RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 TRMT44Q8IYL2 757 aaKnown RBP15.09■□□□□ 0.01
HLA-DQB3-203ENST00000425319 CRACR2BQ8N4Y2 399 aaPredicted RBP15.09■□□□□ 0.01
HLA-DQB3-203ENST00000425319 SPATA5Q8NB90 893 aa15.09■□□□□ 0.01
HLA-DQB3-203ENST00000425319 A0A1B0GUL6 1792 aa15.08■□□□□ 0.01
HLA-DQB3-203ENST00000425319 C19orf81C9J6K1 198 aa15.08■□□□□ 0
HLA-DQB3-203ENST00000425319 HMGCRP04035 888 aa15.08■□□□□ 0
HLA-DQB3-203ENST00000425319 ADORA1P30542 326 aa15.08■□□□□ 0
HLA-DQB3-203ENST00000425319 CAP2P40123 477 aa15.08■□□□□ 0
HLA-DQB3-203ENST00000425319 PDE3AQ14432 1141 aa15.08■□□□□ 0
HLA-DQB3-203ENST00000425319 FOXP4Q8IVH2 680 aaPredicted RBP15.08■□□□□ 0
HLA-DQB3-203ENST00000425319 TEX11Q8IYF3 940 aa15.08■□□□□ 0
HLA-DQB3-203ENST00000425319 SLC17A8Q8NDX2 589 aa15.08■□□□□ 0
HLA-DQB3-203ENST00000425319 GINM1Q9NU53 330 aa15.08■□□□□ 0
HLA-DQB3-203ENST00000425319 RPTORQ8N122 1335 aa15.08■□□□□ 0
HLA-DQB3-203ENST00000425319 OTOFQ9HC10 1997 aa15.07■□□□□ 0
HLA-DQB3-203ENST00000425319 GNAI2P04899 355 aa15.07■□□□□ 0
HLA-DQB3-203ENST00000425319 ASNSP08243 561 aa15.07■□□□□ 0
HLA-DQB3-203ENST00000425319 OS9Q13438 667 aaPredicted RBP15.07■□□□□ 0
HLA-DQB3-203ENST00000425319 SH3BP5LQ7L8J4 393 aa15.07■□□□□ 0
HLA-DQB3-203ENST00000425319 UBE2Q1Q7Z7E8 422 aa15.07■□□□□ 0
HLA-DQB3-203ENST00000425319 GTF3C2Q8WUA4 911 aaPredicted RBP15.07■□□□□ 0
HLA-DQB3-203ENST00000425319 PAWRQ96IZ0 340 aaKnown RBP15.07■□□□□ 0
HLA-DQB3-203ENST00000425319 NBPF3Q9H094 633 aa15.07■□□□□ 0
HLA-DQB3-203ENST00000425319 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.07■□□□□ 0
HLA-DQB3-203ENST00000425319 DDX4Q9NQI0 724 aaKnown RBP15.07■□□□□ 0
HLA-DQB3-203ENST00000425319 AK9Q5TCS8 1911 aa15.06■□□□□ 0
HLA-DQB3-203ENST00000425319 GLRX3O76003 335 aaKnown RBP15.06■□□□□ 0
HLA-DQB3-203ENST00000425319 HLA-DOAP06340 250 aa15.06■□□□□ 0
HLA-DQB3-203ENST00000425319 HMGCS2P54868 508 aa15.06■□□□□ 0
HLA-DQB3-203ENST00000425319 TTC39AQ5SRH9 613 aa15.06■□□□□ 0
HLA-DQB3-203ENST00000425319 NAA16Q6N069 864 aaPredicted RBP15.06■□□□□ 0
HLA-DQB3-203ENST00000425319 NUDT12Q9BQG2 462 aa15.06■□□□□ 0
HLA-DQB3-203ENST00000425319 PAK6Q9NQU5 681 aaPredicted RBP15.06■□□□□ 0
HLA-DQB3-203ENST00000425319 HMG20BQ9P0W2 317 aa15.06■□□□□ 0
HLA-DQB3-203ENST00000425319 RHBDL3P58872 404 aa15.05■□□□□ -0
HLA-DQB3-203ENST00000425319 SH3D19Q5HYK7 790 aa15.05■□□□□ -0
HLA-DQB3-203ENST00000425319 CERS3Q8IU89 383 aa15.05■□□□□ -0
HLA-DQB3-203ENST00000425319 GPRC5AQ8NFJ5 357 aa15.05■□□□□ -0
HLA-DQB3-203ENST00000425319 NSUN4Q96CB9 384 aaKnown RBP15.05■□□□□ -0
HLA-DQB3-203ENST00000425319 CDCA7LQ96GN5 454 aa15.05■□□□□ -0
HLA-DQB3-203ENST00000425319 MEIS3Q99687 375 aa15.05■□□□□ -0
HLA-DQB3-203ENST00000425319 CRISPLD2Q9H0B8 497 aa15.05■□□□□ -0
HLA-DQB3-203ENST00000425319 ATRNL1Q5VV63 1379 aa15.04■□□□□ -0
HLA-DQB3-203ENST00000425319 USP17L10C9JJH3 530 aa15.04■□□□□ -0
HLA-DQB3-203ENST00000425319 MAPK4P31152 587 aa15.04■□□□□ -0
HLA-DQB3-203ENST00000425319 MTX1Q13505 466 aa15.04■□□□□ -0
HLA-DQB3-203ENST00000425319 TREML2Q5T2D2 321 aa15.04■□□□□ -0
HLA-DQB3-203ENST00000425319 SOCS4Q8WXH5 440 aa15.04■□□□□ -0
HLA-DQB3-203ENST00000425319 WDR18Q9BV38 432 aa15.04■□□□□ -0
HLA-DQB3-203ENST00000425319 ASCC2Q9H1I8 757 aaPredicted RBP15.04■□□□□ -0
HLA-DQB3-203ENST00000425319 STAP2Q9UGK3 403 aa15.04■□□□□ -0
HLA-DQB3-203ENST00000425319 BACE1P56817 501 aa15.03■□□□□ -0
HLA-DQB3-203ENST00000425319 CCNA1P78396 465 aa15.03■□□□□ -0
HLA-DQB3-203ENST00000425319 TBC1D9Q6ZT07 1266 aa15.03■□□□□ -0
HLA-DQB3-203ENST00000425319 TRMT2AQ8IZ69 625 aaKnown RBP15.03■□□□□ -0
HLA-DQB3-203ENST00000425319 C11orf49Q9H6J7 331 aa15.03■□□□□ -0
HLA-DQB3-203ENST00000425319 FAM196BA6NMK8 535 aa15.02■□□□□ -0
HLA-DQB3-203ENST00000425319 XRCC5P13010 732 aaKnown RBP15.02■□□□□ -0
HLA-DQB3-203ENST00000425319 CYP2B6P20813 491 aa15.02■□□□□ -0
HLA-DQB3-203ENST00000425319 ARID4AP29374 1257 aaPredicted RBP15.02■□□□□ -0
HLA-DQB3-203ENST00000425319 HOXA7P31268 230 aaPredicted RBP15.02■□□□□ -0
HLA-DQB3-203ENST00000425319 BMP8BP34820 402 aa15.02■□□□□ -0
HLA-DQB3-203ENST00000425319 RARSP54136 660 aaKnown RBP15.02■□□□□ -0
HLA-DQB3-203ENST00000425319 CCDC84Q86UT8 332 aaPredicted RBP15.02■□□□□ -0
HLA-DQB3-203ENST00000425319 FRAT1Q92837 279 aaPredicted RBP15.02■□□□□ -0
HLA-DQB3-203ENST00000425319 MORF4L1Q9UBU8 362 aa15.02■□□□□ -0
HLA-DQB3-203ENST00000425319 GPR153Q6NV75 609 aa15.01□□□□□ -0.01
HLA-DQB3-203ENST00000425319 USP17L2Q6R6M4 530 aa15.01□□□□□ -0.01
HLA-DQB3-203ENST00000425319 C7orf61Q8IZ16 206 aa15.01□□□□□ -0.01
HLA-DQB3-203ENST00000425319 TGFBRAP1Q8WUH2 860 aa15.01□□□□□ -0.01
HLA-DQB3-203ENST00000425319 GPR108Q9NPR9 543 aa15.01□□□□□ -0.01
HLA-DQB3-203ENST00000425319 AATFQ9NY61 560 aaKnown RBP eCLIP15.01□□□□□ -0.01
HLA-DQB3-203ENST00000425319 ZKSCAN1P17029 563 aaPredicted RBP15□□□□□ -0.01
HLA-DQB3-203ENST00000425319 RGS2P41220 211 aa15□□□□□ -0.01
HLA-DQB3-203ENST00000425319 USP14P54578 494 aa15□□□□□ -0.01
HLA-DQB3-203ENST00000425319 PPP4CP60510 307 aa15□□□□□ -0.01
HLA-DQB3-203ENST00000425319 MTMR2Q13614 643 aa15□□□□□ -0.01
HLA-DQB3-203ENST00000425319 SH3RF3Q8TEJ3 882 aaPredicted RBP15□□□□□ -0.01
HLA-DQB3-203ENST00000425319 P2RX7Q99572 595 aaKnown RBP15□□□□□ -0.01
HLA-DQB3-203ENST00000425319 CABP5Q9NP86 173 aa15□□□□□ -0.01
HLA-DQB3-203ENST00000425319 GJD2Q9UKL4 321 aa15□□□□□ -0.01
HLA-DQB3-203ENST00000425319 DLL1O00548 723 aa14.99□□□□□ -0.01
HLA-DQB3-203ENST00000425319 USP5P45974 858 aa14.99□□□□□ -0.01
HLA-DQB3-203ENST00000425319 HERVK_113P62684 666 aa14.99□□□□□ -0.01
HLA-DQB3-203ENST00000425319 MFSD14CQ5VZR4 134 aa14.99□□□□□ -0.01
HLA-DQB3-203ENST00000425319 TMED8Q6PL24 325 aaPredicted RBP14.99□□□□□ -0.01
HLA-DQB3-203ENST00000425319 TTC6Q86TZ1 520 aa14.99□□□□□ -0.01
HLA-DQB3-203ENST00000425319 MAPKAPK5Q8IW41 473 aa14.99□□□□□ -0.01
HLA-DQB3-203ENST00000425319 FEZ1Q99689 392 aa14.99□□□□□ -0.01
HLA-DQB3-203ENST00000425319 PRO3102Q9H379 93 aa14.99□□□□□ -0.01
HLA-DQB3-203ENST00000425319 IVNS1ABPQ9Y6Y0 642 aa14.99□□□□□ -0.01
HLA-DQB3-203ENST00000425319 COL2A1P02458 1487 aaPredicted RBP14.99□□□□□ -0.01
HLA-DQB3-203ENST00000425319 PLEKHH3Q7Z736 793 aa14.98□□□□□ -0.01
HLA-DQB3-203ENST00000425319 UBE2OQ9C0C9 1292 aaKnown RBP14.98□□□□□ -0.01
HLA-DQB3-203ENST00000425319 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.98□□□□□ -0.01
HLA-DQB3-203ENST00000425319 PRKAG2Q9UGJ0 569 aa14.98□□□□□ -0.01
HLA-DQB3-203ENST00000425319 OGDHLQ9ULD0 1010 aa14.98□□□□□ -0.01
HLA-DQB3-203ENST00000425319 ZMYND8Q9ULU4 1186 aaPredicted RBP14.98□□□□□ -0.01
HLA-DQB3-203ENST00000425319 RFX7Q2KHR2 1363 aa14.98□□□□□ -0.01
HLA-DQB3-203ENST00000425319 USP17L15C9J2P7 530 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms