RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 IRF6O14896 467 aa20.83■□□□□ 0.93
LMCD1-204ENST00000426878 IGHDP01880 384 aa20.83■□□□□ 0.93
LMCD1-204ENST00000426878 SLURP2P0DP57 97 aa20.83■□□□□ 0.93
LMCD1-204ENST00000426878 OTUD7BQ6GQQ9 843 aa20.83■□□□□ 0.93
LMCD1-204ENST00000426878 PTPN18Q99952 460 aa20.83■□□□□ 0.93
LMCD1-204ENST00000426878 CRNKL1Q9BZJ0 848 aaKnown RBP20.83■□□□□ 0.93
LMCD1-204ENST00000426878 STAP2Q9UGK3 403 aa20.83■□□□□ 0.93
LMCD1-204ENST00000426878 PALD1Q9ULE6 856 aa20.83■□□□□ 0.93
LMCD1-204ENST00000426878 USP5P45974 858 aa20.82■□□□□ 0.92
LMCD1-204ENST00000426878 SNAPC2Q13487 334 aa20.82■□□□□ 0.92
LMCD1-204ENST00000426878 BRI3BPQ8WY22 251 aa20.82■□□□□ 0.92
LMCD1-204ENST00000426878 KCNH4Q9UQ05 1017 aa20.82■□□□□ 0.92
LMCD1-204ENST00000426878 SIPA1L1O43166 1804 aa20.82■□□□□ 0.92
LMCD1-204ENST00000426878 CCL15-CCL14A0A0B4J2E2 113 aa20.81■□□□□ 0.92
LMCD1-204ENST00000426878 HLA-DOAP06340 250 aa20.81■□□□□ 0.92
LMCD1-204ENST00000426878 CETPP11597 493 aa20.81■□□□□ 0.92
LMCD1-204ENST00000426878 CCL15Q16663 113 aa20.81■□□□□ 0.92
LMCD1-204ENST00000426878 PICK1Q9NRD5 415 aa20.81■□□□□ 0.92
LMCD1-204ENST00000426878 MYH1P12882 1939 aa20.81■□□□□ 0.92
LMCD1-204ENST00000426878 CASP8AP2Q9UKL3 1982 aa20.81■□□□□ 0.92
LMCD1-204ENST00000426878 CXCL11O14625 94 aa20.8■□□□□ 0.92
LMCD1-204ENST00000426878 TBC1D8O95759 1140 aa20.8■□□□□ 0.92
LMCD1-204ENST00000426878 PTPRAP18433 802 aa20.8■□□□□ 0.92
LMCD1-204ENST00000426878 LCORLQ8N3X6 602 aa20.8■□□□□ 0.92
LMCD1-204ENST00000426878 SAP30BPQ9UHR5 308 aaKnown RBP20.8■□□□□ 0.92
LMCD1-204ENST00000426878 DOCK1Q14185 1865 aa20.8■□□□□ 0.92
LMCD1-204ENST00000426878 FAM196BA6NMK8 535 aa20.79■□□□□ 0.92
LMCD1-204ENST00000426878 EHD4Q9H223 541 aa20.79■□□□□ 0.92
LMCD1-204ENST00000426878 ZCCHC17Q9NP64 241 aaKnown RBP20.79■□□□□ 0.92
LMCD1-204ENST00000426878 ZFYP08048 801 aaPredicted RBP20.78■□□□□ 0.92
LMCD1-204ENST00000426878 CAP2P40123 477 aa20.78■□□□□ 0.92
LMCD1-204ENST00000426878 PDE1AP54750 535 aa20.78■□□□□ 0.92
LMCD1-204ENST00000426878 SLFNL1Q499Z3 407 aa20.78■□□□□ 0.92
LMCD1-204ENST00000426878 TTC6Q86TZ1 520 aa20.78■□□□□ 0.92
LMCD1-204ENST00000426878 TNS4Q8IZW8 715 aa20.78■□□□□ 0.92
LMCD1-204ENST00000426878 DNAJC18Q9H819 358 aa20.78■□□□□ 0.92
LMCD1-204ENST00000426878 ARMT1Q9H993 441 aa20.78■□□□□ 0.92
LMCD1-204ENST00000426878 ZHX2Q9Y6X8 837 aa20.78■□□□□ 0.92
LMCD1-204ENST00000426878 DDX60LQ5H9U9 1706 aaKnown RBP20.78■□□□□ 0.92
LMCD1-204ENST00000426878 MBD4O95243 580 aa20.78■□□□□ 0.92
LMCD1-204ENST00000426878 CHGBP05060 677 aa20.78■□□□□ 0.92
LMCD1-204ENST00000426878 NUCB1Q02818 461 aa20.78■□□□□ 0.92
LMCD1-204ENST00000426878 RRP1BQ14684 758 aaKnown RBP20.78■□□□□ 0.92
LMCD1-204ENST00000426878 LRRFIP1Q32MZ4 808 aaKnown RBP20.78■□□□□ 0.92
LMCD1-204ENST00000426878 CRACR2BQ8N4Y2 399 aaPredicted RBP20.78■□□□□ 0.92
LMCD1-204ENST00000426878 DCP1AQ9NPI6 582 aaPredicted RBP20.78■□□□□ 0.92
LMCD1-204ENST00000426878 GINM1Q9NU53 330 aa20.78■□□□□ 0.92
LMCD1-204ENST00000426878 AFG3L2Q9Y4W6 797 aa20.78■□□□□ 0.92
LMCD1-204ENST00000426878 GPR25O00155 361 aa20.77■□□□□ 0.91
LMCD1-204ENST00000426878 RNF113AO15541 343 aaKnown RBP20.77■□□□□ 0.91
LMCD1-204ENST00000426878 TRIM34Q9BYJ4 488 aa20.77■□□□□ 0.91
LMCD1-204ENST00000426878 TBC1D2Q9BYX2 928 aa20.77■□□□□ 0.91
LMCD1-204ENST00000426878 LNPKQ9C0E8 428 aa20.77■□□□□ 0.91
LMCD1-204ENST00000426878 PUS7LQ9H0K6 701 aaKnown RBP20.77■□□□□ 0.91
LMCD1-204ENST00000426878 R3HDMLQ9H3Y0 253 aa20.77■□□□□ 0.91
LMCD1-204ENST00000426878 ATP8A2Q9NTI2 1148 aa20.77■□□□□ 0.91
LMCD1-204ENST00000426878 SERPINB13Q9UIV8 391 aa20.77■□□□□ 0.91
LMCD1-204ENST00000426878 TAOK2Q9UL54 1235 aa20.77■□□□□ 0.91
LMCD1-204ENST00000426878 PHIPQ8WWQ0 1821 aa20.76■□□□□ 0.91
LMCD1-204ENST00000426878 BTBD19C9JJ37 291 aa20.76■□□□□ 0.91
LMCD1-204ENST00000426878 IRX6P78412 446 aaPredicted RBP20.76■□□□□ 0.91
LMCD1-204ENST00000426878 MOGSQ13724 837 aa20.76■□□□□ 0.91
LMCD1-204ENST00000426878 CHD1LQ86WJ1 897 aa20.76■□□□□ 0.91
LMCD1-204ENST00000426878 FAM43AQ8N2R8 423 aa20.76■□□□□ 0.91
LMCD1-204ENST00000426878 SDR42E1Q8WUS8 393 aa20.76■□□□□ 0.91
LMCD1-204ENST00000426878 APPBP2Q92624 585 aa20.76■□□□□ 0.91
LMCD1-204ENST00000426878 CRHR2Q13324 411 aa20.75■□□□□ 0.91
LMCD1-204ENST00000426878 B4GALNT3Q6L9W6 998 aa20.75■□□□□ 0.91
LMCD1-204ENST00000426878 TATDN1Q6P1N9 297 aa20.75■□□□□ 0.91
LMCD1-204ENST00000426878 ANKRD23Q86SG2 305 aa20.75■□□□□ 0.91
LMCD1-204ENST00000426878 ZNF296Q8WUU4 475 aaPredicted RBP20.75■□□□□ 0.91
LMCD1-204ENST00000426878 MCM9Q9NXL9 1143 aa20.75■□□□□ 0.91
LMCD1-204ENST00000426878 NAV1Q8NEY1 1877 aa20.75■□□□□ 0.91
LMCD1-204ENST00000426878 A0A0G2JLL6 359 aaPredicted RBP20.74■□□□□ 0.91
LMCD1-204ENST00000426878 ASNSP08243 561 aa20.74■□□□□ 0.91
LMCD1-204ENST00000426878 PLCD1P51178 756 aa20.74■□□□□ 0.91
LMCD1-204ENST00000426878 GABPAQ06546 454 aa20.74■□□□□ 0.91
LMCD1-204ENST00000426878 PRRT2Q7Z6L0 340 aaPredicted RBP20.74■□□□□ 0.91
LMCD1-204ENST00000426878 TICAM2Q86XR7 235 aa20.74■□□□□ 0.91
LMCD1-204ENST00000426878 OSBP2Q969R2 916 aa20.74■□□□□ 0.91
LMCD1-204ENST00000426878 STRBPQ96SI9 672 aaKnown RBP20.74■□□□□ 0.91
LMCD1-204ENST00000426878 ATAD5Q96QE3 1844 aa20.73■□□□□ 0.91
LMCD1-204ENST00000426878 PRKAB2O43741 272 aa20.73■□□□□ 0.91
LMCD1-204ENST00000426878 FKTNO75072 461 aa20.73■□□□□ 0.91
LMCD1-204ENST00000426878 POLR3DP05423 398 aaPredicted RBP20.73■□□□□ 0.91
LMCD1-204ENST00000426878 FASTKD5Q7L8L6 764 aaKnown RBP20.73■□□□□ 0.91
LMCD1-204ENST00000426878 OSBPL3Q9H4L5 887 aa20.73■□□□□ 0.91
LMCD1-204ENST00000426878 USP17L5A8MUK1 530 aa20.72■□□□□ 0.91
LMCD1-204ENST00000426878 TAF1CQ15572 869 aaPredicted RBP20.72■□□□□ 0.91
LMCD1-204ENST00000426878 SLC4A8Q2Y0W8 1093 aa20.72■□□□□ 0.91
LMCD1-204ENST00000426878 ZNF280CQ8ND82 737 aa20.72■□□□□ 0.91
LMCD1-204ENST00000426878 EVI5LQ96CN4 794 aa20.72■□□□□ 0.91
LMCD1-204ENST00000426878 WDR18Q9BV38 432 aa20.72■□□□□ 0.91
LMCD1-204ENST00000426878 ZFYVE28Q9HCC9 887 aa20.72■□□□□ 0.91
LMCD1-204ENST00000426878 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.72■□□□□ 0.91
LMCD1-204ENST00000426878 PTPRFP10586 1907 aa20.72■□□□□ 0.91
LMCD1-204ENST00000426878 JAG1P78504 1218 aa20.71■□□□□ 0.91
LMCD1-204ENST00000426878 GPAT2Q6NUI2 795 aa20.71■□□□□ 0.91
LMCD1-204ENST00000426878 GIMAP6Q6P9H5 292 aa20.71■□□□□ 0.91
LMCD1-204ENST00000426878 FSD1Q9BTV5 496 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms