RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 CEP57L1Q8IYX8 460 aa13.38□□□□□ -0.27
UBR4-207ENST00000425413 FANCBQ8NB91 859 aa13.38□□□□□ -0.27
UBR4-207ENST00000425413 OXER1Q8TDS5 423 aa13.38□□□□□ -0.27
UBR4-207ENST00000425413 TSC1Q92574 1164 aa13.38□□□□□ -0.27
UBR4-207ENST00000425413 ESR2Q92731 530 aa13.38□□□□□ -0.27
UBR4-207ENST00000425413 WNK3Q9BYP7 1800 aa13.37□□□□□ -0.27
UBR4-207ENST00000425413 A0A1W2PQ27 194 aa13.37□□□□□ -0.27
UBR4-207ENST00000425413 A0A1W2PQ64 194 aa13.37□□□□□ -0.27
UBR4-207ENST00000425413 A0A1W2PQD8 194 aa13.37□□□□□ -0.27
UBR4-207ENST00000425413 FMNL1O95466 1100 aaPredicted RBP13.37□□□□□ -0.27
UBR4-207ENST00000425413 DHX40Q8IX18 779 aaKnown RBP13.37□□□□□ -0.27
UBR4-207ENST00000425413 IFNAR1P17181 557 aa13.37□□□□□ -0.27
UBR4-207ENST00000425413 SYKP43405 635 aa13.37□□□□□ -0.27
UBR4-207ENST00000425413 SHC4Q6S5L8 630 aa13.37□□□□□ -0.27
UBR4-207ENST00000425413 PLA2G4DQ86XP0 818 aa13.37□□□□□ -0.27
UBR4-207ENST00000425413 ENAHQ8N8S7 591 aaPredicted RBP13.37□□□□□ -0.27
UBR4-207ENST00000425413 KIAA1468Q9P260 1216 aa13.37□□□□□ -0.27
UBR4-207ENST00000425413 CNTNAP4Q9C0A0 1308 aa13.37□□□□□ -0.27
UBR4-207ENST00000425413 GRIN1Q05586 938 aa13.36□□□□□ -0.27
UBR4-207ENST00000425413 SAFBQ15424 915 aaKnown RBP eCLIP13.36□□□□□ -0.27
UBR4-207ENST00000425413 MEX3CQ5U5Q3 659 aaKnown RBP13.36□□□□□ -0.27
UBR4-207ENST00000425413 FAM196AQ6ZSG2 479 aa13.36□□□□□ -0.27
UBR4-207ENST00000425413 UBE2Q2Q8WVN8 375 aa13.36□□□□□ -0.27
UBR4-207ENST00000425413 NYXQ9GZU5 481 aa13.36□□□□□ -0.27
UBR4-207ENST00000425413 VPS54Q9P1Q0 977 aa13.36□□□□□ -0.27
UBR4-207ENST00000425413 FAM205CA6NFA0 338 aa13.36□□□□□ -0.27
UBR4-207ENST00000425413 PNOCQ13519 176 aa13.36□□□□□ -0.27
UBR4-207ENST00000425413 CTR9Q6PD62 1173 aa13.36□□□□□ -0.27
UBR4-207ENST00000425413 FBXO33Q7Z6M2 555 aa13.36□□□□□ -0.27
UBR4-207ENST00000425413 CRACR2BQ8N4Y2 399 aaPredicted RBP13.36□□□□□ -0.27
UBR4-207ENST00000425413 NSUN4Q96CB9 384 aaKnown RBP13.36□□□□□ -0.27
UBR4-207ENST00000425413 PLEKHA8P1O95397 391 aa13.35□□□□□ -0.27
UBR4-207ENST00000425413 CMA1P23946 247 aa13.35□□□□□ -0.27
UBR4-207ENST00000425413 NFIXQ14938 502 aa13.35□□□□□ -0.27
UBR4-207ENST00000425413 IFIT1BQ5T764 474 aaKnown RBP13.35□□□□□ -0.27
UBR4-207ENST00000425413 NOSTRINQ8IVI9 506 aa13.35□□□□□ -0.27
UBR4-207ENST00000425413 PDILTQ8N807 584 aa13.35□□□□□ -0.27
UBR4-207ENST00000425413 KIAA1524Q8TCG1 905 aa13.35□□□□□ -0.27
UBR4-207ENST00000425413 BCL11BQ9C0K0 894 aaPredicted RBP13.35□□□□□ -0.27
UBR4-207ENST00000425413 AKAP17AQ02040 695 aaKnown RBP13.35□□□□□ -0.27
UBR4-207ENST00000425413 PTPAQ15257 358 aa13.35□□□□□ -0.27
UBR4-207ENST00000425413 ZSCAN10Q96SZ4 725 aaPredicted RBP13.35□□□□□ -0.27
UBR4-207ENST00000425413 CABP5Q9NP86 173 aa13.35□□□□□ -0.27
UBR4-207ENST00000425413 V9GY48 417 aaPredicted RBP13.35□□□□□ -0.27
UBR4-207ENST00000425413 BAZ2BQ9UIF8 2168 aaKnown RBP13.35□□□□□ -0.27
UBR4-207ENST00000425413 MMP1P03956 469 aa13.35□□□□□ -0.27
UBR4-207ENST00000425413 SLC10A5Q5PT55 438 aa13.35□□□□□ -0.27
UBR4-207ENST00000425413 CACTINQ8WUQ7 758 aaKnown RBP13.35□□□□□ -0.27
UBR4-207ENST00000425413 MAP3K14Q99558 947 aa13.35□□□□□ -0.27
UBR4-207ENST00000425413 FOXN1O15353 648 aa13.34□□□□□ -0.27
UBR4-207ENST00000425413 U2AF2P26368 475 aaKnown RBP eCLIP13.34□□□□□ -0.271e-6■■■■■ 27.1
UBR4-207ENST00000425413 TOB1P50616 345 aaPredicted RBP13.34□□□□□ -0.27
UBR4-207ENST00000425413 DIXDC1Q155Q3 683 aa13.34□□□□□ -0.27
UBR4-207ENST00000425413 HSP90AA4PQ58FG1 418 aa13.34□□□□□ -0.27
UBR4-207ENST00000425413 DZIP1Q86YF9 867 aaKnown RBP13.34□□□□□ -0.27
UBR4-207ENST00000425413 PCDHB6Q9Y5E3 794 aa13.34□□□□□ -0.27
UBR4-207ENST00000425413 SMC2O95347 1197 aa13.34□□□□□ -0.27
UBR4-207ENST00000425413 SEC23AQ15436 765 aa13.34□□□□□ -0.27
UBR4-207ENST00000425413 PTPN21Q16825 1174 aa13.34□□□□□ -0.27
UBR4-207ENST00000425413 GLIPR1L2Q4G1C9 344 aa13.34□□□□□ -0.27
UBR4-207ENST00000425413 TRAPPC3LQ5T215 181 aa13.34□□□□□ -0.27
UBR4-207ENST00000425413 NBPF11Q86T75 865 aa13.34□□□□□ -0.27
UBR4-207ENST00000425413 USP17L8P0C7I0 530 aa13.33□□□□□ -0.28
UBR4-207ENST00000425413 LMOD1P29536 600 aaPredicted RBP13.33□□□□□ -0.28
UBR4-207ENST00000425413 GRIK5Q16478 980 aa13.33□□□□□ -0.28
UBR4-207ENST00000425413 LONRF3Q496Y0 759 aa13.33□□□□□ -0.28
UBR4-207ENST00000425413 IQCA1Q86XH1 822 aa13.33□□□□□ -0.28
UBR4-207ENST00000425413 JMYQ8N9B5 988 aa13.33□□□□□ -0.28
UBR4-207ENST00000425413 NAT10Q9H0A0 1025 aaKnown RBP13.33□□□□□ -0.28
UBR4-207ENST00000425413 MCM9Q9NXL9 1143 aa13.33□□□□□ -0.28
UBR4-207ENST00000425413 CCDC196A0A1B0GTZ2 297 aa13.33□□□□□ -0.28
UBR4-207ENST00000425413 DEXIO95424 95 aa13.33□□□□□ -0.28
UBR4-207ENST00000425413 TM4SF1P30408 202 aa13.33□□□□□ -0.28
UBR4-207ENST00000425413 NOM1Q5C9Z4 860 aaKnown RBP13.33□□□□□ -0.28
UBR4-207ENST00000425413 CATIPQ7Z7H3 387 aa13.33□□□□□ -0.28
UBR4-207ENST00000425413 WASF1Q92558 559 aa13.33□□□□□ -0.28
UBR4-207ENST00000425413 SHISA4Q96DD7 197 aa13.33□□□□□ -0.28
UBR4-207ENST00000425413 DCP1AQ9NPI6 582 aaPredicted RBP13.33□□□□□ -0.28
UBR4-207ENST00000425413 C4AP0C0L4 1744 aa13.33□□□□□ -0.28
UBR4-207ENST00000425413 C4BP0C0L5 1744 aa13.33□□□□□ -0.28
UBR4-207ENST00000425413 CICQ96RK0 1608 aaPredicted RBP13.33□□□□□ -0.28
UBR4-207ENST00000425413 GRAMD1CQ8IYS0 662 aa13.32□□□□□ -0.28
UBR4-207ENST00000425413 KLHL34Q8N239 644 aa13.32□□□□□ -0.28
UBR4-207ENST00000425413 TMTC2Q8N394 836 aa13.32□□□□□ -0.28
UBR4-207ENST00000425413 C16orf45Q96MC5 204 aaPredicted RBP13.32□□□□□ -0.28
UBR4-207ENST00000425413 CRNKL1Q9BZJ0 848 aaKnown RBP13.32□□□□□ -0.28
UBR4-207ENST00000425413 LRRC4BQ9NT99 713 aa13.32□□□□□ -0.28
UBR4-207ENST00000425413 CAVIN2O95810 425 aa13.32□□□□□ -0.28
UBR4-207ENST00000425413 RC3H1Q5TC82 1133 aaKnown RBP13.32□□□□□ -0.28
UBR4-207ENST00000425413 CNBD1Q8NA66 436 aa13.32□□□□□ -0.28
UBR4-207ENST00000425413 DYNLL2Q96FJ2 89 aa13.32□□□□□ -0.28
UBR4-207ENST00000425413 ANKRD2Q9GZV1 360 aa13.32□□□□□ -0.28
UBR4-207ENST00000425413 KCNH3Q9ULD8 1083 aa13.32□□□□□ -0.28
UBR4-207ENST00000425413 EARS2Q5JPH6 523 aaKnown RBP13.32□□□□□ -0.28
UBR4-207ENST00000425413 USP49Q70CQ1 688 aa13.32□□□□□ -0.28
UBR4-207ENST00000425413 FNBP4Q8N3X1 1017 aaPredicted RBP13.32□□□□□ -0.28
UBR4-207ENST00000425413 CNNM3Q8NE01 707 aa13.32□□□□□ -0.28
UBR4-207ENST00000425413 STK36Q9NRP7 1315 aa13.31□□□□□ -0.28
UBR4-207ENST00000425413 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.31□□□□□ -0.28
UBR4-207ENST00000425413 TSPY2A6NKD2 308 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms