RNA–Protein interactions for RNA: ENST00000427157.1

LINC02541-201, Transcript of long intergenic non-protein coding RNA 2541, humanhuman

TSL 3 BASIC

Gene LINC02541, Length 327 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02541-201ENST00000427157 PCNX4Q63HM2 1172 aa6.74□□□□□ -1.33
LINC02541-201ENST00000427157 TNKS2Q9H2K2 1166 aa6.74□□□□□ -1.33
LINC02541-201ENST00000427157 RC3H2Q9HBD1 1191 aaKnown RBP6.74□□□□□ -1.33
LINC02541-201ENST00000427157 FAM8A1Q9UBU6 413 aa6.74□□□□□ -1.33
LINC02541-201ENST00000427157 PCDHA4Q9UN74 947 aa6.74□□□□□ -1.33
LINC02541-201ENST00000427157 FANCGO15287 622 aa6.73□□□□□ -1.33
LINC02541-201ENST00000427157 SCARA3Q6AZY7 606 aa6.73□□□□□ -1.33
LINC02541-201ENST00000427157 POU5F2Q8N7G0 328 aa6.73□□□□□ -1.33
LINC02541-201ENST00000427157 BIN1O00499 593 aa6.72□□□□□ -1.33
LINC02541-201ENST00000427157 PTPN11Q06124 597 aaPredicted RBP6.72□□□□□ -1.33
LINC02541-201ENST00000427157 ANGEL2Q5VTE6 544 aaKnown RBP6.72□□□□□ -1.33
LINC02541-201ENST00000427157 ARMCX6Q7L4S7 300 aa6.72□□□□□ -1.33
LINC02541-201ENST00000427157 SPACA3Q8IXA5 215 aa6.72□□□□□ -1.33
LINC02541-201ENST00000427157 LRRN4CLQ8ND94 238 aa6.72□□□□□ -1.33
LINC02541-201ENST00000427157 ELMO3Q96BJ8 720 aa6.72□□□□□ -1.33
LINC02541-201ENST00000427157 GTF2IRD1Q9UHL9 959 aa6.72□□□□□ -1.33
LINC02541-201ENST00000427157 CYP8B1Q9UNU6 501 aa6.72□□□□□ -1.33
LINC02541-201ENST00000427157 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.72□□□□□ -1.33
LINC02541-201ENST00000427157 CARMIL2Q6F5E8 1435 aa6.71□□□□□ -1.34
LINC02541-201ENST00000427157 IGF2BP3O00425 579 aaKnown RBP eCLIP6.71□□□□□ -1.34
LINC02541-201ENST00000427157 LDHBP07195 334 aaKnown RBP6.71□□□□□ -1.34
LINC02541-201ENST00000427157 INPP5AQ14642 412 aa6.71□□□□□ -1.34
LINC02541-201ENST00000427157 LRFN4Q6PJG9 635 aa6.71□□□□□ -1.34
LINC02541-201ENST00000427157 CDC37L1Q7L3B6 337 aa6.71□□□□□ -1.34
LINC02541-201ENST00000427157 ATG4DQ86TL0 474 aaPredicted RBP6.71□□□□□ -1.34
LINC02541-201ENST00000427157 PI4K2BQ8TCG2 481 aa6.71□□□□□ -1.34
LINC02541-201ENST00000427157 GAL3ST3Q96A11 431 aa6.71□□□□□ -1.34
LINC02541-201ENST00000427157 TTF2Q9UNY4 1162 aaKnown RBP6.71□□□□□ -1.34
LINC02541-201ENST00000427157 SNX11Q9Y5W9 270 aa6.71□□□□□ -1.34
LINC02541-201ENST00000427157 PRAMEF27A3QJZ7 478 aa6.7□□□□□ -1.34
LINC02541-201ENST00000427157 EOMESO95936 686 aa6.7□□□□□ -1.34
LINC02541-201ENST00000427157 C8AP07357 584 aa6.7□□□□□ -1.34
LINC02541-201ENST00000427157 NKPD1Q17RQ9 610 aa6.7□□□□□ -1.34
LINC02541-201ENST00000427157 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.7□□□□□ -1.34
LINC02541-201ENST00000427157 KCT2Q8NC54 265 aa6.7□□□□□ -1.34
LINC02541-201ENST00000427157 PLPPR2Q96GM1 343 aa6.7□□□□□ -1.34
LINC02541-201ENST00000427157 FBRSQ9HAH7 460 aa6.7□□□□□ -1.34
LINC02541-201ENST00000427157 LRIG2O94898 1065 aa6.69□□□□□ -1.34
LINC02541-201ENST00000427157 SV2BQ7L1I2 683 aa6.69□□□□□ -1.34
LINC02541-201ENST00000427157 PRDM7Q9NQW5 492 aa6.69□□□□□ -1.34
LINC02541-201ENST00000427157 PRDM5Q9NQX1 630 aaPredicted RBP6.69□□□□□ -1.34
LINC02541-201ENST00000427157 KRTAP4-8A0A0G2JLE6 195 aa6.68□□□□□ -1.34
LINC02541-201ENST00000427157 GNAT3A8MTJ3 354 aa6.68□□□□□ -1.34
LINC02541-201ENST00000427157 SLITRK5O94991 958 aa6.68□□□□□ -1.34
LINC02541-201ENST00000427157 GNA15P30679 374 aa6.68□□□□□ -1.34
LINC02541-201ENST00000427157 CDK8P49336 464 aa6.68□□□□□ -1.34
LINC02541-201ENST00000427157 IKZF1Q13422 519 aa6.68□□□□□ -1.34
LINC02541-201ENST00000427157 TTBK2Q6IQ55 1244 aa6.68□□□□□ -1.34
LINC02541-201ENST00000427157 SLC23A3Q6PIS1 610 aa6.68□□□□□ -1.34
LINC02541-201ENST00000427157 CYFIP1Q7L576 1253 aa6.68□□□□□ -1.34
LINC02541-201ENST00000427157 ZNF507Q8TCN5 953 aa6.68□□□□□ -1.34
LINC02541-201ENST00000427157 ASB11Q8WXH4 323 aa6.68□□□□□ -1.34
LINC02541-201ENST00000427157 FAM168AQ92567 244 aa6.68□□□□□ -1.34
LINC02541-201ENST00000427157 MAPK8IP1Q9UQF2 711 aa6.68□□□□□ -1.34
LINC02541-201ENST00000427157 CLCN7P51798 805 aa6.67□□□□□ -1.34
LINC02541-201ENST00000427157 JAG1P78504 1218 aa6.67□□□□□ -1.34
LINC02541-201ENST00000427157 SLBPQ14493 270 aaKnown RBP eCLIP6.67□□□□□ -1.34
LINC02541-201ENST00000427157 NKG7Q16617 165 aa6.67□□□□□ -1.34
LINC02541-201ENST00000427157 WIPI1Q5MNZ9 446 aaPredicted RBP6.67□□□□□ -1.34
LINC02541-201ENST00000427157 HDXQ7Z353 690 aa6.67□□□□□ -1.34
LINC02541-201ENST00000427157 FRMD6Q96NE9 622 aa6.67□□□□□ -1.34
LINC02541-201ENST00000427157 PITPNM2Q9BZ72 1349 aa6.67□□□□□ -1.34
LINC02541-201ENST00000427157 PRPF40AO75400 957 aaKnown RBP6.66□□□□□ -1.34
LINC02541-201ENST00000427157 EIF4BP23588 611 aaKnown RBP6.66□□□□□ -1.34
LINC02541-201ENST00000427157 ZP2Q05996 745 aa6.66□□□□□ -1.34
LINC02541-201ENST00000427157 FZD5Q13467 585 aa6.66□□□□□ -1.34
LINC02541-201ENST00000427157 ZNF648Q5T619 568 aaPredicted RBP6.66□□□□□ -1.34
LINC02541-201ENST00000427157 FLAD1Q8NFF5 587 aa6.66□□□□□ -1.34
LINC02541-201ENST00000427157 MIPEPQ99797 713 aa6.66□□□□□ -1.34
LINC02541-201ENST00000427157 TRAIPQ9BWF2 469 aa6.66□□□□□ -1.34
LINC02541-201ENST00000427157 FOXQ1Q9C009 403 aa6.66□□□□□ -1.34
LINC02541-201ENST00000427157 WNT10AQ9GZT5 417 aa6.66□□□□□ -1.34
LINC02541-201ENST00000427157 RNF19AQ9NV58 838 aa6.66□□□□□ -1.34
LINC02541-201ENST00000427157 CNTNAP4Q9C0A0 1308 aa6.66□□□□□ -1.34
LINC02541-201ENST00000427157 PRR33A8MZF0 331 aa6.65□□□□□ -1.34
LINC02541-201ENST00000427157 ETF1P62495 437 aaKnown RBP6.65□□□□□ -1.34
LINC02541-201ENST00000427157 CCDC85BQ15834 202 aaPredicted RBP6.65□□□□□ -1.34
LINC02541-201ENST00000427157 TPX2Q9ULW0 747 aaKnown RBP6.65□□□□□ -1.34
LINC02541-201ENST00000427157 ARID1BQ8NFD5 2236 aaPredicted RBP6.64□□□□□ -1.35
LINC02541-201ENST00000427157 CAP2P40123 477 aa6.64□□□□□ -1.35
LINC02541-201ENST00000427157 RPS26P62854 115 aaKnown RBP6.64□□□□□ -1.35
LINC02541-201ENST00000427157 SEPT6Q14141 434 aa6.64□□□□□ -1.35
LINC02541-201ENST00000427157 MFSD4AQ8N468 514 aa6.64□□□□□ -1.35
LINC02541-201ENST00000427157 PCDHB5Q9Y5E4 795 aa6.64□□□□□ -1.35
LINC02541-201ENST00000427157 SNCAIPQ9Y6H5 919 aa6.64□□□□□ -1.35
LINC02541-201ENST00000427157 ZNF865P0CJ78 1059 aaPredicted RBP6.63□□□□□ -1.35
LINC02541-201ENST00000427157 GRK4P32298 578 aa6.63□□□□□ -1.35
LINC02541-201ENST00000427157 SFRP5Q5T4F7 317 aa6.63□□□□□ -1.35
LINC02541-201ENST00000427157 C22orf34Q6ZV56 151 aa6.63□□□□□ -1.35
LINC02541-201ENST00000427157 HID1Q8IV36 788 aa6.63□□□□□ -1.35
LINC02541-201ENST00000427157 MFSD2AQ8NA29 543 aa6.63□□□□□ -1.35
LINC02541-201ENST00000427157 RIN3Q8TB24 985 aa6.63□□□□□ -1.35
LINC02541-201ENST00000427157 TMEM40Q8WWA1 233 aa6.63□□□□□ -1.35
LINC02541-201ENST00000427157 HSPA12BQ96MM6 686 aa6.63□□□□□ -1.35
LINC02541-201ENST00000427157 DUSP9Q99956 384 aaKnown RBP6.63□□□□□ -1.35
LINC02541-201ENST00000427157 AK5Q9Y6K8 562 aa6.63□□□□□ -1.35
LINC02541-201ENST00000427157 FAM155AB1AL88 458 aaPredicted RBP6.62□□□□□ -1.35
LINC02541-201ENST00000427157 PATL2C9JE40 543 aaKnown RBP6.62□□□□□ -1.35
LINC02541-201ENST00000427157 LIG3P49916 1009 aa6.62□□□□□ -1.35
LINC02541-201ENST00000427157 FGD1P98174 961 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms