RNA–Protein interactions for RNA: ENST00000424555.5

SEMA3A-203, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-203ENST00000424555 NCAPD2Q15021 1401 aa8.6□□□□□ -1.03
SEMA3A-203ENST00000424555 MED1Q15648 1581 aaPredicted RBP8.6□□□□□ -1.03
SEMA3A-203ENST00000424555 FMN2Q9NZ56 1722 aa8.6□□□□□ -1.03
SEMA3A-203ENST00000424555 USP42Q9H9J4 1324 aaKnown RBP8.59□□□□□ -1.03
SEMA3A-203ENST00000424555 M0R2N6 131 aa8.59□□□□□ -1.03
SEMA3A-203ENST00000424555 EIF4A1P60842 406 aaKnown RBP8.59□□□□□ -1.03
SEMA3A-203ENST00000424555 ILDR2Q71H61 639 aa8.59□□□□□ -1.03
SEMA3A-203ENST00000424555 FNBP4Q8N3X1 1017 aaPredicted RBP8.59□□□□□ -1.03
SEMA3A-203ENST00000424555 LARGE2Q8N3Y3 721 aa8.59□□□□□ -1.03
SEMA3A-203ENST00000424555 PPP1R9BQ96SB3 815 aa8.59□□□□□ -1.03
SEMA3A-203ENST00000424555 CHMP4AQ9BY43 222 aa8.59□□□□□ -1.03
SEMA3A-203ENST00000424555 ANKIB1Q9P2G1 1089 aa8.59□□□□□ -1.03
SEMA3A-203ENST00000424555 MKRN1Q9UHC7 482 aaKnown RBP8.59□□□□□ -1.03
SEMA3A-203ENST00000424555 HEG1Q9ULI3 1381 aa8.59□□□□□ -1.03
SEMA3A-203ENST00000424555 ADGRL3Q9HAR2 1447 aa8.58□□□□□ -1.04
SEMA3A-203ENST00000424555 ATP9BO43861 1147 aa8.58□□□□□ -1.04
SEMA3A-203ENST00000424555 SELPP16109 830 aa8.58□□□□□ -1.04
SEMA3A-203ENST00000424555 MX1P20591 662 aa8.58□□□□□ -1.04
SEMA3A-203ENST00000424555 ATP1A2P50993 1020 aa8.58□□□□□ -1.04
SEMA3A-203ENST00000424555 MTX1Q13505 466 aa8.58□□□□□ -1.04
SEMA3A-203ENST00000424555 SLC4A10Q6U841 1118 aa8.58□□□□□ -1.04
SEMA3A-203ENST00000424555 BHMTQ93088 406 aa8.58□□□□□ -1.04
SEMA3A-203ENST00000424555 INTS4Q96HW7 963 aaKnown RBP8.58□□□□□ -1.04
SEMA3A-203ENST00000424555 LMTK3Q96Q04 1460 aa8.57□□□□□ -1.04
SEMA3A-203ENST00000424555 CACNA1FO60840 1977 aa8.57□□□□□ -1.04
SEMA3A-203ENST00000424555 KRTAP9-6A0A140TA67 174 aa8.57□□□□□ -1.04
SEMA3A-203ENST00000424555 PALM3A6NDB9 673 aaPredicted RBP8.57□□□□□ -1.04
SEMA3A-203ENST00000424555 GOLGA6L22H0YM25 854 aa8.57□□□□□ -1.04
SEMA3A-203ENST00000424555 HSP90AA1P07900 732 aaKnown RBP8.57□□□□□ -1.04
SEMA3A-203ENST00000424555 FKBP5Q13451 457 aaPredicted RBP8.57□□□□□ -1.04
SEMA3A-203ENST00000424555 BEND3Q5T5X7 828 aa8.57□□□□□ -1.04
SEMA3A-203ENST00000424555 NBPF6Q5VWK0 638 aa8.57□□□□□ -1.04
SEMA3A-203ENST00000424555 SIX5Q8N196 739 aa8.57□□□□□ -1.04
SEMA3A-203ENST00000424555 ABTB2Q8N961 1025 aa8.57□□□□□ -1.04
SEMA3A-203ENST00000424555 NBPF4Q96M43 638 aa8.57□□□□□ -1.04
SEMA3A-203ENST00000424555 EXOC6BQ9Y2D4 811 aa8.57□□□□□ -1.04
SEMA3A-203ENST00000424555 LRRFIP2Q9Y608 721 aaKnown RBP8.57□□□□□ -1.04
SEMA3A-203ENST00000424555 NFAT5O94916 1531 aa8.57□□□□□ -1.04
SEMA3A-203ENST00000424555 N4BP2Q86UW6 1770 aaPredicted RBP8.57□□□□□ -1.04
SEMA3A-203ENST00000424555 TUBGCP6Q96RT7 1819 aa8.57□□□□□ -1.04
SEMA3A-203ENST00000424555 OVOS2A0A0G2JMS6 1433 aa8.56□□□□□ -1.04
SEMA3A-203ENST00000424555 PHRF1Q9P1Y6 1649 aaKnown RBP8.56□□□□□ -1.04
SEMA3A-203ENST00000424555 PPP1R12BO60237 982 aaPredicted RBP8.56□□□□□ -1.04
SEMA3A-203ENST00000424555 BRD1O95696 1058 aa8.56□□□□□ -1.04
SEMA3A-203ENST00000424555 PKP1Q13835 747 aa8.56□□□□□ -1.04
SEMA3A-203ENST00000424555 BTLAQ7Z6A9 289 aa8.56□□□□□ -1.04
SEMA3A-203ENST00000424555 ALDH16A1Q8IZ83 802 aa8.56□□□□□ -1.04
SEMA3A-203ENST00000424555 CCDC82Q8N4S0 544 aa8.56□□□□□ -1.04
SEMA3A-203ENST00000424555 ZGPATQ8N5A5 531 aaKnown RBP8.56□□□□□ -1.04
SEMA3A-203ENST00000424555 PI4K2BQ8TCG2 481 aa8.56□□□□□ -1.04
SEMA3A-203ENST00000424555 TMX3Q96JJ7 454 aa8.56□□□□□ -1.04
SEMA3A-203ENST00000424555 C2orf49Q9BVC5 232 aaPredicted RBP8.56□□□□□ -1.04
SEMA3A-203ENST00000424555 RGPD8O14715 1765 aaPredicted RBP8.56□□□□□ -1.04
SEMA3A-203ENST00000424555 MST1RQ04912 1400 aa8.55□□□□□ -1.04
SEMA3A-203ENST00000424555 A0A0A0MRY4 1105 aa8.55□□□□□ -1.04
SEMA3A-203ENST00000424555 HSPA4P34932 840 aa8.55□□□□□ -1.04
SEMA3A-203ENST00000424555 ADGRE1Q14246 886 aa8.55□□□□□ -1.04
SEMA3A-203ENST00000424555 AKAP4Q5JQC9 854 aa8.55□□□□□ -1.04
SEMA3A-203ENST00000424555 PRSS36Q5K4E3 855 aa8.55□□□□□ -1.04
SEMA3A-203ENST00000424555 TRAPPC3LQ5T215 181 aa8.55□□□□□ -1.04
SEMA3A-203ENST00000424555 PPP1R42Q7Z4L9 355 aa8.55□□□□□ -1.04
SEMA3A-203ENST00000424555 ARHGEF25Q86VW2 580 aa8.55□□□□□ -1.04
SEMA3A-203ENST00000424555 UNC5CLQ8IV45 518 aa8.55□□□□□ -1.04
SEMA3A-203ENST00000424555 KCNH5Q8NCM2 988 aa8.55□□□□□ -1.04
SEMA3A-203ENST00000424555 KCNB2Q92953 911 aa8.55□□□□□ -1.04
SEMA3A-203ENST00000424555 CCDC97Q96F63 343 aaPredicted RBP8.55□□□□□ -1.04
SEMA3A-203ENST00000424555 ZNF594Q96JF6 807 aaPredicted RBP8.55□□□□□ -1.04
SEMA3A-203ENST00000424555 PHAXQ9H814 394 aaKnown RBP8.55□□□□□ -1.04
SEMA3A-203ENST00000424555 LGR6Q9HBX8 967 aa8.55□□□□□ -1.04
SEMA3A-203ENST00000424555 PALD1Q9ULE6 856 aa8.55□□□□□ -1.04
SEMA3A-203ENST00000424555 SLC6A14Q9UN76 642 aa8.55□□□□□ -1.04
SEMA3A-203ENST00000424555 FAM208AQ9UK61 1670 aaKnown RBP8.55□□□□□ -1.04
SEMA3A-203ENST00000424555 SGSM2O43147 1006 aa8.54□□□□□ -1.04
SEMA3A-203ENST00000424555 LILRB5O75023 590 aa8.54□□□□□ -1.04
SEMA3A-203ENST00000424555 UBTFL1P0CB47 393 aaPredicted RBP8.54□□□□□ -1.04
SEMA3A-203ENST00000424555 GRNP28799 593 aaKnown RBP8.54□□□□□ -1.04
SEMA3A-203ENST00000424555 NEK4P51957 841 aa8.54□□□□□ -1.04
SEMA3A-203ENST00000424555 MBTPS1Q14703 1052 aa8.54□□□□□ -1.04
SEMA3A-203ENST00000424555 STAG2Q8N3U4 1231 aa8.54□□□□□ -1.04
SEMA3A-203ENST00000424555 NACC1Q96RE7 527 aa8.54□□□□□ -1.04
SEMA3A-203ENST00000424555 GSX2Q9BZM3 304 aa8.54□□□□□ -1.04
SEMA3A-203ENST00000424555 DMGDHQ9UI17 866 aaKnown RBP8.54□□□□□ -1.04
SEMA3A-203ENST00000424555 BCS1LQ9Y276 419 aa8.54□□□□□ -1.04
SEMA3A-203ENST00000424555 DDX49Q9Y6V7 483 aaKnown RBP8.54□□□□□ -1.04
SEMA3A-203ENST00000424555 UTYO14607 1347 aa8.54□□□□□ -1.04
SEMA3A-203ENST00000424555 ADCY9O60503 1353 aa8.53□□□□□ -1.04
SEMA3A-203ENST00000424555 KCNQ3O43525 872 aa8.53□□□□□ -1.04
SEMA3A-203ENST00000424555 ALDH1L1O75891 902 aa8.53□□□□□ -1.04
SEMA3A-203ENST00000424555 MCCP23508 829 aa8.53□□□□□ -1.04
SEMA3A-203ENST00000424555 AMOTQ4VCS5 1084 aa8.53□□□□□ -1.04
SEMA3A-203ENST00000424555 PLEKHO1Q53GL0 409 aaPredicted RBP8.53□□□□□ -1.04
SEMA3A-203ENST00000424555 HS1BP3Q53T59 392 aa8.53□□□□□ -1.04
SEMA3A-203ENST00000424555 HSP90AB4PQ58FF6 505 aa8.53□□□□□ -1.04
SEMA3A-203ENST00000424555 MCTP1Q6DN14 999 aa8.53□□□□□ -1.04
SEMA3A-203ENST00000424555 SHISA2Q6UWI4 295 aa8.53□□□□□ -1.04
SEMA3A-203ENST00000424555 ANKLE2Q86XL3 938 aa8.53□□□□□ -1.04
SEMA3A-203ENST00000424555 GPT2Q8TD30 523 aa8.53□□□□□ -1.04
SEMA3A-203ENST00000424555 NUDT8Q8WV74 236 aa8.53□□□□□ -1.04
SEMA3A-203ENST00000424555 SCG3Q8WXD2 468 aaKnown RBP8.53□□□□□ -1.04
SEMA3A-203ENST00000424555 DNAAF4Q8WXU2 420 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms