05
LINC01108-201ENST00000427276 AFAP1L1Q8TED9 768 aa8.49□□□□□ -1.05
LINC01108-201ENST00000427276 AIDAQ96BJ3 306 aa8.49□□□□□ -1.05
LINC01108-201ENST00000427276 FAM89AQ96GI7 184 aa8.49□□□□□ -1.05
LINC01108-201ENST00000427276 EPSTI1Q96J88 318 aa8.49□□□□□ -1.05
LINC01108-201ENST00000427276 PSMB7Q99436 277 aa8.49□□□□□ -1.05
LINC01108-201ENST00000427276 AGXT2Q9BYV1 514 aa8.49□□□□□ -1.05
LINC01108-201ENST00000427276 GBP3Q9H0R5 595 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms