RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 ELNP15502 786 aa18.5■□□□□ 0.55
ATG4B-209ENST00000425239 CAP2P40123 477 aa18.5■□□□□ 0.55
ATG4B-209ENST00000425239 JAG1P78504 1218 aa18.5■□□□□ 0.55
ATG4B-209ENST00000425239 SPP2Q13103 211 aa18.5■□□□□ 0.55
ATG4B-209ENST00000425239 ATF7IPQ6VMQ6 1270 aa18.5■□□□□ 0.55
ATG4B-209ENST00000425239 PROCA1Q8NCQ7 364 aaPredicted RBP18.5■□□□□ 0.55
ATG4B-209ENST00000425239 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.5■□□□□ 0.55
ATG4B-209ENST00000425239 LOC285556D6RIA3 1793 aa18.5■□□□□ 0.55
ATG4B-209ENST00000425239 LDHCP07864 332 aa18.49■□□□□ 0.55
ATG4B-209ENST00000425239 UBXN2AP68543 259 aa18.49■□□□□ 0.55
ATG4B-209ENST00000425239 POLA2Q14181 598 aa18.49■□□□□ 0.55
ATG4B-209ENST00000425239 SH3D19Q5HYK7 790 aa18.49■□□□□ 0.55
ATG4B-209ENST00000425239 METTL16Q86W50 562 aaKnown RBP18.49■□□□□ 0.55
ATG4B-209ENST00000425239 ANKRD13CQ8N6S4 541 aa18.49■□□□□ 0.55
ATG4B-209ENST00000425239 PAK6Q9NQU5 681 aaPredicted RBP18.49■□□□□ 0.55
ATG4B-209ENST00000425239 GJD2Q9UKL4 321 aa18.49■□□□□ 0.55
ATG4B-209ENST00000425239 ATAD5Q96QE3 1844 aa18.49■□□□□ 0.55
ATG4B-209ENST00000425239 COL6A3P12111 3177 aa18.48■□□□□ 0.55
ATG4B-209ENST00000425239 PPP4CP60510 307 aa18.48■□□□□ 0.55
ATG4B-209ENST00000425239 GSTO1P78417 241 aa18.48■□□□□ 0.55
ATG4B-209ENST00000425239 FAM110CQ1W6H9 321 aa18.48■□□□□ 0.55
ATG4B-209ENST00000425239 CHRDL2Q6WN34 429 aa18.48■□□□□ 0.55
ATG4B-209ENST00000425239 ADGRA1Q86SQ6 560 aa18.48■□□□□ 0.55
ATG4B-209ENST00000425239 ZNF280CQ8ND82 737 aa18.48■□□□□ 0.55
ATG4B-209ENST00000425239 SH3RF3Q8TEJ3 882 aaPredicted RBP18.48■□□□□ 0.55
ATG4B-209ENST00000425239 DPF3Q92784 378 aa18.48■□□□□ 0.55
ATG4B-209ENST00000425239 CRISPLD2Q9H0B8 497 aa18.48■□□□□ 0.55
ATG4B-209ENST00000425239 GPR108Q9NPR9 543 aa18.48■□□□□ 0.55
ATG4B-209ENST00000425239 RBM27Q9P2N5 1060 aaKnown RBP18.48■□□□□ 0.55
ATG4B-209ENST00000425239 BIN2Q9UBW5 565 aaPredicted RBP18.48■□□□□ 0.55
ATG4B-209ENST00000425239 TNPO2O14787 897 aaKnown RBP18.47■□□□□ 0.55
ATG4B-209ENST00000425239 IPO8O15397 1037 aaKnown RBP18.47■□□□□ 0.55
ATG4B-209ENST00000425239 INHAP05111 366 aa18.47■□□□□ 0.55
ATG4B-209ENST00000425239 SMCR8Q8TEV9 937 aaPredicted RBP18.47■□□□□ 0.55
ATG4B-209ENST00000425239 DNAJC18Q9H819 358 aa18.47■□□□□ 0.55
ATG4B-209ENST00000425239 RAI14Q9P0K7 980 aa18.47■□□□□ 0.55
ATG4B-209ENST00000425239 CDK5RAP2Q96SN8 1893 aa18.46■□□□□ 0.55
ATG4B-209ENST00000425239 MYO5AQ9Y4I1 1855 aaKnown RBP18.46■□□□□ 0.55
ATG4B-209ENST00000425239 CYP2E1P05181 493 aaPredicted RBP18.46■□□□□ 0.55
ATG4B-209ENST00000425239 G3BP1Q13283 466 aaKnown RBP eCLIP18.46■□□□□ 0.55
ATG4B-209ENST00000425239 SSH3Q8TE77 659 aa18.46■□□□□ 0.55
ATG4B-209ENST00000425239 CLUAP1Q96AJ1 413 aa18.46■□□□□ 0.55
ATG4B-209ENST00000425239 PLXNB2O15031 1838 aa18.46■□□□□ 0.55
ATG4B-209ENST00000425239 UQCRFS1P1P0C7P4 283 aa18.45■□□□□ 0.54
ATG4B-209ENST00000425239 HMGCS2P54868 508 aa18.45■□□□□ 0.54
ATG4B-209ENST00000425239 GORABQ5T7V8 394 aa18.45■□□□□ 0.54
ATG4B-209ENST00000425239 TEX11Q8IYF3 940 aa18.45■□□□□ 0.54
ATG4B-209ENST00000425239 TMEM57Q8N5G2 664 aa18.45■□□□□ 0.54
ATG4B-209ENST00000425239 ZNF512BQ96KM6 892 aaPredicted RBP18.45■□□□□ 0.54
ATG4B-209ENST00000425239 WDR18Q9BV38 432 aa18.45■□□□□ 0.54
ATG4B-209ENST00000425239 TBC1D2Q9BYX2 928 aa18.45■□□□□ 0.54
ATG4B-209ENST00000425239 ASCC2Q9H1I8 757 aaPredicted RBP18.45■□□□□ 0.54
ATG4B-209ENST00000425239 SNRKQ9NRH2 765 aa18.45■□□□□ 0.54
ATG4B-209ENST00000425239 PI4KBQ9UBF8 816 aa18.45■□□□□ 0.54
ATG4B-209ENST00000425239 HERC5Q9UII4 1024 aaKnown RBP18.45■□□□□ 0.54
ATG4B-209ENST00000425239 USP17L5A8MUK1 530 aa18.44■□□□□ 0.54
ATG4B-209ENST00000425239 ZBTB7BO15156 539 aaPredicted RBP18.44■□□□□ 0.54
ATG4B-209ENST00000425239 FARP2O94887 1054 aaPredicted RBP18.44■□□□□ 0.54
ATG4B-209ENST00000425239 CAPN2P17655 700 aa18.44■□□□□ 0.54
ATG4B-209ENST00000425239 GCLCP48506 637 aaPredicted RBP18.44■□□□□ 0.54
ATG4B-209ENST00000425239 ATP8B2P98198 1209 aa18.44■□□□□ 0.54
ATG4B-209ENST00000425239 SHROOM1Q2M3G4 852 aaPredicted RBP18.44■□□□□ 0.54
ATG4B-209ENST00000425239 TNNI3KQ59H18 835 aa18.44■□□□□ 0.54
ATG4B-209ENST00000425239 POTEEQ6S8J3 1075 aa18.44■□□□□ 0.54
ATG4B-209ENST00000425239 FRAT1Q92837 279 aaPredicted RBP18.44■□□□□ 0.54
ATG4B-209ENST00000425239 DEFB118Q96PH6 123 aa18.44■□□□□ 0.54
ATG4B-209ENST00000425239 DBNDD2Q9BQY9 259 aa18.44■□□□□ 0.54
ATG4B-209ENST00000425239 HTATIP2Q9BUP3 242 aa18.44■□□□□ 0.54
ATG4B-209ENST00000425239 AATFQ9NY61 560 aaKnown RBP eCLIP18.44■□□□□ 0.54
ATG4B-209ENST00000425239 LRP2BPQ9P2M1 347 aa18.44■□□□□ 0.54
ATG4B-209ENST00000425239 FPGT-TNNI3KV9GXZ4 949 aa18.44■□□□□ 0.54
ATG4B-209ENST00000425239 FOCADQ5VW36 1801 aa18.44■□□□□ 0.54
ATG4B-209ENST00000425239 HOXA7P31268 230 aaPredicted RBP18.43■□□□□ 0.54
ATG4B-209ENST00000425239 MNX1P50219 401 aaPredicted RBP18.43■□□□□ 0.54
ATG4B-209ENST00000425239 COA7Q96BR5 231 aa18.43■□□□□ 0.54
ATG4B-209ENST00000425239 DHX36Q9H2U1 1008 aaKnown RBP18.43■□□□□ 0.54
ATG4B-209ENST00000425239 MORF4L1Q9UBU8 362 aa18.43■□□□□ 0.54
ATG4B-209ENST00000425239 PNMA3Q9UL41 463 aa18.43■□□□□ 0.54
ATG4B-209ENST00000425239 ALPK3Q96L96 1907 aa18.43■□□□□ 0.54
ATG4B-209ENST00000425239 BACE1P56817 501 aa18.42■□□□□ 0.54
ATG4B-209ENST00000425239 FOXP4Q8IVH2 680 aaPredicted RBP18.42■□□□□ 0.54
ATG4B-209ENST00000425239 TGFBRAP1Q8WUH2 860 aa18.42■□□□□ 0.54
ATG4B-209ENST00000425239 NOP58Q9Y2X3 529 aaKnown RBP18.42■□□□□ 0.54
ATG4B-209ENST00000425239 DNAH12Q6ZR08 3092 aa18.41■□□□□ 0.54
ATG4B-209ENST00000425239 PEX10O60683 326 aa18.41■□□□□ 0.54
ATG4B-209ENST00000425239 TFRCP02786 760 aaKnown RBP18.41■□□□□ 0.54
ATG4B-209ENST00000425239 TRIM32Q13049 653 aa18.41■□□□□ 0.54
ATG4B-209ENST00000425239 NAA16Q6N069 864 aaPredicted RBP18.41■□□□□ 0.54
ATG4B-209ENST00000425239 P2RX7Q99572 595 aaKnown RBP18.41■□□□□ 0.54
ATG4B-209ENST00000425239 PIH1D3Q9NQM4 214 aaKnown RBP18.41■□□□□ 0.54
ATG4B-209ENST00000425239 PALD1Q9ULE6 856 aa18.41■□□□□ 0.54
ATG4B-209ENST00000425239 FLT1P17948 1338 aa18.41■□□□□ 0.54
ATG4B-209ENST00000425239 ZAP70P43403 619 aa18.4■□□□□ 0.54
ATG4B-209ENST00000425239 MAPKAPK5Q8IW41 473 aa18.4■□□□□ 0.54
ATG4B-209ENST00000425239 PAWRQ96IZ0 340 aaKnown RBP18.4■□□□□ 0.54
ATG4B-209ENST00000425239 TXNRD2Q9NNW7 524 aa18.4■□□□□ 0.54
ATG4B-209ENST00000425239 RBPJLQ9UBG7 517 aa18.4■□□□□ 0.54
ATG4B-209ENST00000425239 DBNLQ9UJU6 430 aaKnown RBP18.4■□□□□ 0.54
ATG4B-209ENST00000425239 MAST2Q6P0Q8 1798 aa18.4■□□□□ 0.54
ATG4B-209ENST00000425239 IGSF3O75054 1194 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms