RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 HTRA3P83110 453 aa18.55■□□□□ 0.56
SHOX2-202ENST00000425436 EVX2Q03828 476 aa18.55■□□□□ 0.56
SHOX2-202ENST00000425436 LSG1Q9H089 658 aaKnown RBP18.55■□□□□ 0.56
SHOX2-202ENST00000425436 GBA2Q9HCG7 927 aaPredicted RBP18.55■□□□□ 0.56
SHOX2-202ENST00000425436 ATP8A2Q9NTI2 1148 aa18.55■□□□□ 0.56
SHOX2-202ENST00000425436 TMEM88BA6NKF7 163 aa18.54■□□□□ 0.56
SHOX2-202ENST00000425436 CYP2D6P10635 497 aa18.54■□□□□ 0.56
SHOX2-202ENST00000425436 C2orf69Q8N8R5 385 aa18.54■□□□□ 0.56
SHOX2-202ENST00000425436 CWC22Q9HCG8 908 aaKnown RBP18.54■□□□□ 0.56
SHOX2-202ENST00000425436 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.54■□□□□ 0.56
SHOX2-202ENST00000425436 NAV1Q8NEY1 1877 aa18.54■□□□□ 0.56
SHOX2-202ENST00000425436 CCDC171Q6TFL3 1326 aa18.54■□□□□ 0.56
SHOX2-202ENST00000425436 CYP2D7A0A087X1C5 515 aa18.54■□□□□ 0.56
SHOX2-202ENST00000425436 FAM196BA6NMK8 535 aa18.54■□□□□ 0.56
SHOX2-202ENST00000425436 UBE2Q2LH0YL09 131 aa18.54■□□□□ 0.56
SHOX2-202ENST00000425436 USP2O75604 605 aaPredicted RBP18.54■□□□□ 0.56
SHOX2-202ENST00000425436 POLR3DP05423 398 aaPredicted RBP18.54■□□□□ 0.56
SHOX2-202ENST00000425436 GNAT2P19087 354 aa18.54■□□□□ 0.56
SHOX2-202ENST00000425436 PLCD1P51178 756 aa18.54■□□□□ 0.56
SHOX2-202ENST00000425436 DHX36Q9H2U1 1008 aaKnown RBP18.54■□□□□ 0.56
SHOX2-202ENST00000425436 ANGEL1Q9UNK9 670 aaKnown RBP18.54■□□□□ 0.56
SHOX2-202ENST00000425436 ATRNL1Q5VV63 1379 aa18.53■□□□□ 0.56
SHOX2-202ENST00000425436 RPAP1Q9BWH6 1393 aaPredicted RBP18.53■□□□□ 0.56
SHOX2-202ENST00000425436 USP17L12C9JPN9 530 aa18.53■□□□□ 0.56
SHOX2-202ENST00000425436 USP17L21D6R901 530 aa18.53■□□□□ 0.56
SHOX2-202ENST00000425436 SMIM22K7EJ46 135 aa18.53■□□□□ 0.56
SHOX2-202ENST00000425436 FOXP2O15409 715 aa18.53■□□□□ 0.56
SHOX2-202ENST00000425436 PPP1R12BO60237 982 aaPredicted RBP18.53■□□□□ 0.56
SHOX2-202ENST00000425436 DDIT3P35638 169 aa18.53■□□□□ 0.56
SHOX2-202ENST00000425436 IFNL3Q8IZI9 196 aa18.53■□□□□ 0.56
SHOX2-202ENST00000425436 EPB41L4AQ9HCS5 686 aaPredicted RBP18.53■□□□□ 0.56
SHOX2-202ENST00000425436 PI4KBQ9UBF8 816 aa18.53■□□□□ 0.56
SHOX2-202ENST00000425436 ABT1Q9ULW3 272 aaKnown RBP18.53■□□□□ 0.56
SHOX2-202ENST00000425436 NEK4P51957 841 aa18.52■□□□□ 0.56
SHOX2-202ENST00000425436 CTR9Q6PD62 1173 aa18.52■□□□□ 0.56
SHOX2-202ENST00000425436 SPRYD3Q8NCJ5 442 aa18.52■□□□□ 0.56
SHOX2-202ENST00000425436 CD2BP2O95400 341 aaKnown RBP18.51■□□□□ 0.55
SHOX2-202ENST00000425436 HLA-DOAP06340 250 aa18.51■□□□□ 0.55
SHOX2-202ENST00000425436 HSPD1P10809 573 aaKnown RBP18.51■□□□□ 0.55
SHOX2-202ENST00000425436 TDO2P48775 406 aa18.51■□□□□ 0.55
SHOX2-202ENST00000425436 TTC6Q86TZ1 520 aa18.51■□□□□ 0.55
SHOX2-202ENST00000425436 KCNB2Q92953 911 aa18.51■□□□□ 0.55
SHOX2-202ENST00000425436 HOOK2Q96ED9 719 aa18.51■□□□□ 0.55
SHOX2-202ENST00000425436 SIPA1L1O43166 1804 aa18.51■□□□□ 0.55
SHOX2-202ENST00000425436 MINDY4BA8MYZ0 360 aa18.5■□□□□ 0.55
SHOX2-202ENST00000425436 ZKSCAN1P17029 563 aaPredicted RBP18.5■□□□□ 0.55
SHOX2-202ENST00000425436 HSPA6P17066 643 aa18.5■□□□□ 0.55
SHOX2-202ENST00000425436 DCAF15Q66K64 600 aa18.5■□□□□ 0.55
SHOX2-202ENST00000425436 ARMC9Q7Z3E5 817 aa18.5■□□□□ 0.55
SHOX2-202ENST00000425436 SAPCD2Q86UD0 394 aa18.5■□□□□ 0.55
SHOX2-202ENST00000425436 STK11IPQ8N1F8 1099 aa18.5■□□□□ 0.55
SHOX2-202ENST00000425436 NACAP1Q9BZK3 213 aa18.5■□□□□ 0.55
SHOX2-202ENST00000425436 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.5■□□□□ 0.55
SHOX2-202ENST00000425436 CREBZFQ9NS37 354 aa18.5■□□□□ 0.55
SHOX2-202ENST00000425436 COL2A1P02458 1487 aaPredicted RBP18.5■□□□□ 0.55
SHOX2-202ENST00000425436 DDX60LQ5H9U9 1706 aaKnown RBP18.5■□□□□ 0.55
SHOX2-202ENST00000425436 HUNKP57058 714 aa18.49■□□□□ 0.55
SHOX2-202ENST00000425436 RNF20Q5VTR2 975 aa18.49■□□□□ 0.55
SHOX2-202ENST00000425436 GIMAP6Q6P9H5 292 aa18.49■□□□□ 0.55
SHOX2-202ENST00000425436 FOXP4Q8IVH2 680 aaPredicted RBP18.49■□□□□ 0.55
SHOX2-202ENST00000425436 CRACR2BQ8N4Y2 399 aaPredicted RBP18.49■□□□□ 0.55
SHOX2-202ENST00000425436 KLRG1Q96E93 195 aa18.49■□□□□ 0.55
SHOX2-202ENST00000425436 DYNLL2Q96FJ2 89 aa18.49■□□□□ 0.55
SHOX2-202ENST00000425436 ZNF341Q9BYN7 854 aa18.49■□□□□ 0.55
SHOX2-202ENST00000425436 TM6SF1Q9BZW5 370 aa18.49■□□□□ 0.55
SHOX2-202ENST00000425436 NAPBQ9H115 298 aa18.49■□□□□ 0.55
SHOX2-202ENST00000425436 TLL2Q9Y6L7 1015 aa18.49■□□□□ 0.55
SHOX2-202ENST00000425436 FGAP02671 866 aa18.49■□□□□ 0.55
SHOX2-202ENST00000425436 IREB2P48200 963 aaKnown RBP18.49■□□□□ 0.55
SHOX2-202ENST00000425436 FKBP1BP68106 108 aa18.49■□□□□ 0.55
SHOX2-202ENST00000425436 C12orf60Q5U649 245 aa18.49■□□□□ 0.55
SHOX2-202ENST00000425436 MAP4K1Q92918 833 aa18.49■□□□□ 0.55
SHOX2-202ENST00000425436 ZKSCAN4Q969J2 545 aaPredicted RBP18.49■□□□□ 0.55
SHOX2-202ENST00000425436 WRNIP1Q96S55 665 aa18.49■□□□□ 0.55
SHOX2-202ENST00000425436 TRIM34Q9BYJ4 488 aa18.49■□□□□ 0.55
SHOX2-202ENST00000425436 PAPPA2Q9BXP8 1791 aa18.49■□□□□ 0.55
SHOX2-202ENST00000425436 PHF20L1A8MW92 1017 aa18.48■□□□□ 0.55
SHOX2-202ENST00000425436 TBC1D12O60347 775 aa18.48■□□□□ 0.55
SHOX2-202ENST00000425436 INPP5BP32019 993 aa18.48■□□□□ 0.55
SHOX2-202ENST00000425436 MAP3K10Q02779 954 aa18.48■□□□□ 0.55
SHOX2-202ENST00000425436 MAP3K11Q16584 847 aa18.48■□□□□ 0.55
SHOX2-202ENST00000425436 AMOTL1Q8IY63 956 aa18.48■□□□□ 0.55
SHOX2-202ENST00000425436 CLMNQ96JQ2 1002 aa18.48■□□□□ 0.55
SHOX2-202ENST00000425436 DNAJC18Q9H819 358 aa18.48■□□□□ 0.55
SHOX2-202ENST00000425436 SERPINB13Q9UIV8 391 aa18.48■□□□□ 0.55
SHOX2-202ENST00000425436 MAP3K9P80192 1104 aa18.47■□□□□ 0.55
SHOX2-202ENST00000425436 NUCB2P80303 420 aa18.47■□□□□ 0.55
SHOX2-202ENST00000425436 PTH1RQ03431 593 aa18.47■□□□□ 0.55
SHOX2-202ENST00000425436 RRP1BQ14684 758 aaKnown RBP18.47■□□□□ 0.55
SHOX2-202ENST00000425436 SBK1Q52WX2 424 aa18.47■□□□□ 0.55
SHOX2-202ENST00000425436 LDLRAD1Q5T700 205 aa18.47■□□□□ 0.55
SHOX2-202ENST00000425436 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.47■□□□□ 0.55
SHOX2-202ENST00000425436 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.47■□□□□ 0.55
SHOX2-202ENST00000425436 ARPP21Q9UBL0 812 aaPredicted RBP18.47■□□□□ 0.55
SHOX2-202ENST00000425436 HERC5Q9UII4 1024 aaKnown RBP18.47■□□□□ 0.55
SHOX2-202ENST00000425436 SNX14Q9Y5W7 946 aa18.47■□□□□ 0.55
SHOX2-202ENST00000425436 PTMSP20962 102 aa18.46■□□□□ 0.55
SHOX2-202ENST00000425436 PSMA5P28066 241 aa18.46■□□□□ 0.55
SHOX2-202ENST00000425436 NECTIN1Q15223 517 aa18.46■□□□□ 0.55
SHOX2-202ENST00000425436 ALX1Q15699 326 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms