RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 UBXN2AP68543 259 aa12.56□□□□□ -0.4
HDLBP-213ENST00000427007 OS9Q13438 667 aaPredicted RBP12.56□□□□□ -0.4
HDLBP-213ENST00000427007 RRP1BQ14684 758 aaKnown RBP12.56□□□□□ -0.4
HDLBP-213ENST00000427007 TNNI3KQ59H18 835 aa12.56□□□□□ -0.4
HDLBP-213ENST00000427007 TTC39AQ5SRH9 613 aa12.56□□□□□ -0.4
HDLBP-213ENST00000427007 ZKSCAN2Q63HK3 967 aa12.56□□□□□ -0.4
HDLBP-213ENST00000427007 ANKRD13CQ8N6S4 541 aa12.56□□□□□ -0.4
HDLBP-213ENST00000427007 DBNDD2Q9BQY9 259 aa12.56□□□□□ -0.4
HDLBP-213ENST00000427007 RNF208Q9H0X6 261 aa12.56□□□□□ -0.4
HDLBP-213ENST00000427007 AATFQ9NY61 560 aaKnown RBP eCLIP12.56□□□□□ -0.4
HDLBP-213ENST00000427007 AGTPBP1Q9UPW5 1226 aa12.56□□□□□ -0.4
HDLBP-213ENST00000427007 COLQQ9Y215 455 aaPredicted RBP12.56□□□□□ -0.4
HDLBP-213ENST00000427007 SLC45A1Q9Y2W3 748 aa12.56□□□□□ -0.4
HDLBP-213ENST00000427007 FPGT-TNNI3KV9GXZ4 949 aa12.56□□□□□ -0.4
HDLBP-213ENST00000427007 COL2A1P02458 1487 aaPredicted RBP12.56□□□□□ -0.4
HDLBP-213ENST00000427007 H0YGN5 161 aa12.55□□□□□ -0.4
HDLBP-213ENST00000427007 ADCY3O60266 1144 aa12.55□□□□□ -0.4
HDLBP-213ENST00000427007 ELNP15502 786 aa12.55□□□□□ -0.4
HDLBP-213ENST00000427007 GJA8P48165 433 aa12.55□□□□□ -0.4
HDLBP-213ENST00000427007 FLT3LGP49771 235 aa12.55□□□□□ -0.4
HDLBP-213ENST00000427007 SPP2Q13103 211 aa12.55□□□□□ -0.4
HDLBP-213ENST00000427007 POLA2Q14181 598 aa12.55□□□□□ -0.4
HDLBP-213ENST00000427007 NAA16Q6N069 864 aaPredicted RBP12.55□□□□□ -0.4
HDLBP-213ENST00000427007 SLAIN1Q8ND83 568 aa12.55□□□□□ -0.4
HDLBP-213ENST00000427007 NKX2-3Q8TAU0 364 aa12.55□□□□□ -0.4
HDLBP-213ENST00000427007 DPF3Q92784 378 aa12.55□□□□□ -0.4
HDLBP-213ENST00000427007 NOL10Q9BSC4 688 aaKnown RBP12.55□□□□□ -0.4
HDLBP-213ENST00000427007 UNC93B1Q9H1C4 597 aa12.55□□□□□ -0.4
HDLBP-213ENST00000427007 TAOK2Q9UL54 1235 aa12.55□□□□□ -0.4
HDLBP-213ENST00000427007 SURF6O75683 361 aaKnown RBP12.54□□□□□ -0.4
HDLBP-213ENST00000427007 MAP4K4O95819 1239 aaPredicted RBP12.54□□□□□ -0.4
HDLBP-213ENST00000427007 GJB1P08034 283 aa12.54□□□□□ -0.4
HDLBP-213ENST00000427007 CAP2P40123 477 aa12.54□□□□□ -0.4
HDLBP-213ENST00000427007 HMGCS2P54868 508 aa12.54□□□□□ -0.4
HDLBP-213ENST00000427007 CCDC158Q5M9N0 1113 aa12.54□□□□□ -0.4
HDLBP-213ENST00000427007 ADGRA1Q86SQ6 560 aa12.54□□□□□ -0.4
HDLBP-213ENST00000427007 MAPKAPK5Q8IW41 473 aa12.54□□□□□ -0.4
HDLBP-213ENST00000427007 PROCA1Q8NCQ7 364 aaPredicted RBP12.54□□□□□ -0.4
HDLBP-213ENST00000427007 ZNF280CQ8ND82 737 aa12.54□□□□□ -0.4
HDLBP-213ENST00000427007 PNMA3Q9UL41 463 aa12.54□□□□□ -0.4
HDLBP-213ENST00000427007 USP17L5A8MUK1 530 aa12.53□□□□□ -0.4
HDLBP-213ENST00000427007 BAG3O95817 575 aa12.53□□□□□ -0.4
HDLBP-213ENST00000427007 INHAP05111 366 aa12.53□□□□□ -0.4
HDLBP-213ENST00000427007 CYP2E1P05181 493 aaPredicted RBP12.53□□□□□ -0.4
HDLBP-213ENST00000427007 ZAP70P43403 619 aa12.53□□□□□ -0.4
HDLBP-213ENST00000427007 FXR1P51114 621 aaKnown RBP eCLIP12.53□□□□□ -0.4
HDLBP-213ENST00000427007 ATP8B2P98198 1209 aa12.53□□□□□ -0.4
HDLBP-213ENST00000427007 ITPRIPQ8IWB1 547 aa12.53□□□□□ -0.4
HDLBP-213ENST00000427007 FTSJ3Q8IY81 847 aaKnown RBP12.53□□□□□ -0.4
HDLBP-213ENST00000427007 SSH3Q8TE77 659 aa12.53□□□□□ -0.4
HDLBP-213ENST00000427007 U2AF1L4Q8WU68 220 aaKnown RBP12.53□□□□□ -0.4
HDLBP-213ENST00000427007 TGFBRAP1Q8WUH2 860 aa12.53□□□□□ -0.4
HDLBP-213ENST00000427007 GPR108Q9NPR9 543 aa12.53□□□□□ -0.4
HDLBP-213ENST00000427007 TLR7Q9NYK1 1049 aaKnown RBP12.53□□□□□ -0.4
HDLBP-213ENST00000427007 HNRNPUQ00839 825 aaKnown RBP eCLIP12.52□□□□□ -0.411e-6■□□□□ 8.9
HDLBP-213ENST00000427007 FAM110CQ1W6H9 321 aa12.52□□□□□ -0.41
HDLBP-213ENST00000427007 COA7Q96BR5 231 aa12.52□□□□□ -0.41
HDLBP-213ENST00000427007 CCDC8Q9H0W5 538 aaPredicted RBP12.52□□□□□ -0.41
HDLBP-213ENST00000427007 AS3MTQ9HBK9 375 aa12.52□□□□□ -0.41
HDLBP-213ENST00000427007 PIH1D3Q9NQM4 214 aaKnown RBP12.52□□□□□ -0.41
HDLBP-213ENST00000427007 PI4KBQ9UBF8 816 aa12.52□□□□□ -0.41
HDLBP-213ENST00000427007 HERC5Q9UII4 1024 aaKnown RBP12.52□□□□□ -0.41
HDLBP-213ENST00000427007 FLT1P17948 1338 aa12.52□□□□□ -0.41
HDLBP-213ENST00000427007 GDF11O95390 407 aa12.51□□□□□ -0.41
HDLBP-213ENST00000427007 SGPL1O95470 568 aa12.51□□□□□ -0.41
HDLBP-213ENST00000427007 RLBP1P12271 317 aa12.51□□□□□ -0.41
HDLBP-213ENST00000427007 DYNLL1P63167 89 aaKnown RBP12.51□□□□□ -0.41
HDLBP-213ENST00000427007 JAG1P78504 1218 aa12.51□□□□□ -0.41
HDLBP-213ENST00000427007 IRF5Q13568 498 aa12.51□□□□□ -0.41
HDLBP-213ENST00000427007 MTMR2Q13614 643 aa12.51□□□□□ -0.41
HDLBP-213ENST00000427007 SHROOM1Q2M3G4 852 aaPredicted RBP12.51□□□□□ -0.41
HDLBP-213ENST00000427007 CHRDL2Q6WN34 429 aa12.51□□□□□ -0.41
HDLBP-213ENST00000427007 UBE2Q1Q7Z7E8 422 aa12.51□□□□□ -0.41
HDLBP-213ENST00000427007 CRACR2BQ8N4Y2 399 aaPredicted RBP12.51□□□□□ -0.41
HDLBP-213ENST00000427007 PXYLP1Q8TE99 480 aa12.51□□□□□ -0.41
HDLBP-213ENST00000427007 TBC1D2Q9BYX2 928 aa12.51□□□□□ -0.41
HDLBP-213ENST00000427007 ASCC2Q9H1I8 757 aaPredicted RBP12.51□□□□□ -0.41
HDLBP-213ENST00000427007 DHX36Q9H2U1 1008 aaKnown RBP12.51□□□□□ -0.41
HDLBP-213ENST00000427007 DNAJC18Q9H819 358 aa12.51□□□□□ -0.41
HDLBP-213ENST00000427007 SAP30BPQ9UHR5 308 aaKnown RBP12.51□□□□□ -0.41
HDLBP-213ENST00000427007 DBNLQ9UJU6 430 aaKnown RBP12.51□□□□□ -0.41
HDLBP-213ENST00000427007 PALD1Q9ULE6 856 aa12.51□□□□□ -0.41
HDLBP-213ENST00000427007 PLXNB2O15031 1838 aa12.51□□□□□ -0.41
HDLBP-213ENST00000427007 MYH1P12882 1939 aa12.5□□□□□ -0.41
HDLBP-213ENST00000427007 DOCK3Q8IZD9 2030 aa12.5□□□□□ -0.41
HDLBP-213ENST00000427007 ZBTB7BO15156 539 aaPredicted RBP12.5□□□□□ -0.41
HDLBP-213ENST00000427007 FARP2O94887 1054 aaPredicted RBP12.5□□□□□ -0.41
HDLBP-213ENST00000427007 PLCG2P16885 1265 aa12.5□□□□□ -0.41
HDLBP-213ENST00000427007 PPP4CP60510 307 aa12.5□□□□□ -0.41
HDLBP-213ENST00000427007 PABPC4Q13310 644 aaKnown RBP eCLIP12.5□□□□□ -0.41
HDLBP-213ENST00000427007 SH3D19Q5HYK7 790 aa12.5□□□□□ -0.41
HDLBP-213ENST00000427007 DEFB118Q96PH6 123 aa12.5□□□□□ -0.41
HDLBP-213ENST00000427007 HTATIP2Q9BUP3 242 aa12.5□□□□□ -0.41
HDLBP-213ENST00000427007 TRIM34Q9BYJ4 488 aa12.5□□□□□ -0.41
HDLBP-213ENST00000427007 NDUFB9Q9Y6M9 179 aa12.5□□□□□ -0.41
HDLBP-213ENST00000427007 PEX10O60683 326 aa12.49□□□□□ -0.41
HDLBP-213ENST00000427007 IDH1O75874 414 aaKnown RBP12.49□□□□□ -0.41
HDLBP-213ENST00000427007 TFRCP02786 760 aaKnown RBP12.49□□□□□ -0.41
HDLBP-213ENST00000427007 ASNSP08243 561 aa12.49□□□□□ -0.41
HDLBP-213ENST00000427007 CYP7A1P22680 504 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms